RNA–Protein interactions for RNA: YMR078C

CTF18, Transcript of Subunit of a complex with Ctf8p, yeastyeast

Gene CTF18, Length 2,226 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF18YMR078C RIM20Q12033 661 aa5.09□□□□□ -1.59
CTF18YMR078C ATG29Q12092 213 aa5.09□□□□□ -1.59
CTF18YMR078C YFL068WP0CX99 160 aa5.09□□□□□ -1.59
CTF18YMR078C YLL066W-AP0CY00 160 aa5.09□□□□□ -1.59
CTF18YMR078C YLL067W-AP0CY01 160 aa5.09□□□□□ -1.59
CTF18YMR078C NFU1P32860 256 aa5.09□□□□□ -1.59
CTF18YMR078C CIN4P39110 191 aa5.09□□□□□ -1.59
CTF18YMR078C FET5P43561 622 aa5.09□□□□□ -1.59
CTF18YMR078C YDR239CQ03780 787 aa5.09□□□□□ -1.59
CTF18YMR078C PDR3P33200 976 aa5.08□□□□□ -1.6
CTF18YMR078C SEC66P33754 206 aa5.08□□□□□ -1.6
CTF18YMR078C PMT1P33775 817 aa5.08□□□□□ -1.6
CTF18YMR078C GPD2P41911 440 aaKnown RBP5.08□□□□□ -1.6
CTF18YMR078C TWF1P53250 332 aa5.08□□□□□ -1.6
CTF18YMR078C YDL057WQ07379 328 aa5.08□□□□□ -1.6
CTF18YMR078C PUF2Q12221 1075 aaKnown RBP RIP-Chip data5.08□□□□□ -1.6not detected
CTF18YMR078C FUR1P18562 216 aaKnown RBP5.08□□□□□ -1.6
CTF18YMR078C MGM1P32266 881 aa5.08□□□□□ -1.6
CTF18YMR078C ASK1P35734 292 aa5.08□□□□□ -1.6
CTF18YMR078C PCL6P40038 420 aa5.08□□□□□ -1.6
CTF18YMR078C PCI8P40512 444 aa5.08□□□□□ -1.6
CTF18YMR078C STB2P46679 850 aa5.08□□□□□ -1.6
CTF18YMR078C BUD32P53323 261 aa5.08□□□□□ -1.6
CTF18YMR078C RDR1Q08904 546 aa5.08□□□□□ -1.6
CTF18YMR078C CMC1P36064 111 aa5.07□□□□□ -1.6
CTF18YMR078C ROT2P38138 954 aa5.07□□□□□ -1.6
CTF18YMR078C YIL152WP40455 235 aa5.07□□□□□ -1.6
CTF18YMR078C MDV1P47025 714 aa5.07□□□□□ -1.6
CTF18YMR078C YVH1Q02256 364 aaKnown RBP5.07□□□□□ -1.6
CTF18YMR078C GIR2Q03768 265 aaPredicted RBP5.07□□□□□ -1.6
CTF18YMR078C TAP42Q04372 366 aa5.07□□□□□ -1.6
CTF18YMR078C MRPL1Q04599 285 aa5.07□□□□□ -1.6
CTF18YMR078C ECI1Q05871 280 aa5.07□□□□□ -1.6
CTF18YMR078C YOR365CQ08844 703 aa5.07□□□□□ -1.6
CTF18YMR078C BSC1Q12140 328 aa5.07□□□□□ -1.6
CTF18YMR078C SAS3P34218 831 aa5.07□□□□□ -1.6
CTF18YMR078C YPK3P38070 525 aa5.07□□□□□ -1.6
CTF18YMR078C EFM2P38347 419 aa5.07□□□□□ -1.6
CTF18YMR078C SNG1P46950 547 aa5.07□□□□□ -1.6
CTF18YMR078C YGR126WP53274 230 aa5.07□□□□□ -1.6
CTF18YMR078C RQC1Q05468 723 aaKnown RBP5.07□□□□□ -1.6
CTF18YMR078C SEC39Q12745 709 aa5.07□□□□□ -1.6
CTF18YMR078C YDL007C-AQ2V2Q0 85 aa5.07□□□□□ -1.6
CTF18YMR078C GID7P25569 745 aa5.06□□□□□ -1.6
CTF18YMR078C BYE1P36106 594 aa5.06□□□□□ -1.6
CTF18YMR078C KEL1P38853 1164 aaKnown RBP5.06□□□□□ -1.6
CTF18YMR078C RTS2P40962 232 aa5.06□□□□□ -1.6
CTF18YMR078C SMM1P53720 384 aaKnown RBP5.06□□□□□ -1.6
CTF18YMR078C YNL234WP53857 426 aa5.06□□□□□ -1.6
CTF18YMR078C TOF2Q02208 771 aa5.06□□□□□ -1.6
CTF18YMR078C YPL014WQ02606 381 aa5.06□□□□□ -1.6
CTF18YMR078C SPC19Q03954 165 aa5.06□□□□□ -1.6
CTF18YMR078C RBS1Q05672 457 aaKnown RBP5.06□□□□□ -1.6
CTF18YMR078C MLH2Q07980 695 aa5.06□□□□□ -1.6
CTF18YMR078C YME1P32795 747 aa5.05□□□□□ -1.6
CTF18YMR078C YHR210CP38893 341 aa5.05□□□□□ -1.6
CTF18YMR078C SCW4P53334 386 aaKnown RBP5.05□□□□□ -1.6
CTF18YMR078C YNL181WP53878 407 aa5.05□□□□□ -1.6
CTF18YMR078C BET4Q00618 327 aa5.05□□□□□ -1.6
CTF18YMR078C DIC1Q06143 298 aa5.05□□□□□ -1.6
CTF18YMR078C APL5Q08951 932 aaKnown RBP5.05□□□□□ -1.6
CTF18YMR078C RAD52P06778 471 aaKnown RBP5.05□□□□□ -1.6
CTF18YMR078C YER130CP39959 443 aa5.05□□□□□ -1.6
CTF18YMR078C YIR016WP40572 265 aa5.05□□□□□ -1.6
CTF18YMR078C DUG3P53871 357 aa5.05□□□□□ -1.6
CTF18YMR078C RPA49Q01080 415 aaPredicted RBP5.05□□□□□ -1.6
CTF18YMR078C ISN1Q99312 450 aa5.05□□□□□ -1.6
CTF18YMR078C RPC53P25441 422 aa5.04□□□□□ -1.6
CTF18YMR078C LAG1P38703 411 aa5.04□□□□□ -1.6
CTF18YMR078C VMA13P41807 478 aaKnown RBP5.04□□□□□ -1.6
CTF18YMR078C SLG1P54867 378 aa5.04□□□□□ -1.6
CTF18YMR078C RHO4Q00246 291 aa5.04□□□□□ -1.6
CTF18YMR078C YDR131CQ03899 556 aa5.04□□□□□ -1.6
CTF18YMR078C CDC45Q08032 650 aa5.04□□□□□ -1.6
CTF18YMR078C UBX3Q12229 455 aa5.04□□□□□ -1.6
CTF18YMR078C PRP2P20095 876 aaPredicted RBP5.04□□□□□ -1.6
CTF18YMR078C BUD14P27637 709 aa5.04□□□□□ -1.6
CTF18YMR078C SPC34P36131 295 aa5.04□□□□□ -1.6
CTF18YMR078C AXL1P40851 1208 aa5.04□□□□□ -1.6
CTF18YMR078C CAF130P53280 1122 aaPredicted RBP5.04□□□□□ -1.6
CTF18YMR078C SMA1Q02651 245 aa5.04□□□□□ -1.6
CTF18YMR078C YMR160WQ03823 816 aa5.04□□□□□ -1.6
CTF18YMR078C PDS5Q04264 1277 aa5.04□□□□□ -1.6
CTF18YMR078C MGR1P25573 417 aa5.03□□□□□ -1.6
CTF18YMR078C SNC1P31109 117 aa5.03□□□□□ -1.6
CTF18YMR078C TIF4631P39935 952 aaKnown RBP5.03□□□□□ -1.6
CTF18YMR078C YMR147WP40218 223 aaKnown RBP5.03□□□□□ -1.6
CTF18YMR078C IAH1P41734 238 aa5.03□□□□□ -1.6
CTF18YMR078C HXT14P42833 540 aa5.03□□□□□ -1.6
CTF18YMR078C YJR154WP47181 346 aa5.03□□□□□ -1.6
CTF18YMR078C YMR034CQ05131 434 aaPredicted RBP5.03□□□□□ -1.6
CTF18YMR078C PEP5P12868 1029 aa5.03□□□□□ -1.6
CTF18YMR078C PHD1P36093 366 aa5.03□□□□□ -1.6
CTF18YMR078C YKL023WP36103 277 aaKnown RBP5.03□□□□□ -1.6
CTF18YMR078C TCM62P38228 572 aaKnown RBP5.03□□□□□ -1.6
CTF18YMR078C ERG7P38604 731 aa5.03□□□□□ -1.6
CTF18YMR078C SPC97P38863 823 aa5.03□□□□□ -1.6
CTF18YMR078C HEF3P53978 1044 aaKnown RBP5.03□□□□□ -1.6
CTF18YMR078C YMR254CQ04838 102 aa5.03□□□□□ -1.6
CTF18YMR078C SFI1Q12369 946 aa5.03□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 49.8 ms