RNA–Protein interactions for RNA: YIR006C

PAN1, Transcript of Part of actin cytoskeleton-regulatory complex Pan1p-Sla1p-End3p, yeast

Gene PAN1, Length 4,443 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PAN1	YIR006C	MIT1	P40002	666 aa		4.61	□□□□□ -1.67
PAN1	YIR006C	INP51	P40559	946 aa	Known RBP	4.61	□□□□□ -1.67
PAN1	YIR006C	GCD10	P41814	478 aa		4.61	□□□□□ -1.67
PAN1	YIR006C	YFL040W	P43562	540 aa		4.61	□□□□□ -1.67
PAN1	YIR006C	PHO86	P46956	311 aa		4.61	□□□□□ -1.67
PAN1	YIR006C	FMP30	Q02883	468 aa		4.61	□□□□□ -1.67
PAN1	YIR006C	SFM1	Q12314	213 aa		4.61	□□□□□ -1.67
PAN1	YIR006C	SKM1	Q12469	655 aa		4.61	□□□□□ -1.67
PAN1	YIR006C	SCH9	P11792	824 aa	Known RBP	4.61	□□□□□ -1.67
PAN1	YIR006C	HEM15	P16622	393 aa		4.61	□□□□□ -1.67
PAN1	YIR006C	ADE2	P21264	571 aa	Known RBP	4.61	□□□□□ -1.67
PAN1	YIR006C	LIP5	P32875	414 aa		4.61	□□□□□ -1.67
PAN1	YIR006C	SNU114	P36048	1008 aa	Known RBP	4.61	□□□□□ -1.67
PAN1	YIR006C	ATM1	P40416	690 aa		4.61	□□□□□ -1.67
PAN1	YIR006C	SNF12	P53628	566 aa		4.61	□□□□□ -1.67
PAN1	YIR006C	YNR068C	P53754	272 aa		4.61	□□□□□ -1.67
PAN1	YIR006C	ARP4	P80428	489 aa		4.61	□□□□□ -1.67
PAN1	YIR006C	RSN1	Q03516	953 aa		4.61	□□□□□ -1.67
PAN1	YIR006C	RIF2	Q06208	395 aa		4.61	□□□□□ -1.67
PAN1	YIR006C	RAP1	P11938	827 aa		4.61	□□□□□ -1.67
PAN1	YIR006C	SAN1	P22470	610 aa		4.61	□□□□□ -1.67
PAN1	YIR006C	YCK2	P23292	546 aa	Known RBP	4.61	□□□□□ -1.67
PAN1	YIR006C	SBA1	P28707	216 aa	Known RBP	4.61	□□□□□ -1.67
PAN1	YIR006C	UBP11	P36026	717 aa		4.61	□□□□□ -1.67
PAN1	YIR006C	MRPL7	P36519	292 aa		4.61	□□□□□ -1.67
PAN1	YIR006C	AMN1	P38285	549 aa	Predicted RBP	4.61	□□□□□ -1.67
PAN1	YIR006C	SRP72	P38688	640 aa	Known RBP	4.61	□□□□□ -1.67
PAN1	YIR006C	MLH1	P38920	769 aa		4.61	□□□□□ -1.67
PAN1	YIR006C	UBP5	P39944	805 aa		4.61	□□□□□ -1.67
PAN1	YIR006C	YJR061W	P40355	935 aa		4.61	□□□□□ -1.67
PAN1	YIR006C	PRP38	Q00723	242 aa	Predicted RBP	4.61	□□□□□ -1.67
PAN1	YIR006C	SWP1	Q02795	286 aa		4.61	□□□□□ -1.67
PAN1	YIR006C	TRM82	Q03774	444 aa		4.61	□□□□□ -1.67
PAN1	YIR006C	YMR315W	Q04869	349 aa	Known RBP	4.61	□□□□□ -1.67
PAN1	YIR006C	ECM7	Q06200	448 aa		4.61	□□□□□ -1.67
PAN1	YIR006C	MCP2	Q06567	569 aa		4.61	□□□□□ -1.67
PAN1	YIR006C	PUT2	P07275	575 aa		4.6	□□□□□ -1.67
PAN1	YIR006C	TUB1	P09733	447 aa	Known RBP	4.6	□□□□□ -1.67
PAN1	YIR006C	CAP2	P13517	287 aa		4.6	□□□□□ -1.67
PAN1	YIR006C	GUK1	P15454	187 aa	Known RBP	4.6	□□□□□ -1.67
PAN1	YIR006C	SEN2	P16658	377 aa		4.6	□□□□□ -1.67
PAN1	YIR006C	ARE1	P25628	610 aa		4.6	□□□□□ -1.67
PAN1	YIR006C	YCR099C	P25657	155 aa		4.6	□□□□□ -1.67
PAN1	YIR006C	ATO2	P32907	282 aa		4.6	□□□□□ -1.67
PAN1	YIR006C	SDH3	P33421	198 aa		4.6	□□□□□ -1.67
PAN1	YIR006C	AGP2	P38090	596 aa		4.6	□□□□□ -1.67
PAN1	YIR006C	COS111	P38308	924 aa		4.6	□□□□□ -1.67
PAN1	YIR006C	ARN1	P38731	627 aa		4.6	□□□□□ -1.67
PAN1	YIR006C	YHR045W	P38775	560 aa		4.6	□□□□□ -1.67
PAN1	YIR006C	SFB3	P38810	929 aa		4.6	□□□□□ -1.67
PAN1	YIR006C	EGD2	P38879	174 aa	Known RBP	4.6	□□□□□ -1.67
PAN1	YIR006C	VPS70	P47161	811 aa		4.6	□□□□□ -1.67
PAN1	YIR006C	SPT20	P50875	604 aa		4.6	□□□□□ -1.67
PAN1	YIR006C	ARE2	P53629	642 aa	Known RBP	4.6	□□□□□ -1.67
PAN1	YIR006C	APM1	Q00776	475 aa	Predicted RBP	4.6	□□□□□ -1.67
PAN1	YIR006C	FAR10	Q06001	478 aa		4.6	□□□□□ -1.67
PAN1	YIR006C	YPR114W	Q06107	315 aa		4.6	□□□□□ -1.67
PAN1	YIR006C	CDD1	Q06549	142 aa		4.6	□□□□□ -1.67
PAN1	YIR006C	TFB5	Q3E7C1	72 aa	Predicted RBP	4.6	□□□□□ -1.67
PAN1	YIR006C	CAP1	P28495	268 aa	Known RBP	4.6	□□□□□ -1.67
PAN1	YIR006C	RPC34	P32910	317 aa		4.6	□□□□□ -1.67
PAN1	YIR006C	TOD6	P34219	525 aa		4.6	□□□□□ -1.67
PAN1	YIR006C	MRPL17	P36528	281 aa		4.6	□□□□□ -1.67
PAN1	YIR006C	MSC7	P38694	644 aa		4.6	□□□□□ -1.67
PAN1	YIR006C	ERP2	P39704	215 aa		4.6	□□□□□ -1.67
PAN1	YIR006C	SOK1	P40317	901 aa		4.6	□□□□□ -1.67
PAN1	YIR006C	YJL055W	P47044	245 aa		4.6	□□□□□ -1.67
PAN1	YIR006C	YTP1	P53584	459 aa		4.6	□□□□□ -1.67
PAN1	YIR006C	YNR021W	P53723	404 aa	Known RBP	4.6	□□□□□ -1.67
PAN1	YIR006C	ECM38	Q05902	660 aa	Predicted RBP	4.6	□□□□□ -1.67
PAN1	YIR006C	FLC1	Q08967	793 aa		4.6	□□□□□ -1.67
PAN1	YIR006C	ARG81	P05085	880 aa		4.6	□□□□□ -1.67
PAN1	YIR006C	RAD7	P06779	565 aa		4.6	□□□□□ -1.67
PAN1	YIR006C	GCY1	P14065	312 aa	Known RBP RIP-Chip data	4.6	□□□□□ -1.67	not detected
PAN1	YIR006C	VMA6	P32366	345 aa	Known RBP	4.6	□□□□□ -1.67
PAN1	YIR006C	ATG14	P38270	344 aa		4.6	□□□□□ -1.67
PAN1	YIR006C	UBX7	P38349	436 aa		4.6	□□□□□ -1.67
PAN1	YIR006C	IPI1	P38803	334 aa	Predicted RBP	4.6	□□□□□ -1.67
PAN1	YIR006C	GYP8	P43570	497 aa		4.6	□□□□□ -1.67
PAN1	YIR006C	RRT5	P43607	289 aa		4.6	□□□□□ -1.67
PAN1	YIR006C	ISM1	P48526	1002 aa		4.6	□□□□□ -1.67
PAN1	YIR006C	PDR8	Q06149	701 aa		4.6	□□□□□ -1.67
PAN1	YIR006C	ASA1	Q06822	443 aa		4.6	□□□□□ -1.67
PAN1	YIR006C	PSR1	Q07800	427 aa		4.6	□□□□□ -1.67
PAN1	YIR006C	SMF3	Q12078	473 aa	Predicted RBP	4.6	□□□□□ -1.67
PAN1	YIR006C	RDI1	Q12434	202 aa		4.6	□□□□□ -1.67
PAN1	YIR006C	CCP1	P00431	361 aa		4.6	□□□□□ -1.67
PAN1	YIR006C	RPP1A	P05318	106 aa	Predicted RBP	4.6	□□□□□ -1.67
PAN1	YIR006C	DAL81	P21657	970 aa		4.6	□□□□□ -1.67
PAN1	YIR006C	AMD2	P22580	549 aa		4.6	□□□□□ -1.67
PAN1	YIR006C	ECM25	P32525	599 aa		4.6	□□□□□ -1.67
PAN1	YIR006C	IMP3	P32899	183 aa	Predicted RBP	4.6	□□□□□ -1.67
PAN1	YIR006C	SHE2	P36068	246 aa	Known RBP RIP-Chip data	4.6	□□□□□ -1.67	not detected
PAN1	YIR006C	FAD1	P38913	306 aa		4.6	□□□□□ -1.67
PAN1	YIR006C	KTR7	P40504	517 aa		4.6	□□□□□ -1.67
PAN1	YIR006C	YJR098C	P47139	656 aa		4.6	□□□□□ -1.67
PAN1	YIR006C	IMD3	P50095	523 aa	Known RBP	4.6	□□□□□ -1.67
PAN1	YIR006C	TDA1	Q03533	586 aa		4.6	□□□□□ -1.67
PAN1	YIR006C	SPO71	Q03868	1245 aa		4.6	□□□□□ -1.67
PAN1	YIR006C	RGC1	Q06108	1083 aa	Known RBP	4.6	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 20.7 ms