RNA–Protein interactions for RNA: YOL133W

HRT1, Transcript of RING-H2 domain core subunit of multiple ubiquitin ligase complexes, yeast

Gene HRT1, Length 366 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HRT1	YOL133W	YCR043C	P25361	127 aa		4.82	□□□□□ -1.64
HRT1	YOL133W	YIR016W	P40572	265 aa		4.82	□□□□□ -1.64
HRT1	YOL133W	DRN1	P53255	507 aa	Known RBP	4.82	□□□□□ -1.64
HRT1	YOL133W	CTL1	Q03220	320 aa	Known RBP	4.82	□□□□□ -1.64
HRT1	YOL133W	YMR034C	Q05131	434 aa	Predicted RBP	4.82	□□□□□ -1.64
HRT1	YOL133W	YDL218W	Q07629	317 aa		4.82	□□□□□ -1.64
HRT1	YOL133W	BUD7	Q08754	746 aa		4.82	□□□□□ -1.64
HRT1	YOL133W	YJR112W-A	Q3E743	109 aa		4.82	□□□□□ -1.64
HRT1	YOL133W	SNF3	P10870	884 aa		4.81	□□□□□ -1.64
HRT1	YOL133W	RPS2	P25443	254 aa	Known RBP	4.81	□□□□□ -1.64
HRT1	YOL133W	CMK1	P27466	446 aa	Known RBP	4.81	□□□□□ -1.64
HRT1	YOL133W	YBR144C	P34215	104 aa		4.81	□□□□□ -1.64
HRT1	YOL133W	YPK3	P38070	525 aa		4.81	□□□□□ -1.64
HRT1	YOL133W	SCO2	P38072	301 aa		4.81	□□□□□ -1.64
HRT1	YOL133W	ARC40	P38328	384 aa	Known RBP	4.81	□□□□□ -1.64
HRT1	YOL133W	MET28	P40573	187 aa		4.81	□□□□□ -1.64
HRT1	YOL133W	RTS2	P40962	232 aa		4.81	□□□□□ -1.64
HRT1	YOL133W	FAR3	P46671	204 aa		4.81	□□□□□ -1.64
HRT1	YOL133W	SOL4	P53315	255 aa		4.81	□□□□□ -1.64
HRT1	YOL133W	BET4	Q00618	327 aa		4.81	□□□□□ -1.64
HRT1	YOL133W	MFB1	Q04922	465 aa		4.81	□□□□□ -1.64
HRT1	YOL133W	SRL1	Q08673	210 aa		4.81	□□□□□ -1.64
HRT1	YOL133W	DSE3	Q08729	430 aa		4.81	□□□□□ -1.64
HRT1	YOL133W	RPB8	P20436	146 aa		4.8	□□□□□ -1.64
HRT1	YOL133W	SPE2	P21182	396 aa		4.8	□□□□□ -1.64
HRT1	YOL133W	PDR3	P33200	976 aa		4.8	□□□□□ -1.64
HRT1	YOL133W	SPC34	P36131	295 aa		4.8	□□□□□ -1.64
HRT1	YOL133W	DBP8	P38719	431 aa		4.8	□□□□□ -1.64
HRT1	YOL133W	YER130C	P39959	443 aa		4.8	□□□□□ -1.64
HRT1	YOL133W	YEL057C	P39983	233 aa		4.8	□□□□□ -1.64
HRT1	YOL133W	TES1	P41903	349 aa	Known RBP	4.8	□□□□□ -1.64
HRT1	YOL133W	RMD8	P43620	662 aa		4.8	□□□□□ -1.64
HRT1	YOL133W	YNL181W	P53878	407 aa		4.8	□□□□□ -1.64
HRT1	YOL133W	MPS1	P54199	764 aa		4.8	□□□□□ -1.64
HRT1	YOL133W	RSM23	Q01163	450 aa		4.8	□□□□□ -1.64
HRT1	YOL133W	BUD22	Q04347	519 aa	Known RBP	4.8	□□□□□ -1.64
HRT1	YOL133W	YMR254C	Q04838	102 aa		4.8	□□□□□ -1.64
HRT1	YOL133W	RCN2	Q12044	265 aa		4.8	□□□□□ -1.64
HRT1	YOL133W	BSC1	Q12140	328 aa		4.8	□□□□□ -1.64
HRT1	YOL133W	GCN4	P03069	281 aa		4.79	□□□□□ -1.64
HRT1	YOL133W	CBS1	P14066	229 aa		4.79	□□□□□ -1.64
HRT1	YOL133W	GID7	P25569	745 aa		4.79	□□□□□ -1.64
HRT1	YOL133W	IMG1	P25626	169 aa		4.79	□□□□□ -1.64
HRT1	YOL133W	NDE1	P40215	560 aa		4.79	□□□□□ -1.64
HRT1	YOL133W	IRC6	P43615	237 aa		4.79	□□□□□ -1.64
HRT1	YOL133W	GUF1	P46943	645 aa		4.79	□□□□□ -1.64
HRT1	YOL133W	BOP3	P53958	396 aa		4.79	□□□□□ -1.64
HRT1	YOL133W	FMP40	Q08968	688 aa	Predicted RBP	4.79	□□□□□ -1.64
HRT1	YOL133W	RTP1	Q12751	981 aa		4.79	□□□□□ -1.64
HRT1	YOL133W	ARG81	P05085	880 aa		4.78	□□□□□ -1.64
HRT1	YOL133W	PRD1	P25375	712 aa		4.78	□□□□□ -1.64
HRT1	YOL133W	MGR1	P25573	417 aa		4.78	□□□□□ -1.64
HRT1	YOL133W	RPN12	P32496	274 aa		4.78	□□□□□ -1.64
HRT1	YOL133W	SRO77	P38163	1010 aa		4.78	□□□□□ -1.64
HRT1	YOL133W	YND1	P40009	630 aa		4.78	□□□□□ -1.64
HRT1	YOL133W	SPO22	P40511	975 aa		4.78	□□□□□ -1.64
HRT1	YOL133W	SMA1	Q02651	245 aa		4.78	□□□□□ -1.64
HRT1	YOL133W	TDA9	Q04545	1251 aa		4.78	□□□□□ -1.64
HRT1	YOL133W	RSF1	Q05043	376 aa		4.78	□□□□□ -1.64
HRT1	YOL133W	SNA4	Q07549	140 aa		4.78	□□□□□ -1.64
HRT1	YOL133W	ARG3	P05150	338 aa		4.77	□□□□□ -1.65
HRT1	YOL133W	BOS1	P25385	244 aa		4.77	□□□□□ -1.65
HRT1	YOL133W	YKL100C	P34248	587 aa		4.77	□□□□□ -1.65
HRT1	YOL133W	TCD2	P36101	447 aa	Known RBP	4.77	□□□□□ -1.65
HRT1	YOL133W	STV1	P37296	890 aa		4.77	□□□□□ -1.65
HRT1	YOL133W	ERP2	P39704	215 aa		4.77	□□□□□ -1.65
HRT1	YOL133W	VRG4	P40107	337 aa		4.77	□□□□□ -1.65
HRT1	YOL133W	IAH1	P41734	238 aa		4.77	□□□□□ -1.65
HRT1	YOL133W	YVH1	Q02256	364 aa	Known RBP	4.77	□□□□□ -1.65
HRT1	YOL133W	DIG1	Q03063	452 aa	Known RBP	4.77	□□□□□ -1.65
HRT1	YOL133W	COQ9	Q05779	260 aa		4.77	□□□□□ -1.65
HRT1	YOL133W	ECM30	Q06673	1274 aa		4.77	□□□□□ -1.65
HRT1	YOL133W	YAP7	Q08182	245 aa		4.77	□□□□□ -1.65
HRT1	YOL133W	YOR365C	Q08844	703 aa		4.77	□□□□□ -1.65
HRT1	YOL133W	PEP4	P07267	405 aa	Known RBP	4.76	□□□□□ -1.65
HRT1	YOL133W	CDC23	P16522	626 aa		4.76	□□□□□ -1.65
HRT1	YOL133W	ART10	P18634	518 aa	Known RBP	4.76	□□□□□ -1.65
HRT1	YOL133W	WBP1	P33767	430 aa	Known RBP	4.76	□□□□□ -1.65
HRT1	YOL133W	SGS1	P35187	1447 aa		4.76	□□□□□ -1.65
HRT1	YOL133W	MUM2	P38236	366 aa		4.76	□□□□□ -1.65
HRT1	YOL133W	MAF1	P41910	395 aa		4.76	□□□□□ -1.65
HRT1	YOL133W	AIM22	P47051	409 aa		4.76	□□□□□ -1.65
HRT1	YOL133W	IMD4	P50094	524 aa	Known RBP	4.76	□□□□□ -1.65
HRT1	YOL133W	YGR127W	P53275	312 aa		4.76	□□□□□ -1.65
HRT1	YOL133W	RBG2	P53295	368 aa	Known RBP	4.76	□□□□□ -1.65
HRT1	YOL133W	RLM1	Q12224	676 aa		4.76	□□□□□ -1.65
HRT1	YOL133W	PGA3	Q12746	312 aa	Known RBP	4.76	□□□□□ -1.65
HRT1	YOL133W	CDC31	P06704	161 aa	Known RBP	4.75	□□□□□ -1.65
HRT1	YOL133W	DFR1	P07807	211 aa	Known RBP RIP-Chip data	4.75	□□□□□ -1.65	not detected
HRT1	YOL133W	MRP7	P12687	371 aa		4.75	□□□□□ -1.65
HRT1	YOL133W	EST1	P17214	699 aa	Predicted RBP	4.75	□□□□□ -1.65
HRT1	YOL133W	RPL32	P38061	130 aa	Known RBP	4.75	□□□□□ -1.65
HRT1	YOL133W	LAG1	P38703	411 aa		4.75	□□□□□ -1.65
HRT1	YOL133W	MET30	P39014	640 aa		4.75	□□□□□ -1.65
HRT1	YOL133W	JJJ1	P53863	590 aa		4.75	□□□□□ -1.65
HRT1	YOL133W	DIC1	Q06143	298 aa		4.75	□□□□□ -1.65
HRT1	YOL133W	HNM1	P19807	563 aa		4.74	□□□□□ -1.65
HRT1	YOL133W	SEC1	P30619	724 aa	Known RBP	4.74	□□□□□ -1.65
HRT1	YOL133W	MRE11	P32829	692 aa		4.74	□□□□□ -1.65
HRT1	YOL133W	UBP11	P36026	717 aa		4.74	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 12 ms