RNA–Protein interactions for RNA: ENST00000437100.5

CPNE1-215, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-215ENST00000437100 ZSCAN31Q96LW9 406 aaPredicted RBP17.1■□□□□ 0.33
CPNE1-215ENST00000437100 RNF26Q9BY78 433 aaPredicted RBP17.1■□□□□ 0.33
CPNE1-215ENST00000437100 MAF1Q9H063 256 aa17.1■□□□□ 0.33
CPNE1-215ENST00000437100 SH2B1Q9NRF2 756 aaPredicted RBP17.1■□□□□ 0.33
CPNE1-215ENST00000437100 BAZ2BQ9UIF8 2168 aaKnown RBP17.1■□□□□ 0.33
CPNE1-215ENST00000437100 MGAMO43451 1857 aa17.1■□□□□ 0.33
CPNE1-215ENST00000437100 DNAJC25-GNG10A0A024R161 153 aa17.09■□□□□ 0.33
CPNE1-215ENST00000437100 hCG_1642624A0A1W2PR95 340 aa17.09■□□□□ 0.33
CPNE1-215ENST00000437100 NFIBO00712 420 aa17.09■□□□□ 0.33
CPNE1-215ENST00000437100 PRPF3O43395 683 aaKnown RBP17.09■□□□□ 0.33
CPNE1-215ENST00000437100 ECM2O94769 699 aaPredicted RBP17.09■□□□□ 0.33
CPNE1-215ENST00000437100 HOXC6P09630 235 aa17.09■□□□□ 0.33
CPNE1-215ENST00000437100 MCM2P49736 904 aa17.09■□□□□ 0.33
CPNE1-215ENST00000437100 PRMT2P55345 433 aa17.09■□□□□ 0.33
CPNE1-215ENST00000437100 IRF5Q13568 498 aa17.09■□□□□ 0.33
CPNE1-215ENST00000437100 PKN1Q16512 942 aa17.09■□□□□ 0.33
CPNE1-215ENST00000437100 USH1GQ495M9 461 aa17.09■□□□□ 0.33
CPNE1-215ENST00000437100 CCAR1Q8IX12 1150 aaKnown RBP17.09■□□□□ 0.33
CPNE1-215ENST00000437100 PHKBQ93100 1093 aa17.09■□□□□ 0.33
CPNE1-215ENST00000437100 A1CFQ9NQ94 594 aaKnown RBP17.09■□□□□ 0.33
CPNE1-215ENST00000437100 HOMER2Q9NSB8 354 aa17.09■□□□□ 0.33
CPNE1-215ENST00000437100 RBM27Q9P2N5 1060 aaKnown RBP17.09■□□□□ 0.33
CPNE1-215ENST00000437100 SEC63Q9UGP8 760 aaKnown RBP17.09■□□□□ 0.33
CPNE1-215ENST00000437100 GABRQQ9UN88 632 aa17.09■□□□□ 0.33
CPNE1-215ENST00000437100 TRIM17Q9Y577 477 aa17.09■□□□□ 0.33
CPNE1-215ENST00000437100 V9GY48 417 aaPredicted RBP17.09■□□□□ 0.33
CPNE1-215ENST00000437100 PLXNB2O15031 1838 aa17.09■□□□□ 0.33
CPNE1-215ENST00000437100 STK36Q9NRP7 1315 aa17.08■□□□□ 0.32
CPNE1-215ENST00000437100 IGHA2P01877 340 aa17.08■□□□□ 0.32
CPNE1-215ENST00000437100 FCER1AP12319 257 aa17.08■□□□□ 0.32
CPNE1-215ENST00000437100 HOXD10P28358 340 aa17.08■□□□□ 0.32
CPNE1-215ENST00000437100 ADORA2AP29274 412 aa17.08■□□□□ 0.32
CPNE1-215ENST00000437100 FLT3LGP49771 235 aa17.08■□□□□ 0.32
CPNE1-215ENST00000437100 TRAF1Q13077 416 aa17.08■□□□□ 0.32
CPNE1-215ENST00000437100 MAP2K5Q13163 448 aa17.08■□□□□ 0.32
CPNE1-215ENST00000437100 PFKFB3Q16875 520 aaPredicted RBP17.08■□□□□ 0.32
CPNE1-215ENST00000437100 RGS22Q8NE09 1264 aa17.08■□□□□ 0.32
CPNE1-215ENST00000437100 NSUN7Q8NE18 718 aaKnown RBP17.08■□□□□ 0.32
CPNE1-215ENST00000437100 PIBF1Q8WXW3 757 aa17.08■□□□□ 0.32
CPNE1-215ENST00000437100 MMP19Q99542 508 aa17.08■□□□□ 0.32
CPNE1-215ENST00000437100 NUDT12Q9BQG2 462 aa17.08■□□□□ 0.32
CPNE1-215ENST00000437100 MRPL11Q9Y3B7 192 aaKnown RBP17.08■□□□□ 0.32
CPNE1-215ENST00000437100 PCDHA1Q9Y5I3 950 aa17.08■□□□□ 0.32
CPNE1-215ENST00000437100 SMCHD1A6NHR9 2005 aa17.08■□□□□ 0.32
CPNE1-215ENST00000437100 hCG_1984214I3L0E3 225 aa17.07■□□□□ 0.32
CPNE1-215ENST00000437100 CPLX1O14810 134 aa17.07■□□□□ 0.32
CPNE1-215ENST00000437100 COBLO75128 1261 aa17.07■□□□□ 0.32
CPNE1-215ENST00000437100 XRCC5P13010 732 aaKnown RBP17.07■□□□□ 0.32
CPNE1-215ENST00000437100 KCTD2Q14681 263 aa17.07■□□□□ 0.32
CPNE1-215ENST00000437100 WDR78Q5VTH9 848 aa17.07■□□□□ 0.32
CPNE1-215ENST00000437100 WWC2Q6AWC2 1192 aa17.07■□□□□ 0.32
CPNE1-215ENST00000437100 TYW1BQ6NUM6 668 aa17.07■□□□□ 0.32
CPNE1-215ENST00000437100 CPLX2Q6PUV4 134 aaKnown RBP17.07■□□□□ 0.32
CPNE1-215ENST00000437100 ZNF713Q8N859 430 aaPredicted RBP17.07■□□□□ 0.32
CPNE1-215ENST00000437100 TMX3Q96JJ7 454 aa17.07■□□□□ 0.32
CPNE1-215ENST00000437100 CYP39A1Q9NYL5 469 aa17.07■□□□□ 0.32
CPNE1-215ENST00000437100 PTPN22Q9Y2R2 807 aa17.07■□□□□ 0.32
CPNE1-215ENST00000437100 IVNS1ABPQ9Y6Y0 642 aa17.07■□□□□ 0.32
CPNE1-215ENST00000437100 DOCK3Q8IZD9 2030 aa17.06■□□□□ 0.32
CPNE1-215ENST00000437100 PFASO15067 1338 aa17.06■□□□□ 0.32
CPNE1-215ENST00000437100 CDKL5O76039 1030 aa17.06■□□□□ 0.32
CPNE1-215ENST00000437100 SCG2P13521 617 aa17.06■□□□□ 0.32
CPNE1-215ENST00000437100 SLC4A3P48751 1232 aa17.06■□□□□ 0.32
CPNE1-215ENST00000437100 PKN2Q16513 984 aaKnown RBP17.06■□□□□ 0.32
CPNE1-215ENST00000437100 ZNF792Q3KQV3 632 aa17.06■□□□□ 0.32
CPNE1-215ENST00000437100 FAM133AQ8N9E0 248 aa17.06■□□□□ 0.32
CPNE1-215ENST00000437100 SHISA4Q96DD7 197 aa17.06■□□□□ 0.32
CPNE1-215ENST00000437100 FGD4Q96M96 766 aa17.06■□□□□ 0.32
CPNE1-215ENST00000437100 APBA2Q99767 749 aa17.06■□□□□ 0.32
CPNE1-215ENST00000437100 SLC26A6Q9BXS9 759 aa17.06■□□□□ 0.32
CPNE1-215ENST00000437100 BARHL2Q9NY43 387 aa17.06■□□□□ 0.32
CPNE1-215ENST00000437100 HTTP42858 3142 aa17.06■□□□□ 0.32
CPNE1-215ENST00000437100 STXBP3O00186 592 aa17.05■□□□□ 0.32
CPNE1-215ENST00000437100 PPFIA3O75145 1194 aa17.05■□□□□ 0.32
CPNE1-215ENST00000437100 RGS2P41220 211 aa17.05■□□□□ 0.32
CPNE1-215ENST00000437100 HSD17B4P51659 736 aa17.05■□□□□ 0.32
CPNE1-215ENST00000437100 SSRP1Q08945 709 aaKnown RBP17.05■□□□□ 0.32
CPNE1-215ENST00000437100 PPP1R18Q6NYC8 613 aa17.05■□□□□ 0.32
CPNE1-215ENST00000437100 SLC30A10Q6XR72 485 aa17.05■□□□□ 0.32
CPNE1-215ENST00000437100 HEATR3Q7Z4Q2 680 aa17.05■□□□□ 0.32
CPNE1-215ENST00000437100 MCF2L2Q86YR7 1114 aa17.05■□□□□ 0.32
CPNE1-215ENST00000437100 CCDC83Q8IWF9 413 aa17.05■□□□□ 0.32
CPNE1-215ENST00000437100 ANKRD35Q8N283 1001 aa17.05■□□□□ 0.32
CPNE1-215ENST00000437100 SAMD3Q8N6K7 520 aa17.05■□□□□ 0.32
CPNE1-215ENST00000437100 SMARCC2Q8TAQ2 1214 aa17.05■□□□□ 0.32
CPNE1-215ENST00000437100 NPLOC4Q8TAT6 608 aa17.05■□□□□ 0.32
CPNE1-215ENST00000437100 GPKOWQ92917 476 aaPredicted RBP eCLIP17.05■□□□□ 0.32
CPNE1-215ENST00000437100 SNX21Q969T3 373 aa17.05■□□□□ 0.32
CPNE1-215ENST00000437100 LLPHQ9BRT6 129 aaKnown RBP17.05■□□□□ 0.32
CPNE1-215ENST00000437100 CWC22Q9HCG8 908 aaKnown RBP17.05■□□□□ 0.32
CPNE1-215ENST00000437100 DIS3Q9Y2L1 958 aaKnown RBP17.05■□□□□ 0.32
CPNE1-215ENST00000437100 PTCH2Q9Y6C5 1203 aa17.05■□□□□ 0.32
CPNE1-215ENST00000437100 ASTN1O14525 1302 aa17.04■□□□□ 0.32
CPNE1-215ENST00000437100 PTPDC1A2A3K4 754 aa17.04■□□□□ 0.32
CPNE1-215ENST00000437100 DEXIO95424 95 aa17.04■□□□□ 0.32
CPNE1-215ENST00000437100 PGK2P07205 417 aa17.04■□□□□ 0.32
CPNE1-215ENST00000437100 FDPSP14324 419 aaKnown RBP17.04■□□□□ 0.32
CPNE1-215ENST00000437100 RPS6P62753 249 aaKnown RBP17.04■□□□□ 0.32
CPNE1-215ENST00000437100 BAATQ14032 418 aaPredicted RBP17.04■□□□□ 0.32
CPNE1-215ENST00000437100 FBXO46Q6PJ61 603 aaPredicted RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms