RNA–Protein interactions for RNA: snR56

snR56, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR56, Length 88 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR56snR56 HIS6P40545 261 aa2.55□□□□□ -2
snR56snR56 ALT2P52892 507 aa2.55□□□□□ -2
snR56snR56 ECM30Q06673 1274 aa2.55□□□□□ -2
snR56snR56 HEM15P16622 393 aa2.54□□□□□ -2
snR56snR56 ERG8P24521 451 aa2.54□□□□□ -2
snR56snR56 ELO1P39540 310 aa2.54□□□□□ -2
snR56snR56 IME4P41833 600 aa2.54□□□□□ -2
snR56snR56 RTT109Q07794 436 aa2.54□□□□□ -2
snR56snR56 PSK2Q08217 1101 aa2.54□□□□□ -2
snR56snR56 PCL1P24867 279 aa2.53□□□□□ -2
snR56snR56 SGF29P25554 259 aa2.53□□□□□ -2
snR56snR56 MRPL36P36531 177 aa2.53□□□□□ -2
snR56snR56 IST3P40565 148 aaPredicted RBP2.53□□□□□ -2
snR56snR56 HAL1Q01766 294 aa2.53□□□□□ -2
snR56snR56 INA17Q02888 182 aa2.53□□□□□ -2
snR56snR56 SLD5Q03406 294 aa2.53□□□□□ -2
snR56snR56 VPS74Q06385 345 aa2.53□□□□□ -2
snR56snR56 ESA1Q08649 445 aa2.53□□□□□ -2
snR56snR56 YBR085C-AO43137 85 aa2.52□□□□□ -2.01
snR56snR56 HIP1P06775 603 aa2.52□□□□□ -2.01
snR56snR56 CHS1P08004 1131 aa2.52□□□□□ -2.01
snR56snR56 PEP5P12868 1029 aa2.52□□□□□ -2.01
snR56snR56 HCS1P34243 683 aa2.52□□□□□ -2.01
snR56snR56 PSD1P39006 500 aa2.52□□□□□ -2.01
snR56snR56 BUD32P53323 261 aa2.52□□□□□ -2.01
snR56snR56 REG1Q00816 1014 aa2.52□□□□□ -2.01
snR56snR56 IRC15Q02733 499 aa2.52□□□□□ -2.01
snR56snR56 YCR007CP25354 239 aa2.51□□□□□ -2.01
snR56snR56 PSF2P40359 213 aa2.51□□□□□ -2.01
snR56snR56 SHR3Q02774 210 aa2.51□□□□□ -2.01
snR56snR56 YCL049CP25577 312 aa2.5□□□□□ -2.01
snR56snR56 PAH1P32567 862 aa2.5□□□□□ -2.01
snR56snR56 MID2P36027 376 aa2.5□□□□□ -2.01
snR56snR56 BUR6P40096 142 aa2.5□□□□□ -2.01
snR56snR56 TMA108P40462 946 aa2.5□□□□□ -2.01
snR56snR56 YFL067WP43537 175 aa2.5□□□□□ -2.01
snR56snR56 GAL1P04385 528 aa2.49□□□□□ -2.01
snR56snR56 CPR4P25334 318 aa2.49□□□□□ -2.01
snR56snR56 VPS4P52917 437 aa2.49□□□□□ -2.01
snR56snR56 DUG3P53871 357 aa2.49□□□□□ -2.01
snR56snR56 MET14Q02196 202 aa2.49□□□□□ -2.01
snR56snR56 TEN1Q07921 160 aa2.49□□□□□ -2.01
snR56snR56 LEU9Q12166 604 aaKnown RBP2.49□□□□□ -2.01
snR56snR56 WTM1Q12363 437 aaKnown RBP2.49□□□□□ -2.01
snR56snR56 BUD5P25300 642 aaPredicted RBP2.48□□□□□ -2.01
snR56snR56 PIM1P36775 1133 aa2.48□□□□□ -2.01
snR56snR56 GWT1P47026 490 aa2.48□□□□□ -2.01
snR56snR56 TAN1P53072 289 aaPredicted RBP2.48□□□□□ -2.01
snR56snR56 TSR1Q07381 788 aaKnown RBP2.48□□□□□ -2.01
snR56snR56 ETT1Q08421 412 aaKnown RBP2.48□□□□□ -2.01
snR56snR56 YKL100CP34248 587 aa2.47□□□□□ -2.01
snR56snR56 YJR154WP47181 346 aa2.47□□□□□ -2.01
snR56snR56 ARC35P53731 342 aaKnown RBP2.47□□□□□ -2.01
snR56snR56 NUS1Q12063 375 aa2.47□□□□□ -2.01
snR56snR56 SDH3P33421 198 aa2.46□□□□□ -2.02
snR56snR56 YKL023WP36103 277 aaKnown RBP2.46□□□□□ -2.02
snR56snR56 IFA38P38286 347 aa2.46□□□□□ -2.02
snR56snR56 YNG2P38806 282 aaKnown RBP2.46□□□□□ -2.02
snR56snR56 RPS7BP48164 190 aaKnown RBP2.46□□□□□ -2.02
snR56snR56 DRN1P53255 507 aaKnown RBP2.46□□□□□ -2.02
snR56snR56 CAF40P53829 373 aa2.46□□□□□ -2.02
snR56snR56 PIR3Q03180 325 aa2.46□□□□□ -2.02
snR56snR56 TFC6Q06339 672 aa2.46□□□□□ -2.02
snR56snR56 LSP1Q12230 341 aaKnown RBP2.46□□□□□ -2.02
snR56snR56 PET123P17558 318 aa2.45□□□□□ -2.02
snR56snR56 PDB1P32473 366 aaKnown RBP2.45□□□□□ -2.02
snR56snR56 DIA3P52290 468 aa2.45□□□□□ -2.02
snR56snR56 TOF1P53840 1238 aa2.45□□□□□ -2.02
snR56snR56 IVY1Q04934 453 aa2.45□□□□□ -2.02
snR56snR56 THP3Q12049 470 aaKnown RBP2.45□□□□□ -2.02
snR56snR56 NCE102Q12207 173 aaRIP-Chip data2.45□□□□□ -2.02not detected
snR56snR56 HSP26P15992 214 aaKnown RBP RIP-Chip data2.44□□□□□ -2.02not detected
snR56snR56 RAD16P31244 790 aa2.44□□□□□ -2.02
snR56snR56 PIL1P53252 339 aaKnown RBP2.44□□□□□ -2.02
snR56snR56 MUB1Q03162 620 aa2.44□□□□□ -2.02
snR56snR56 SUC2P00724 532 aa2.43□□□□□ -2.02
snR56snR56 NUC1P08466 329 aa2.43□□□□□ -2.02
snR56snR56 MTF2P10849 440 aa2.43□□□□□ -2.02
snR56snR56 EXO70P19658 623 aa2.43□□□□□ -2.02
snR56snR56 UBC1P21734 215 aaKnown RBP2.43□□□□□ -2.02
snR56snR56 PTP2P29461 750 aa2.43□□□□□ -2.02
snR56snR56 ELP2P42935 788 aa2.43□□□□□ -2.02
snR56snR56 DSD1P53095 428 aa2.43□□□□□ -2.02
snR56snR56 PEX8P53248 589 aa2.43□□□□□ -2.02
snR56snR56 HRI1Q05905 244 aaKnown RBP2.43□□□□□ -2.02
snR56snR56 SKG3Q06315 1026 aa2.43□□□□□ -2.02
snR56snR56 YOR365CQ08844 703 aa2.43□□□□□ -2.02
snR56snR56 TMA7Q3E764 64 aaKnown RBP2.43□□□□□ -2.02
snR56snR56 YBL111CQ3E7Y5 667 aa2.43□□□□□ -2.02
snR56snR56 BI3Q9ZZW7 517 aa2.43□□□□□ -2.02
snR56snR56 PWP1P21304 576 aaKnown RBP2.42□□□□□ -2.02
snR56snR56 SYN8P31377 255 aa2.42□□□□□ -2.02
snR56snR56 UTR4P32626 227 aa2.42□□□□□ -2.02
snR56snR56 YHL041WP38730 149 aa2.42□□□□□ -2.02
snR56snR56 MSC1Q03104 513 aa2.42□□□□□ -2.02
snR56snR56 ADH7P25377 361 aa2.41□□□□□ -2.02
snR56snR56 SLZ1P40167 298 aa2.41□□□□□ -2.02
snR56snR56 MRPL13Q02204 264 aa2.41□□□□□ -2.02
snR56snR56 RSN1Q03516 953 aa2.41□□□□□ -2.02
snR56snR56 NAT2P37293 288 aa2.4□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 68.1 ms