RNA–Protein interactions for RNA: YCR052W

RSC6, Transcript of Component of the RSC chromatin remodeling complex, yeast

Gene RSC6, Length 1,452 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSC6	YCR052W	KEL2	P50090	882 aa		4.89	□□□□□ -1.63
RSC6	YCR052W	PSP1	P50896	841 aa	Known RBP	4.89	□□□□□ -1.63
RSC6	YCR052W	BOL2	P53082	120 aa		4.89	□□□□□ -1.63
RSC6	YCR052W	TIM11	P81449	96 aa	Predicted RBP	4.89	□□□□□ -1.63
RSC6	YCR052W	TOF2	Q02208	771 aa		4.89	□□□□□ -1.63
RSC6	YCR052W	YML131W	Q03102	365 aa		4.89	□□□□□ -1.63
RSC6	YCR052W	GOT1	Q03554	138 aa		4.89	□□□□□ -1.63
RSC6	YCR052W	RPN9	Q04062	393 aa	Known RBP	4.89	□□□□□ -1.63
RSC6	YCR052W	AIM32	Q04689	311 aa		4.89	□□□□□ -1.63
RSC6	YCR052W	HEL2	Q05580	639 aa	Known RBP	4.89	□□□□□ -1.63
RSC6	YCR052W	YPQ2	Q06328	317 aa		4.89	□□□□□ -1.63
RSC6	YCR052W	NOP12	Q08208	459 aa	Known RBP	4.89	□□□□□ -1.63
RSC6	YCR052W	DNL4	Q08387	944 aa	Predicted RBP	4.89	□□□□□ -1.63
RSC6	YCR052W	GPB1	Q08886	897 aa		4.89	□□□□□ -1.63
RSC6	YCR052W	FLC1	Q08967	793 aa		4.89	□□□□□ -1.63
RSC6	YCR052W	RCN2	Q12044	265 aa		4.89	□□□□□ -1.63
RSC6	YCR052W	NUS1	Q12063	375 aa		4.89	□□□□□ -1.63
RSC6	YCR052W	UPC2	Q12151	913 aa		4.89	□□□□□ -1.63
RSC6	YCR052W	NBP2	Q12163	236 aa		4.89	□□□□□ -1.63
RSC6	YCR052W	JLP1	Q12358	412 aa		4.89	□□□□□ -1.63
RSC6	YCR052W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	4.89	□□□□□ -1.63	not detected
RSC6	YCR052W	PFK27	Q12471	397 aa	Predicted RBP	4.89	□□□□□ -1.63
RSC6	YCR052W	AFI1	Q99222	893 aa		4.89	□□□□□ -1.63
RSC6	YCR052W	MED11	Q99278	115 aa		4.89	□□□□□ -1.63
RSC6	YCR052W	TIM9	O74700	87 aa		4.88	□□□□□ -1.63
RSC6	YCR052W	PRC1	P00729	532 aa		4.88	□□□□□ -1.63
RSC6	YCR052W	CBP2	P03874	630 aa	Predicted RBP	4.88	□□□□□ -1.63
RSC6	YCR052W	HEM2	P05373	342 aa		4.88	□□□□□ -1.63
RSC6	YCR052W	RPB4	P20433	221 aa	Predicted RBP	4.88	□□□□□ -1.63
RSC6	YCR052W	VPS3	P23643	1011 aa		4.88	□□□□□ -1.63
RSC6	YCR052W	PHO3	P24031	467 aa		4.88	□□□□□ -1.63
RSC6	YCR052W	EMC1	P25574	760 aa		4.88	□□□□□ -1.63
RSC6	YCR052W	YCR099C	P25657	155 aa		4.88	□□□□□ -1.63
RSC6	YCR052W	PEX3	P28795	441 aa		4.88	□□□□□ -1.63
RSC6	YCR052W	CYS3	P31373	394 aa	Known RBP	4.88	□□□□□ -1.63
RSC6	YCR052W	SYN8	P31377	255 aa		4.88	□□□□□ -1.63
RSC6	YCR052W	APE2	P32454	952 aa	Known RBP	4.88	□□□□□ -1.63
RSC6	YCR052W	MEI5	P32489	222 aa		4.88	□□□□□ -1.63
RSC6	YCR052W	SKT5	P34226	696 aa		4.88	□□□□□ -1.63
RSC6	YCR052W	CAF4	P36130	643 aa		4.88	□□□□□ -1.63
RSC6	YCR052W	ECM8	P38246	354 aa		4.88	□□□□□ -1.63
RSC6	YCR052W	SHE3	P38272	425 aa	Known RBP	4.88	□□□□□ -1.63
RSC6	YCR052W	UBX7	P38349	436 aa		4.88	□□□□□ -1.63
RSC6	YCR052W	SFB3	P38810	929 aa		4.88	□□□□□ -1.63
RSC6	YCR052W	UTP18	P40362	594 aa	Predicted RBP	4.88	□□□□□ -1.63
RSC6	YCR052W	OPT1	P40897	799 aa		4.88	□□□□□ -1.63
RSC6	YCR052W	EFM3	P47163	339 aa		4.88	□□□□□ -1.63
RSC6	YCR052W	UPF3	P48412	387 aa	Known RBP	4.88	□□□□□ -1.63
RSC6	YCR052W	EFM5	P53200	248 aa	Known RBP	4.88	□□□□□ -1.63
RSC6	YCR052W	CLD1	P53264	445 aa		4.88	□□□□□ -1.63
RSC6	YCR052W	ESF2	P53743	316 aa	Known RBP	4.88	□□□□□ -1.63
RSC6	YCR052W	YNR063W	P53749	607 aa		4.88	□□□□□ -1.63
RSC6	YCR052W	STP1	Q00947	519 aa		4.88	□□□□□ -1.63
RSC6	YCR052W	NUP100	Q02629	959 aa		4.88	□□□□□ -1.63
RSC6	YCR052W	PET117	Q02771	107 aa		4.88	□□□□□ -1.63
RSC6	YCR052W	SWP1	Q02795	286 aa		4.88	□□□□□ -1.63
RSC6	YCR052W	MUK1	Q02866	612 aa		4.88	□□□□□ -1.63
RSC6	YCR052W	SVL3	Q03088	825 aa	Known RBP	4.88	□□□□□ -1.63
RSC6	YCR052W	RSC9	Q03124	581 aa		4.88	□□□□□ -1.63
RSC6	YCR052W	UGO1	Q03327	502 aa		4.88	□□□□□ -1.63
RSC6	YCR052W	YDR444W	Q04093	687 aa		4.88	□□□□□ -1.63
RSC6	YCR052W	SPO20	Q04359	397 aa		4.88	□□□□□ -1.63
RSC6	YCR052W	COA4	Q05809	96 aa		4.88	□□□□□ -1.63
RSC6	YCR052W	GRX8	Q05926	109 aa		4.88	□□□□□ -1.63
RSC6	YCR052W	BLS1	Q06071	122 aa		4.88	□□□□□ -1.63
RSC6	YCR052W	APC5	Q08683	685 aa		4.88	□□□□□ -1.63
RSC6	YCR052W	YOR022C	Q12204	715 aa		4.88	□□□□□ -1.63
RSC6	YCR052W	YOL159C-A	Q3E769	90 aa		4.88	□□□□□ -1.63
RSC6	YCR052W	SLH1	P53327	1967 aa	Known RBP	4.88	□□□□□ -1.63
RSC6	YCR052W	HIS1	P00498	297 aa	Known RBP	4.88	□□□□□ -1.63
RSC6	YCR052W	RAD7	P06779	565 aa		4.88	□□□□□ -1.63
RSC6	YCR052W	CIT2	P08679	460 aa		4.88	□□□□□ -1.63
RSC6	YCR052W	HMG2	P12684	1045 aa		4.88	□□□□□ -1.63
RSC6	YCR052W	MRP13	P12686	339 aa		4.88	□□□□□ -1.63
RSC6	YCR052W	TOP3	P13099	656 aa		4.88	□□□□□ -1.63
RSC6	YCR052W	GUK1	P15454	187 aa	Known RBP	4.88	□□□□□ -1.63
RSC6	YCR052W	CLN1	P20437	546 aa		4.88	□□□□□ -1.63
RSC6	YCR052W	RSA4	P25382	515 aa	Known RBP	4.88	□□□□□ -1.63
RSC6	YCR052W	SGF29	P25554	259 aa		4.88	□□□□□ -1.63
RSC6	YCR052W	PPZ1	P26570	692 aa		4.88	□□□□□ -1.63
RSC6	YCR052W	CMK1	P27466	446 aa	Known RBP	4.88	□□□□□ -1.63
RSC6	YCR052W	FTH1	P38310	465 aa		4.88	□□□□□ -1.63
RSC6	YCR052W	ARP1	P38696	384 aa		4.88	□□□□□ -1.63
RSC6	YCR052W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.88	□□□□□ -1.63	not detected
RSC6	YCR052W	GDH3	P39708	457 aa		4.88	□□□□□ -1.63
RSC6	YCR052W	MTW1	P39731	289 aa		4.88	□□□□□ -1.63
RSC6	YCR052W	ESL1	P40456	1118 aa		4.88	□□□□□ -1.63
RSC6	YCR052W	FKH2	P41813	862 aa		4.88	□□□□□ -1.63
RSC6	YCR052W	GCD10	P41814	478 aa		4.88	□□□□□ -1.63
RSC6	YCR052W	NUP85	P46673	744 aa		4.88	□□□□□ -1.63
RSC6	YCR052W	ATP22	P50273	684 aa	Predicted RBP	4.88	□□□□□ -1.63
RSC6	YCR052W	SLD3	P53135	668 aa		4.88	□□□□□ -1.63
RSC6	YCR052W	TWF1	P53250	332 aa		4.88	□□□□□ -1.63
RSC6	YCR052W	COG5	P53951	403 aa		4.88	□□□□□ -1.63
RSC6	YCR052W	ARP4	P80428	489 aa		4.88	□□□□□ -1.63
RSC6	YCR052W	CDC14	Q00684	551 aa		4.88	□□□□□ -1.63
RSC6	YCR052W	REG1	Q00816	1014 aa		4.88	□□□□□ -1.63
RSC6	YCR052W	YDR109C	Q04585	715 aa		4.88	□□□□□ -1.63
RSC6	YCR052W	APC4	Q04601	652 aa		4.88	□□□□□ -1.63
RSC6	YCR052W	GAL83	Q04739	417 aa		4.88	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 79.6 ms