RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 JAMLQ86YT9 394 aa5.6□□□□□ -1.51
SKP1-212ENST00000523966 PPIL6Q8IXY8 311 aa5.6□□□□□ -1.51
SKP1-212ENST00000523966 FLCNQ8NFG4 579 aa5.6□□□□□ -1.51
SKP1-212ENST00000523966 BCL7CQ8WUZ0 217 aaPredicted RBP5.6□□□□□ -1.51
SKP1-212ENST00000523966 DCAF4Q8WV16 495 aa5.6□□□□□ -1.51
SKP1-212ENST00000523966 KISS1RQ969F8 398 aaPredicted RBP5.6□□□□□ -1.51
SKP1-212ENST00000523966 OSBP2Q969R2 916 aa5.6□□□□□ -1.51
SKP1-212ENST00000523966 MRPL4Q9BYD3 311 aaKnown RBP5.6□□□□□ -1.51
SKP1-212ENST00000523966 CARS2Q9HA77 564 aaKnown RBP5.6□□□□□ -1.51
SKP1-212ENST00000523966 GPRC5CQ9NQ84 441 aa5.6□□□□□ -1.51
SKP1-212ENST00000523966 AP5S1Q9NUS5 200 aa5.6□□□□□ -1.51
SKP1-212ENST00000523966 NDOR1Q9UHB4 597 aa5.6□□□□□ -1.51
SKP1-212ENST00000523966 PLAAQ9Y263 795 aa5.6□□□□□ -1.51
SKP1-212ENST00000523966 PRKAB1Q9Y478 270 aa5.6□□□□□ -1.51
SKP1-212ENST00000523966 NPHP3-ACAD11A0A0J9YXS1 232 aa5.59□□□□□ -1.51
SKP1-212ENST00000523966 A0A1W2PQ27 194 aa5.59□□□□□ -1.51
SKP1-212ENST00000523966 A0A1W2PQ64 194 aa5.59□□□□□ -1.51
SKP1-212ENST00000523966 A0A1W2PQC6 194 aa5.59□□□□□ -1.51
SKP1-212ENST00000523966 A0A1W2PQD8 194 aa5.59□□□□□ -1.51
SKP1-212ENST00000523966 AQP7O14520 342 aa5.59□□□□□ -1.51
SKP1-212ENST00000523966 ESR1P03372 595 aa5.59□□□□□ -1.51
SKP1-212ENST00000523966 THBDP07204 575 aa5.59□□□□□ -1.51
SKP1-212ENST00000523966 MSMPQ1L6U9 139 aa5.59□□□□□ -1.51
SKP1-212ENST00000523966 FNDC3BQ53EP0 1204 aaKnown RBP5.59□□□□□ -1.51
SKP1-212ENST00000523966 HLA-DQA1Q5Y7H0 255 aa5.59□□□□□ -1.51
SKP1-212ENST00000523966 E4F1Q66K89 784 aaPredicted RBP5.59□□□□□ -1.51
SKP1-212ENST00000523966 KIAA0907Q7Z7F0 614 aaPredicted RBP5.59□□□□□ -1.51
SKP1-212ENST00000523966 DIO2Q92813 273 aa5.59□□□□□ -1.51
SKP1-212ENST00000523966 COPS5Q92905 334 aa5.59□□□□□ -1.51
SKP1-212ENST00000523966 PTPRN2Q92932 1015 aa5.59□□□□□ -1.51
SKP1-212ENST00000523966 PTCHD1Q96NR3 888 aa5.59□□□□□ -1.51
SKP1-212ENST00000523966 NCOA5Q9HCD5 579 aaKnown RBP5.59□□□□□ -1.51
SKP1-212ENST00000523966 CLEC1BQ9P126 229 aa5.59□□□□□ -1.51
SKP1-212ENST00000523966 SFMBT1Q9UHJ3 866 aa5.59□□□□□ -1.51
SKP1-212ENST00000523966 CD2APQ9Y5K6 639 aa5.59□□□□□ -1.51
SKP1-212ENST00000523966 MYO1BO43795 1136 aa5.58□□□□□ -1.52
SKP1-212ENST00000523966 RAPGEF3O95398 923 aa5.58□□□□□ -1.52
SKP1-212ENST00000523966 PLS3P13797 630 aa5.58□□□□□ -1.52
SKP1-212ENST00000523966 IBSPP21815 317 aaPredicted RBP5.58□□□□□ -1.52
SKP1-212ENST00000523966 TEKQ02763 1124 aa5.58□□□□□ -1.52
SKP1-212ENST00000523966 KCNAB2Q13303 367 aa5.58□□□□□ -1.52
SKP1-212ENST00000523966 LAPTM5Q13571 262 aa5.58□□□□□ -1.52
SKP1-212ENST00000523966 C21orf62-AS1Q17RA5 79 aa5.58□□□□□ -1.52
SKP1-212ENST00000523966 PRSS53Q2L4Q9 553 aa5.58□□□□□ -1.52
SKP1-212ENST00000523966 RTP2Q5QGT7 225 aa5.58□□□□□ -1.52
SKP1-212ENST00000523966 SLC35F1Q5T1Q4 408 aa5.58□□□□□ -1.52
SKP1-212ENST00000523966 ACBD5Q5T8D3 534 aaPredicted RBP5.58□□□□□ -1.52
SKP1-212ENST00000523966 MAMDC2Q7Z304 686 aaPredicted RBP5.58□□□□□ -1.52
SKP1-212ENST00000523966 PI4K2BQ8TCG2 481 aa5.58□□□□□ -1.52
SKP1-212ENST00000523966 FCRL2Q96LA5 508 aaPredicted RBP5.58□□□□□ -1.52
SKP1-212ENST00000523966 MAGEB10Q96LZ2 347 aaPredicted RBP5.58□□□□□ -1.52
SKP1-212ENST00000523966 MCMBPQ9BTE3 642 aa5.58□□□□□ -1.52
SKP1-212ENST00000523966 PCMTD2Q9NV79 361 aa5.58□□□□□ -1.52
SKP1-212ENST00000523966 SLAMF8Q9P0V8 285 aa5.58□□□□□ -1.52
SKP1-212ENST00000523966 TNFRSF10DQ9UBN6 386 aa5.58□□□□□ -1.52
SKP1-212ENST00000523966 BLACEA4D250 179 aa5.57□□□□□ -1.52
SKP1-212ENST00000523966 FGF10O15520 208 aaPredicted RBP5.57□□□□□ -1.52
SKP1-212ENST00000523966 DNAJC6O75061 913 aa5.57□□□□□ -1.52
SKP1-212ENST00000523966 RFPL3O75679 317 aa5.57□□□□□ -1.52
SKP1-212ENST00000523966 CAPNS1P04632 268 aa5.57□□□□□ -1.52
SKP1-212ENST00000523966 CD8BP10966 210 aa5.57□□□□□ -1.52
SKP1-212ENST00000523966 LTBRP36941 435 aa5.57□□□□□ -1.52
SKP1-212ENST00000523966 PABPC4Q13310 644 aaKnown RBP eCLIP5.57□□□□□ -1.528e-43■■□□□ 12.4
SKP1-212ENST00000523966 SLC14A2Q15849 920 aa5.57□□□□□ -1.52
SKP1-212ENST00000523966 TKFCQ3LXA3 575 aa5.57□□□□□ -1.52
SKP1-212ENST00000523966 RSPO2Q6UXX9 243 aaPredicted RBP5.57□□□□□ -1.52
SKP1-212ENST00000523966 SPPL2CQ8IUH8 684 aa5.57□□□□□ -1.52
SKP1-212ENST00000523966 TP53INP2Q8IXH6 220 aa5.57□□□□□ -1.52
SKP1-212ENST00000523966 NIM1KQ8IY84 436 aa5.57□□□□□ -1.52
SKP1-212ENST00000523966 IFNL3Q8IZI9 196 aa5.57□□□□□ -1.52
SKP1-212ENST00000523966 AGBL5Q8NDL9 886 aa5.57□□□□□ -1.52
SKP1-212ENST00000523966 ZCRB1Q8TBF4 217 aaKnown RBP5.57□□□□□ -1.52
SKP1-212ENST00000523966 FRS2Q8WU20 508 aa5.57□□□□□ -1.52
SKP1-212ENST00000523966 NINJ1Q92982 152 aa5.57□□□□□ -1.52
SKP1-212ENST00000523966 CHAMP1Q96JM3 812 aa5.57□□□□□ -1.52
SKP1-212ENST00000523966 ALPK1Q96QP1 1244 aa5.57□□□□□ -1.52
SKP1-212ENST00000523966 SPC25Q9HBM1 224 aa5.57□□□□□ -1.52
SKP1-212ENST00000523966 NPHS1O60500 1241 aa5.56□□□□□ -1.52
SKP1-212ENST00000523966 WNT11O96014 354 aa5.56□□□□□ -1.52
SKP1-212ENST00000523966 PRNPP04156 253 aa5.56□□□□□ -1.52
SKP1-212ENST00000523966 FLT3P36888 993 aa5.56□□□□□ -1.52
SKP1-212ENST00000523966 CD96P40200 585 aa5.56□□□□□ -1.52
SKP1-212ENST00000523966 CBX2Q14781 532 aaPredicted RBP5.56□□□□□ -1.52
SKP1-212ENST00000523966 ZPBP2Q6X784 338 aa5.56□□□□□ -1.52
SKP1-212ENST00000523966 ZNF662Q6ZS27 426 aa5.56□□□□□ -1.52
SKP1-212ENST00000523966 FILIP1Q7Z7B0 1213 aa5.56□□□□□ -1.52
SKP1-212ENST00000523966 MTDHQ86UE4 582 aaKnown RBP5.56□□□□□ -1.52
SKP1-212ENST00000523966 DTX1Q86Y01 620 aa5.56□□□□□ -1.52
SKP1-212ENST00000523966 DHX37Q8IY37 1157 aaKnown RBP5.56□□□□□ -1.52
SKP1-212ENST00000523966 OXR1Q8N573 874 aa5.56□□□□□ -1.52
SKP1-212ENST00000523966 NPLOC4Q8TAT6 608 aa5.56□□□□□ -1.52
SKP1-212ENST00000523966 MMP19Q99542 508 aa5.56□□□□□ -1.52
SKP1-212ENST00000523966 ZFYVE21Q9BQ24 234 aa5.56□□□□□ -1.52
SKP1-212ENST00000523966 ALG1Q9BT22 464 aa5.56□□□□□ -1.52
SKP1-212ENST00000523966 PHF20Q9BVI0 1012 aa5.56□□□□□ -1.52
SKP1-212ENST00000523966 GPR27Q9NS67 375 aa5.56□□□□□ -1.52
SKP1-212ENST00000523966 CCDC39Q9UFE4 941 aa5.56□□□□□ -1.52
SKP1-212ENST00000523966 A0A1W2PQJ5 194 aa5.55□□□□□ -1.52
SKP1-212ENST00000523966 TMEM82A0PJX8 343 aa5.55□□□□□ -1.52
SKP1-212ENST00000523966 CD97P48960 835 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms