RNA–Protein interactions for RNA: YOL148C

SPT20, Transcript of Subunit of the SAGA transcriptional regulatory complex, yeastyeast

Gene SPT20, Length 1,815 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT20YOL148C GRS2Q06817 618 aa9.34□□□□□ -0.91
SPT20YOL148C YDL121CQ07541 149 aa9.34□□□□□ -0.91
SPT20YOL148C SNU23Q12368 194 aaPredicted RBP9.34□□□□□ -0.91
SPT20YOL148C PMA1P05030 918 aaKnown RBP9.33□□□□□ -0.92
SPT20YOL148C RAD7P06779 565 aa9.33□□□□□ -0.92
SPT20YOL148C SGV1P23293 657 aaKnown RBP9.33□□□□□ -0.92
SPT20YOL148C DBP2P24783 546 aaKnown RBP9.33□□□□□ -0.92
SPT20YOL148C BUB2P26448 306 aaPredicted RBP9.33□□□□□ -0.92
SPT20YOL148C SYN8P31377 255 aa9.33□□□□□ -0.92
SPT20YOL148C ARP2P32381 391 aaKnown RBP9.33□□□□□ -0.92
SPT20YOL148C SLX5P32828 619 aaKnown RBP9.33□□□□□ -0.92
SPT20YOL148C RIM4P38741 713 aa9.33□□□□□ -0.92
SPT20YOL148C RPT2P40327 437 aaKnown RBP9.33□□□□□ -0.92
SPT20YOL148C YTA6P40328 754 aa9.33□□□□□ -0.92
SPT20YOL148C BUD13P46947 266 aaPredicted RBP9.33□□□□□ -0.92
SPT20YOL148C IRC18P47056 224 aa9.33□□□□□ -0.92
SPT20YOL148C UPF3P48412 387 aaKnown RBP9.33□□□□□ -0.92
SPT20YOL148C CUL3P53202 744 aa9.33□□□□□ -0.92
SPT20YOL148C GTR2P53290 341 aa9.33□□□□□ -0.92
SPT20YOL148C ALG11P53954 548 aaKnown RBP9.33□□□□□ -0.92
SPT20YOL148C PRP38Q00723 242 aaPredicted RBP9.33□□□□□ -0.92
SPT20YOL148C YPL034WQ03083 165 aa9.33□□□□□ -0.92
SPT20YOL148C ERO1Q03103 563 aa9.33□□□□□ -0.92
SPT20YOL148C CBC2Q08920 208 aaKnown RBP RIP-Chip data9.33□□□□□ -0.92not detected
SPT20YOL148C FEX2Q08991 375 aa9.33□□□□□ -0.92
SPT20YOL148C YGK3Q12222 375 aaPredicted RBP9.33□□□□□ -0.92
SPT20YOL148C YPL119C-AQ3E751 87 aa9.33□□□□□ -0.92
SPT20YOL148C LAG2Q92325 660 aa9.33□□□□□ -0.92
SPT20YOL148C HSP26P15992 214 aaKnown RBP RIP-Chip data9.33□□□□□ -0.92not detected
SPT20YOL148C TEF4P36008 412 aaKnown RBP9.33□□□□□ -0.92
SPT20YOL148C MLH1P38920 769 aa9.33□□□□□ -0.92
SPT20YOL148C YJL171CP46992 396 aa9.33□□□□□ -0.92
SPT20YOL148C MTR3P48240 250 aaPredicted RBP9.33□□□□□ -0.92
SPT20YOL148C STB4P50104 949 aa9.33□□□□□ -0.92
SPT20YOL148C YGR127WP53275 312 aa9.33□□□□□ -0.92
SPT20YOL148C SDH1Q00711 640 aa9.33□□□□□ -0.92
SPT20YOL148C NUP49Q02199 472 aa9.33□□□□□ -0.92
SPT20YOL148C TAF12Q03761 539 aa9.33□□□□□ -0.92
SPT20YOL148C NBA1Q08229 501 aaKnown RBP9.33□□□□□ -0.92
SPT20YOL148C MDY2Q12285 212 aa9.33□□□□□ -0.92
SPT20YOL148C PST2Q12335 198 aaKnown RBP9.33□□□□□ -0.92
SPT20YOL148C MOT1P32333 1867 aa9.32□□□□□ -0.92
SPT20YOL148C TUB2P02557 457 aaKnown RBP9.32□□□□□ -0.92
SPT20YOL148C CIN8P27895 1000 aa9.32□□□□□ -0.92
SPT20YOL148C TOD6P34219 525 aa9.32□□□□□ -0.92
SPT20YOL148C STP2P38704 541 aa9.32□□□□□ -0.92
SPT20YOL148C YER034WP40022 185 aaKnown RBP9.32□□□□□ -0.92
SPT20YOL148C YER156CP40093 338 aaKnown RBP9.32□□□□□ -0.92
SPT20YOL148C APS3P47064 194 aa9.32□□□□□ -0.92
SPT20YOL148C YPT32P51996 222 aaKnown RBP9.32□□□□□ -0.92
SPT20YOL148C NQM1P53228 333 aaPredicted RBP9.32□□□□□ -0.92
SPT20YOL148C RMI1Q02685 241 aa9.32□□□□□ -0.92
SPT20YOL148C NGL2Q03264 515 aaKnown RBP9.32□□□□□ -0.92
SPT20YOL148C MAK3Q03503 176 aa9.32□□□□□ -0.92
SPT20YOL148C MLC2Q06580 163 aa9.32□□□□□ -0.92
SPT20YOL148C GSH2Q08220 491 aa9.32□□□□□ -0.92
SPT20YOL148C UAF30Q08747 228 aa9.32□□□□□ -0.92
SPT20YOL148C RRG1Q12167 365 aaPredicted RBP9.32□□□□□ -0.92
SPT20YOL148C YLL058WQ12198 575 aa9.32□□□□□ -0.92
SPT20YOL148C MHF2Q3E829 80 aa9.32□□□□□ -0.92
SPT20YOL148C RAM1P22007 431 aa9.31□□□□□ -0.92
SPT20YOL148C MRPL17P36528 281 aa9.31□□□□□ -0.92
SPT20YOL148C LEU5P38702 357 aa9.31□□□□□ -0.92
SPT20YOL148C NPR2P39923 615 aa9.31□□□□□ -0.92
SPT20YOL148C COA1P40452 197 aa9.31□□□□□ -0.92
SPT20YOL148C RRT5P43607 289 aa9.31□□□□□ -0.92
SPT20YOL148C MDV1P47025 714 aa9.31□□□□□ -0.92
SPT20YOL148C RRT6P53117 311 aaPredicted RBP9.31□□□□□ -0.92
SPT20YOL148C GRX5Q02784 150 aa9.31□□□□□ -0.92
SPT20YOL148C GCN5Q03330 439 aa9.31□□□□□ -0.92
SPT20YOL148C ENT5Q03769 411 aaKnown RBP9.31□□□□□ -0.92
SPT20YOL148C NHX1Q04121 633 aa9.31□□□□□ -0.92
SPT20YOL148C SLD7Q08457 257 aa9.31□□□□□ -0.92
SPT20YOL148C MDM32Q12171 622 aa9.31□□□□□ -0.92
SPT20YOL148C YPL247CQ12523 523 aa9.31□□□□□ -0.92
SPT20YOL148C CDC19P00549 500 aaKnown RBP9.31□□□□□ -0.92
SPT20YOL148C DED1P06634 604 aaKnown RBP9.31□□□□□ -0.92
SPT20YOL148C ERG20P08524 352 aaKnown RBP9.31□□□□□ -0.92
SPT20YOL148C DBP3P20447 523 aaKnown RBP9.31□□□□□ -0.92
SPT20YOL148C HXT2P23585 541 aa9.31□□□□□ -0.92
SPT20YOL148C SDH8P38345 138 aa9.31□□□□□ -0.92
SPT20YOL148C EXO1P39875 702 aa9.31□□□□□ -0.92
SPT20YOL148C HXT9P40885 567 aa9.31□□□□□ -0.92
SPT20YOL148C GYP8P43570 497 aa9.31□□□□□ -0.92
SPT20YOL148C ASG7P46993 209 aa9.31□□□□□ -0.92
SPT20YOL148C YJR154WP47181 346 aa9.31□□□□□ -0.92
SPT20YOL148C TPN1P53099 579 aa9.31□□□□□ -0.92
SPT20YOL148C RSC3Q06639 885 aa9.31□□□□□ -0.92
SPT20YOL148C SHS1Q07657 551 aa9.31□□□□□ -0.92
SPT20YOL148C GUD1Q07729 489 aa9.31□□□□□ -0.92
SPT20YOL148C SLF1Q12034 447 aaKnown RBP9.31□□□□□ -0.92
SPT20YOL148C TIM9O74700 87 aa9.3□□□□□ -0.92
SPT20YOL148C SEC53P07283 254 aaKnown RBP9.3□□□□□ -0.92
SPT20YOL148C MRP2P10663 115 aaPredicted RBP9.3□□□□□ -0.92
SPT20YOL148C YCK2P23292 546 aaKnown RBP9.3□□□□□ -0.92
SPT20YOL148C SGF29P25554 259 aa9.3□□□□□ -0.92
SPT20YOL148C CPR3P25719 182 aa9.3□□□□□ -0.92
SPT20YOL148C ARO7P32178 256 aa9.3□□□□□ -0.92
SPT20YOL148C HYM1P32464 399 aa9.3□□□□□ -0.92
SPT20YOL148C SRP68P38687 599 aaKnown RBP9.3□□□□□ -0.92
Retrieved 100 of 5,963 RNA–protein pairs in 19.8 ms