RNA–Protein interactions for RNA: YKR036C

CAF4, Transcript of WD40 repeat-containing protein associated with the CCR4-NOT complex, yeastyeast

Gene CAF4, Length 1,932 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF4YKR036C CGR1P53188 120 aa4.8□□□□□ -1.64
CAF4YKR036C YNL033WP53964 284 aa4.8□□□□□ -1.64
CAF4YKR036C YNL019CP53975 284 aa4.8□□□□□ -1.64
CAF4YKR036C MPS1P54199 764 aa4.8□□□□□ -1.64
CAF4YKR036C TBF1Q02457 562 aa4.8□□□□□ -1.64
CAF4YKR036C YPL068CQ02749 293 aa4.8□□□□□ -1.64
CAF4YKR036C YPL107WQ02873 248 aa4.8□□□□□ -1.64
CAF4YKR036C SNZ1Q03148 297 aa4.8□□□□□ -1.64
CAF4YKR036C YMR209CQ03648 457 aa4.8□□□□□ -1.64
CAF4YKR036C SSY1Q03770 852 aa4.8□□□□□ -1.64
CAF4YKR036C KAP95Q06142 861 aaKnown RBP4.8□□□□□ -1.64
CAF4YKR036C ENT4Q07872 247 aa4.8□□□□□ -1.64
CAF4YKR036C YOL107WQ12239 342 aa4.8□□□□□ -1.64
CAF4YKR036C TPK1P06244 397 aa4.79□□□□□ -1.64
CAF4YKR036C SIR3P06701 978 aa4.79□□□□□ -1.64
CAF4YKR036C CAP2P13517 287 aa4.79□□□□□ -1.64
CAF4YKR036C ENA1P13587 1091 aa4.79□□□□□ -1.64
CAF4YKR036C UBC8P28263 218 aa4.79□□□□□ -1.64
CAF4YKR036C ATP7P30902 174 aa4.79□□□□□ -1.64
CAF4YKR036C PRP21P32524 280 aaPredicted RBP4.79□□□□□ -1.64
CAF4YKR036C TOD6P34219 525 aa4.79□□□□□ -1.64
CAF4YKR036C KTR4P38131 464 aa4.79□□□□□ -1.64
CAF4YKR036C GPX2P38143 162 aa4.79□□□□□ -1.64
CAF4YKR036C ECM8P38246 354 aa4.79□□□□□ -1.64
CAF4YKR036C SRP72P38688 640 aaKnown RBP4.79□□□□□ -1.64
CAF4YKR036C STB5P38699 743 aa4.79□□□□□ -1.64
CAF4YKR036C SBE22P38814 852 aa4.79□□□□□ -1.64
CAF4YKR036C RCY1P39531 840 aa4.79□□□□□ -1.64
CAF4YKR036C SOP4P39543 234 aaPredicted RBP4.79□□□□□ -1.64
CAF4YKR036C NDE1P40215 560 aa4.79□□□□□ -1.64
CAF4YKR036C COS4P43542 379 aa4.79□□□□□ -1.64
CAF4YKR036C TAH11P47112 604 aa4.79□□□□□ -1.64
CAF4YKR036C ACF4P47129 309 aa4.79□□□□□ -1.64
CAF4YKR036C JJJ3P47138 172 aa4.79□□□□□ -1.64
CAF4YKR036C COS1P53822 381 aa4.79□□□□□ -1.64
CAF4YKR036C ENA2Q01896 1091 aa4.79□□□□□ -1.64
CAF4YKR036C NGL2Q03264 515 aaKnown RBP4.79□□□□□ -1.64
CAF4YKR036C SCS7Q03529 384 aa4.79□□□□□ -1.64
CAF4YKR036C YMR010WQ03687 405 aa4.79□□□□□ -1.64
CAF4YKR036C SNU56Q03782 492 aaKnown RBP4.79□□□□□ -1.64
CAF4YKR036C AIM33Q04516 312 aa4.79□□□□□ -1.64
CAF4YKR036C YLR352WQ06479 807 aa4.79□□□□□ -1.64
CAF4YKR036C TRM8Q12009 286 aa4.79□□□□□ -1.64
CAF4YKR036C ULA1Q12059 462 aa4.79□□□□□ -1.64
CAF4YKR036C HFI1Q12060 488 aa4.79□□□□□ -1.64
CAF4YKR036C ENA5Q12691 1091 aa4.79□□□□□ -1.64
CAF4YKR036C PRC1P00729 532 aa4.78□□□□□ -1.64
CAF4YKR036C ILV1P00927 576 aaKnown RBP4.78□□□□□ -1.64
CAF4YKR036C GAL1P04385 528 aa4.78□□□□□ -1.64
CAF4YKR036C DED1P06634 604 aaKnown RBP4.78□□□□□ -1.64
CAF4YKR036C STE3P06783 470 aa4.78□□□□□ -1.64
CAF4YKR036C STE12P13574 688 aa4.78□□□□□ -1.64
CAF4YKR036C NSP1P14907 823 aaKnown RBP4.78□□□□□ -1.64
CAF4YKR036C AMS1P22855 1083 aa4.78□□□□□ -1.64
CAF4YKR036C DMC1P25453 334 aa4.78□□□□□ -1.64
CAF4YKR036C VAC17P25591 423 aa4.78□□□□□ -1.64
CAF4YKR036C CSM1P25651 190 aa4.78□□□□□ -1.64
CAF4YKR036C GUT2P32191 649 aa4.78□□□□□ -1.64
CAF4YKR036C MEI5P32489 222 aa4.78□□□□□ -1.64
CAF4YKR036C MSS1P32559 526 aaPredicted RBP4.78□□□□□ -1.64
CAF4YKR036C KAP122P32767 1081 aa4.78□□□□□ -1.64
CAF4YKR036C MRS6P32864 603 aaKnown RBP4.78□□□□□ -1.64
CAF4YKR036C CBT1P36038 271 aaPredicted RBP4.78□□□□□ -1.64
CAF4YKR036C IMD2P38697 523 aaKnown RBP4.78□□□□□ -1.64
CAF4YKR036C IPI1P38803 334 aaPredicted RBP4.78□□□□□ -1.64
CAF4YKR036C IPT1P38954 527 aa4.78□□□□□ -1.64
CAF4YKR036C SHU2P38957 223 aa4.78□□□□□ -1.64
CAF4YKR036C PLB1P39105 664 aa4.78□□□□□ -1.64
CAF4YKR036C AVT2P39981 480 aa4.78□□□□□ -1.64
CAF4YKR036C YAT2P40017 923 aa4.78□□□□□ -1.64
CAF4YKR036C ARG2P40360 574 aa4.78□□□□□ -1.64
CAF4YKR036C FAF1P40546 346 aaPredicted RBP4.78□□□□□ -1.64
CAF4YKR036C AIM23P47015 356 aa4.78□□□□□ -1.64
CAF4YKR036C ARC35P53731 342 aaKnown RBP4.78□□□□□ -1.64
CAF4YKR036C ECM9Q02202 377 aa4.78□□□□□ -1.64
CAF4YKR036C PET117Q02771 107 aa4.78□□□□□ -1.64
CAF4YKR036C SPO20Q04359 397 aa4.78□□□□□ -1.64
CAF4YKR036C HSP31Q04432 237 aa4.78□□□□□ -1.64
CAF4YKR036C CRR1Q05790 422 aa4.78□□□□□ -1.64
CAF4YKR036C CUE5Q08412 411 aaKnown RBP4.78□□□□□ -1.64
CAF4YKR036C SKI7Q08491 747 aaPredicted RBP4.78□□□□□ -1.64
CAF4YKR036C MUM3Q08750 479 aa4.78□□□□□ -1.64
CAF4YKR036C TRM10Q12400 293 aa4.78□□□□□ -1.64
CAF4YKR036C BI4P03879 638 aa4.78□□□□□ -1.64
CAF4YKR036C CHS2P14180 963 aa4.78□□□□□ -1.64
CAF4YKR036C CYM1P32898 989 aa4.78□□□□□ -1.64
CAF4YKR036C TFA2P36145 328 aa4.78□□□□□ -1.64
CAF4YKR036C MRPL7P36519 292 aa4.78□□□□□ -1.64
CAF4YKR036C YBR056WP38081 501 aa4.78□□□□□ -1.64
CAF4YKR036C FMP23P38231 175 aa4.78□□□□□ -1.64
CAF4YKR036C HXT5P38695 592 aa4.78□□□□□ -1.64
CAF4YKR036C RRP4P38792 359 aaKnown RBP4.78□□□□□ -1.64
CAF4YKR036C EAF5P39995 279 aa4.78□□□□□ -1.64
CAF4YKR036C THO1P40040 218 aaKnown RBP4.78□□□□□ -1.64
CAF4YKR036C MMF1P40185 145 aaKnown RBP4.78□□□□□ -1.64
CAF4YKR036C FIS1P40515 155 aa4.78□□□□□ -1.64
CAF4YKR036C SER2P42941 309 aa4.78□□□□□ -1.64
CAF4YKR036C PHO86P46956 311 aa4.78□□□□□ -1.64
CAF4YKR036C LSM1P47017 172 aaKnown RBP4.78□□□□□ -1.64
CAF4YKR036C LSM8P47093 109 aaKnown RBP4.78□□□□□ -1.64
Retrieved 100 of 5,963 RNA–protein pairs in 19.8 ms