RNA–Protein interactions for RNA: ENST00000590407.1

PDE4A-207, Transcript of phosphodiesterase 4A, humanhuman

TSL 1 (best)

Gene PDE4A, Length 1,770 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4A-207ENST00000590407 CAPN2P17655 700 aa13.85□□□□□ -0.19
PDE4A-207ENST00000590407 TYW1BQ6NUM6 668 aa13.85□□□□□ -0.19
PDE4A-207ENST00000590407 KRT25Q7Z3Z0 450 aa13.85□□□□□ -0.19
PDE4A-207ENST00000590407 SPZ1Q9BXG8 430 aa13.85□□□□□ -0.19
PDE4A-207ENST00000590407 FAN1Q9Y2M0 1017 aa13.85□□□□□ -0.19
PDE4A-207ENST00000590407 SPATA31A1Q5TZJ5 1347 aa13.84□□□□□ -0.19
PDE4A-207ENST00000590407 PALM3A6NDB9 673 aaPredicted RBP13.84□□□□□ -0.19
PDE4A-207ENST00000590407 LRRIQ3A6PVS8 624 aaPredicted RBP13.84□□□□□ -0.19
PDE4A-207ENST00000590407 PRLRP16471 622 aa13.84□□□□□ -0.19
PDE4A-207ENST00000590407 RPS8P62241 208 aaKnown RBP13.84□□□□□ -0.19
PDE4A-207ENST00000590407 AMPD3Q01432 767 aa13.84□□□□□ -0.19
PDE4A-207ENST00000590407 TFAP4Q01664 338 aa13.84□□□□□ -0.19
PDE4A-207ENST00000590407 DDB1Q16531 1140 aa13.84□□□□□ -0.19
PDE4A-207ENST00000590407 ARHGAP27Q6ZUM4 889 aa13.84□□□□□ -0.19
PDE4A-207ENST00000590407 KIAA1328Q86T90 577 aa13.84□□□□□ -0.19
PDE4A-207ENST00000590407 CERS3Q8IU89 383 aa13.84□□□□□ -0.19
PDE4A-207ENST00000590407 CSGALNACT2Q8N6G5 542 aa13.84□□□□□ -0.19
PDE4A-207ENST00000590407 CELF1Q92879 486 aaKnown RBP13.84□□□□□ -0.19
PDE4A-207ENST00000590407 TRIM9Q9C026 710 aa13.84□□□□□ -0.19
PDE4A-207ENST00000590407 NYXQ9GZU5 481 aa13.84□□□□□ -0.19
PDE4A-207ENST00000590407 ZMYND12Q9H0C1 365 aa13.84□□□□□ -0.19
PDE4A-207ENST00000590407 TMEM51Q9NW97 253 aa13.84□□□□□ -0.19
PDE4A-207ENST00000590407 TRIM10Q9UDY6 481 aa13.84□□□□□ -0.19
PDE4A-207ENST00000590407 MAPK8IP1Q9UQF2 711 aa13.84□□□□□ -0.19
PDE4A-207ENST00000590407 COL24A1Q17RW2 1714 aa13.84□□□□□ -0.19
PDE4A-207ENST00000590407 NRAPQ86VF7 1730 aa13.84□□□□□ -0.19
PDE4A-207ENST00000590407 MYH1P12882 1939 aa13.84□□□□□ -0.19
PDE4A-207ENST00000590407 BAZ2BQ9UIF8 2168 aaKnown RBP13.84□□□□□ -0.19
PDE4A-207ENST00000590407 AHDC1Q5TGY3 1603 aaPredicted RBP13.84□□□□□ -0.19
PDE4A-207ENST00000590407 WTIPA6NIX2 430 aaPredicted RBP13.83□□□□□ -0.19
PDE4A-207ENST00000590407 TFRCP02786 760 aaKnown RBP13.83□□□□□ -0.19
PDE4A-207ENST00000590407 ATP1A1P05023 1023 aaKnown RBP13.83□□□□□ -0.19
PDE4A-207ENST00000590407 OR52Z1P0C646 297 aa13.83□□□□□ -0.19
PDE4A-207ENST00000590407 VAV2P52735 878 aa13.83□□□□□ -0.19
PDE4A-207ENST00000590407 GYS2P54840 703 aa13.83□□□□□ -0.19
PDE4A-207ENST00000590407 PPP4CP60510 307 aa13.83□□□□□ -0.19
PDE4A-207ENST00000590407 EVX2Q03828 476 aa13.83□□□□□ -0.19
PDE4A-207ENST00000590407 TBC1D8BQ0IIM8 1120 aa13.83□□□□□ -0.19
PDE4A-207ENST00000590407 SLC35G1Q2M3R5 365 aa13.83□□□□□ -0.19
PDE4A-207ENST00000590407 CABP7Q86V35 215 aa13.83□□□□□ -0.19
PDE4A-207ENST00000590407 GPKOWQ92917 476 aaPredicted RBP eCLIP13.83□□□□□ -0.19
PDE4A-207ENST00000590407 MMS19Q96T76 1030 aa13.83□□□□□ -0.19
PDE4A-207ENST00000590407 NHEJ1Q9H9Q4 299 aaPredicted RBP13.83□□□□□ -0.19
PDE4A-207ENST00000590407 SUGCTQ9HAC7 445 aa13.83□□□□□ -0.19
PDE4A-207ENST00000590407 ZC3H4Q9UPT8 1303 aaKnown RBP13.83□□□□□ -0.2
PDE4A-207ENST00000590407 NUTM2BA6NNL0 878 aaPredicted RBP13.83□□□□□ -0.2
PDE4A-207ENST00000590407 NUTM2EB1AL46 878 aaPredicted RBP13.83□□□□□ -0.2
PDE4A-207ENST00000590407 B4DLN1 442 aa13.83□□□□□ -0.2
PDE4A-207ENST00000590407 N4BP1O75113 896 aaKnown RBP13.83□□□□□ -0.2
PDE4A-207ENST00000590407 LCA5LO95447 670 aa13.83□□□□□ -0.2
PDE4A-207ENST00000590407 TRIM21P19474 475 aaKnown RBP13.83□□□□□ -0.2
PDE4A-207ENST00000590407 PRDX5P30044 214 aa13.83□□□□□ -0.2
PDE4A-207ENST00000590407 SF3B2Q13435 895 aaKnown RBP13.83□□□□□ -0.2
PDE4A-207ENST00000590407 INF2Q27J81 1249 aa13.83□□□□□ -0.2
PDE4A-207ENST00000590407 MIIPQ5JXC2 388 aa13.83□□□□□ -0.2
PDE4A-207ENST00000590407 CNNM4Q6P4Q7 775 aa13.83□□□□□ -0.2
PDE4A-207ENST00000590407 STAG2Q8N3U4 1231 aa13.83□□□□□ -0.2
PDE4A-207ENST00000590407 MMGT1Q8N4V1 131 aa13.83□□□□□ -0.2
PDE4A-207ENST00000590407 COG1Q8WTW3 980 aa13.83□□□□□ -0.2
PDE4A-207ENST00000590407 CNOT6LQ96LI5 555 aaKnown RBP13.83□□□□□ -0.2
PDE4A-207ENST00000590407 MCM9Q9NXL9 1143 aa13.83□□□□□ -0.2
PDE4A-207ENST00000590407 FEZ2Q9UHY8 353 aaPredicted RBP13.83□□□□□ -0.2
PDE4A-207ENST00000590407 HPCAL4Q9UM19 191 aa13.83□□□□□ -0.2
PDE4A-207ENST00000590407 CNTNAP4Q9C0A0 1308 aa13.82□□□□□ -0.2
PDE4A-207ENST00000590407 ESYT2A0FGR8 921 aa13.82□□□□□ -0.2
PDE4A-207ENST00000590407 PP2D1A8MPX8 630 aa13.82□□□□□ -0.2
PDE4A-207ENST00000590407 CYTH3O43739 400 aa13.82□□□□□ -0.2
PDE4A-207ENST00000590407 PRPF6O94906 941 aaKnown RBP13.82□□□□□ -0.2
PDE4A-207ENST00000590407 PLCG1P19174 1290 aa13.82□□□□□ -0.2
PDE4A-207ENST00000590407 CENPPQ6IPU0 288 aa13.82□□□□□ -0.2
PDE4A-207ENST00000590407 TRIM58Q8NG06 486 aa13.82□□□□□ -0.2
PDE4A-207ENST00000590407 RASSF8Q8NHQ8 419 aa13.82□□□□□ -0.2
PDE4A-207ENST00000590407 RASGRP4Q8TDF6 673 aa13.82□□□□□ -0.2
PDE4A-207ENST00000590407 LRRC15Q8TF66 581 aa13.82□□□□□ -0.2
PDE4A-207ENST00000590407 CCDC102AQ96A19 550 aa13.82□□□□□ -0.2
PDE4A-207ENST00000590407 EDEM3Q9BZQ6 932 aa13.82□□□□□ -0.2
PDE4A-207ENST00000590407 PLAGL2Q9UPG8 496 aa13.82□□□□□ -0.2
PDE4A-207ENST00000590407 TAF1P21675 1872 aa13.82□□□□□ -0.2
PDE4A-207ENST00000590407 SYF2O95926 243 aaKnown RBP13.81□□□□□ -0.2
PDE4A-207ENST00000590407 USP17L8P0C7I0 530 aa13.81□□□□□ -0.2
PDE4A-207ENST00000590407 KLRK1P26718 216 aa13.81□□□□□ -0.2
PDE4A-207ENST00000590407 GSTO1P78417 241 aa13.81□□□□□ -0.2
PDE4A-207ENST00000590407 KIF5AQ12840 1032 aa13.81□□□□□ -0.2
PDE4A-207ENST00000590407 FKBP15Q5T1M5 1219 aa13.81□□□□□ -0.2
PDE4A-207ENST00000590407 ANKRD40Q6AI12 368 aa13.81□□□□□ -0.2
PDE4A-207ENST00000590407 CCNI2Q6ZMN8 369 aaPredicted RBP13.81□□□□□ -0.2
PDE4A-207ENST00000590407 DZIP1Q86YF9 867 aaKnown RBP13.81□□□□□ -0.2
PDE4A-207ENST00000590407 AMOTL1Q8IY63 956 aa13.81□□□□□ -0.2
PDE4A-207ENST00000590407 MARCH10Q8NA82 808 aaPredicted RBP13.81□□□□□ -0.2
PDE4A-207ENST00000590407 WDR66Q8TBY9 1149 aa13.81□□□□□ -0.2
PDE4A-207ENST00000590407 LACRTQ9GZZ8 138 aa13.81□□□□□ -0.2
PDE4A-207ENST00000590407 AGPAT5Q9NUQ2 364 aa13.81□□□□□ -0.2
PDE4A-207ENST00000590407 HDAC6Q9UBN7 1215 aa13.81□□□□□ -0.2
PDE4A-207ENST00000590407 STK17AQ9UEE5 414 aa13.81□□□□□ -0.2
PDE4A-207ENST00000590407 JRKLQ9Y4A0 524 aa13.81□□□□□ -0.2
PDE4A-207ENST00000590407 PVALEFA0A1B0GWK0 134 aa13.81□□□□□ -0.2
PDE4A-207ENST00000590407 RCCD1A6NED2 376 aa13.81□□□□□ -0.2
PDE4A-207ENST00000590407 hCG_1984214I3L0E3 225 aa13.81□□□□□ -0.2
PDE4A-207ENST00000590407 USO1O60763 962 aaKnown RBP13.81□□□□□ -0.2
PDE4A-207ENST00000590407 CLSTN1O94985 981 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms