RNA–Protein interactions for RNA: YDL111C

RRP42, Transcript of Exosome non-catalytic core component, yeastyeast

Gene RRP42, Length 798 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP42YDL111C NIP100P33420 868 aa3.46□□□□□ -1.86
RRP42YDL111C PIM1P36775 1133 aa3.46□□□□□ -1.86
RRP42YDL111C RPL32P38061 130 aaKnown RBP3.46□□□□□ -1.86
RRP42YDL111C ERV46P39727 415 aa3.46□□□□□ -1.86
RRP42YDL111C SEC28P40509 296 aaKnown RBP3.46□□□□□ -1.86
RRP42YDL111C VMA13P41807 478 aaKnown RBP3.46□□□□□ -1.86
RRP42YDL111C TCB2P48231 1178 aa3.46□□□□□ -1.86
RRP42YDL111C OAZ1Q02803 292 aa3.46□□□□□ -1.86
RRP42YDL111C PDS5Q04264 1277 aa3.46□□□□□ -1.86
RRP42YDL111C DON1Q05610 365 aa3.46□□□□□ -1.86
RRP42YDL111C RBS1Q05672 457 aaKnown RBP3.46□□□□□ -1.86
RRP42YDL111C BSP1Q06604 576 aa3.46□□□□□ -1.86
RRP42YDL111C MCH4Q08268 501 aa3.46□□□□□ -1.86
RRP42YDL111C YOL159CQ08300 171 aa3.46□□□□□ -1.86
RRP42YDL111C YML133CQ03099 1374 aa3.46□□□□□ -1.86
RRP42YDL111C YLL067CQ07888 1374 aa3.46□□□□□ -1.86
RRP42YDL111C YLL066CQ99208 1374 aa3.46□□□□□ -1.86
RRP42YDL111C PUT2P07275 575 aa3.45□□□□□ -1.86
RRP42YDL111C GPA1P08539 472 aa3.45□□□□□ -1.86
RRP42YDL111C RPL31BP0C2H9 113 aaKnown RBP3.45□□□□□ -1.86
RRP42YDL111C NAT1P12945 854 aaKnown RBP3.45□□□□□ -1.86
RRP42YDL111C RPL3P14126 387 aaKnown RBP3.45□□□□□ -1.86
RRP42YDL111C KRR1P25586 316 aaPredicted RBP3.45□□□□□ -1.86
RRP42YDL111C GAC1P28006 793 aa3.45□□□□□ -1.86
RRP42YDL111C RPN2P32565 945 aaKnown RBP3.45□□□□□ -1.86
RRP42YDL111C RML2P32611 393 aa3.45□□□□□ -1.86
RRP42YDL111C HOT13P36078 116 aa3.45□□□□□ -1.86
RRP42YDL111C IMD2P38697 523 aaKnown RBP3.45□□□□□ -1.86
RRP42YDL111C ARN1P38731 627 aa3.45□□□□□ -1.86
RRP42YDL111C LCB2P40970 561 aa3.45□□□□□ -1.86
RRP42YDL111C CIN1P40987 1014 aa3.45□□□□□ -1.86
RRP42YDL111C ALK1P43633 760 aaKnown RBP3.45□□□□□ -1.86
RRP42YDL111C LYS20P48570 428 aaKnown RBP3.45□□□□□ -1.86
RRP42YDL111C IMD3P50095 523 aaKnown RBP3.45□□□□□ -1.86
RRP42YDL111C TOF2Q02208 771 aa3.45□□□□□ -1.86
RRP42YDL111C PEX25Q02969 394 aa3.45□□□□□ -1.86
RRP42YDL111C MSC1Q03104 513 aa3.45□□□□□ -1.86
RRP42YDL111C TAP42Q04372 366 aa3.45□□□□□ -1.86
RRP42YDL111C PDR8Q06149 701 aa3.45□□□□□ -1.86
RRP42YDL111C PIG1Q06216 648 aa3.45□□□□□ -1.86
RRP42YDL111C ECM30Q06673 1274 aa3.45□□□□□ -1.86
RRP42YDL111C FMP45Q07651 309 aa3.45□□□□□ -1.86
RRP42YDL111C PRP2P20095 876 aaPredicted RBP3.44□□□□□ -1.86
RRP42YDL111C YCR006CP25350 157 aa3.44□□□□□ -1.86
RRP42YDL111C IDH2P28241 369 aaKnown RBP3.44□□□□□ -1.86
RRP42YDL111C YME2P32843 850 aa3.44□□□□□ -1.86
RRP42YDL111C PXL1P36166 706 aa3.44□□□□□ -1.86
RRP42YDL111C URB2P47108 1174 aa3.44□□□□□ -1.86
RRP42YDL111C FMS1P50264 508 aa3.44□□□□□ -1.86
RRP42YDL111C ATP22P50273 684 aaPredicted RBP3.44□□□□□ -1.86
RRP42YDL111C YTP1P53584 459 aa3.44□□□□□ -1.86
RRP42YDL111C EAF7P53911 425 aaKnown RBP3.44□□□□□ -1.86
RRP42YDL111C MPS1P54199 764 aa3.44□□□□□ -1.86
RRP42YDL111C RSM23Q01163 450 aa3.44□□□□□ -1.86
RRP42YDL111C HOT1Q03213 719 aa3.44□□□□□ -1.86
RRP42YDL111C GYL1Q04322 720 aa3.44□□□□□ -1.86
RRP42YDL111C SWF1Q04629 336 aa3.44□□□□□ -1.86
RRP42YDL111C RRP45Q05636 305 aaKnown RBP3.44□□□□□ -1.86
RRP42YDL111C ATG26Q06321 1198 aa3.44□□□□□ -1.86
RRP42YDL111C FRE3Q08905 711 aa3.44□□□□□ -1.86
RRP42YDL111C SPE3Q12074 293 aaKnown RBP3.44□□□□□ -1.86
RRP42YDL111C SKS1Q12505 502 aa3.44□□□□□ -1.86
RRP42YDL111C BRR1Q99177 341 aaPredicted RBP3.44□□□□□ -1.86
RRP42YDL111C CBP1P07252 654 aa3.43□□□□□ -1.86
RRP42YDL111C SPS4P09937 338 aa3.43□□□□□ -1.86
RRP42YDL111C ELO2P25358 347 aa3.43□□□□□ -1.86
RRP42YDL111C ERV1P27882 189 aa3.43□□□□□ -1.86
RRP42YDL111C MGM1P32266 881 aa3.43□□□□□ -1.86
RRP42YDL111C LTV1P34078 463 aa3.43□□□□□ -1.86
RRP42YDL111C SWH1P35845 1188 aa3.43□□□□□ -1.86
RRP42YDL111C TUL1P36096 758 aa3.43□□□□□ -1.86
RRP42YDL111C NTC20P38302 140 aaPredicted RBP3.43□□□□□ -1.86
RRP42YDL111C UBA4P38820 440 aa3.43□□□□□ -1.86
RRP42YDL111C ANS1P38832 159 aa3.43□□□□□ -1.86
RRP42YDL111C RPS10BP46784 105 aaKnown RBP3.43□□□□□ -1.86
RRP42YDL111C BPL1P48445 690 aaPredicted RBP3.43□□□□□ -1.86
RRP42YDL111C UBP8P50102 471 aa3.43□□□□□ -1.86
RRP42YDL111C YGR111WP53265 400 aa3.43□□□□□ -1.86
RRP42YDL111C YGR126WP53274 230 aa3.43□□□□□ -1.86
RRP42YDL111C CAF130P53280 1122 aaPredicted RBP3.43□□□□□ -1.86
RRP42YDL111C ASI1P54074 624 aa3.43□□□□□ -1.86
RRP42YDL111C SKO1Q02100 647 aa3.43□□□□□ -1.86
RRP42YDL111C SNU56Q03782 492 aaKnown RBP3.43□□□□□ -1.86
RRP42YDL111C YMR160WQ03823 816 aa3.43□□□□□ -1.86
RRP42YDL111C COQ9Q05779 260 aa3.43□□□□□ -1.86
RRP42YDL111C TPO3Q06451 622 aa3.43□□□□□ -1.86
RRP42YDL111C IRC3Q06683 689 aa3.43□□□□□ -1.86
RRP42YDL111C RPS10AQ08745 105 aaPredicted RBP3.43□□□□□ -1.86
RRP42YDL111C GPM3Q12326 303 aa3.43□□□□□ -1.86
RRP42YDL111C YLR111WQ12528 110 aa3.43□□□□□ -1.86
RRP42YDL111C CTF3Q12748 733 aa3.43□□□□□ -1.86
RRP42YDL111C YER145C-AA0A023PYF4 145 aa3.42□□□□□ -1.86
RRP42YDL111C RAD14P28519 371 aa3.42□□□□□ -1.86
RRP42YDL111C MTR2P34232 184 aaKnown RBP3.42□□□□□ -1.86
RRP42YDL111C RRT2P38332 387 aa3.42□□□□□ -1.86
RRP42YDL111C ARP1P38696 384 aa3.42□□□□□ -1.86
RRP42YDL111C YHR210CP38893 341 aa3.42□□□□□ -1.86
RRP42YDL111C ULP2P40537 1034 aaPredicted RBP3.42□□□□□ -1.86
RRP42YDL111C IRC7P43623 340 aa3.42□□□□□ -1.86
RRP42YDL111C ATG27P46989 271 aa3.42□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 19.7 ms