RNA–Protein interactions for RNA: YNL257C

SIP3, Transcript of Transcription cofactor, yeast

Gene SIP3, Length 3,690 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIP3	YNL257C	YKL050C	P35736	922 aa		2.76	□□□□□ -1.97
SIP3	YNL257C	SNU114	P36048	1008 aa	Known RBP	2.76	□□□□□ -1.97
SIP3	YNL257C	MUP3	P38734	546 aa		2.76	□□□□□ -1.97
SIP3	YNL257C	HOS2	P53096	452 aa	Predicted RBP	2.76	□□□□□ -1.97
SIP3	YNL257C	NRD1	P53617	575 aa	Known RBP RIP-Chip data	2.76	□□□□□ -1.97	not detected
SIP3	YNL257C	HBT1	Q07653	1046 aa	Known RBP	2.76	□□□□□ -1.97
SIP3	YNL257C	LEA1	Q08963	238 aa	Predicted RBP	2.76	□□□□□ -1.97
SIP3	YNL257C	LSP1	Q12230	341 aa	Known RBP	2.76	□□□□□ -1.97
SIP3	YNL257C	AQY1	P0CD91	305 aa		2.76	□□□□□ -1.97
SIP3	YNL257C	APE1	P14904	514 aa		2.76	□□□□□ -1.97
SIP3	YNL257C	ADK2	P26364	225 aa		2.76	□□□□□ -1.97
SIP3	YNL257C	ADE17	P38009	592 aa	Known RBP	2.76	□□□□□ -1.97
SIP3	YNL257C	UBX6	P47049	396 aa		2.76	□□□□□ -1.97
SIP3	YNL257C	DFR1	P07807	211 aa	Known RBP RIP-Chip data	2.75	□□□□□ -1.97	not detected
SIP3	YNL257C	MAF1	P41910	395 aa		2.75	□□□□□ -1.97
SIP3	YNL257C	APT1	P49435	187 aa	Known RBP	2.75	□□□□□ -1.97
SIP3	YNL257C	RRP46	P53256	223 aa	Predicted RBP	2.75	□□□□□ -1.97
SIP3	YNL257C	MSC1	Q03104	513 aa		2.75	□□□□□ -1.97
SIP3	YNL257C	MRP13	P12686	339 aa		2.75	□□□□□ -1.97
SIP3	YNL257C	EST1	P17214	699 aa	Predicted RBP	2.75	□□□□□ -1.97
SIP3	YNL257C	ELO2	P25358	347 aa		2.75	□□□□□ -1.97
SIP3	YNL257C	YIH1	P25637	258 aa		2.75	□□□□□ -1.97
SIP3	YNL257C	DOT5	P40553	215 aa		2.75	□□□□□ -1.97
SIP3	YNL257C	SGF73	P53165	657 aa		2.75	□□□□□ -1.97
SIP3	YNL257C	EFM6	P53970	246 aa		2.75	□□□□□ -1.97
SIP3	YNL257C	RPA49	Q01080	415 aa	Predicted RBP	2.75	□□□□□ -1.97
SIP3	YNL257C	CTF4	Q01454	927 aa		2.75	□□□□□ -1.97
SIP3	YNL257C	ARX1	Q03862	593 aa	Known RBP	2.75	□□□□□ -1.97
SIP3	YNL257C	GFD1	Q04839	188 aa	Known RBP	2.75	□□□□□ -1.97
SIP3	YNL257C	PSR1	Q07800	427 aa		2.75	□□□□□ -1.97
SIP3	YNL257C	PSK1	P31374	1356 aa		2.75	□□□□□ -1.97
SIP3	YNL257C	PMS1	P14242	873 aa		2.75	□□□□□ -1.97
SIP3	YNL257C	KIN3	P22209	435 aa		2.75	□□□□□ -1.97
SIP3	YNL257C	TCD2	P36101	447 aa	Known RBP	2.75	□□□□□ -1.97
SIP3	YNL257C	ELO1	P39540	310 aa		2.75	□□□□□ -1.97
SIP3	YNL257C	BUR6	P40096	142 aa		2.75	□□□□□ -1.97
SIP3	YNL257C	RPS0B	P46654	252 aa	Known RBP	2.75	□□□□□ -1.97
SIP3	YNL257C	RPS10B	P46784	105 aa	Known RBP	2.75	□□□□□ -1.97
SIP3	YNL257C	DPB11	P47027	764 aa	Predicted RBP	2.75	□□□□□ -1.97
SIP3	YNL257C	RBS1	Q05672	457 aa	Known RBP	2.75	□□□□□ -1.97
SIP3	YNL257C	VPS38	Q05919	439 aa		2.75	□□□□□ -1.97
SIP3	YNL257C	LYS21	Q12122	440 aa	Known RBP	2.75	□□□□□ -1.97
SIP3	YNL257C	RLM1	Q12224	676 aa		2.75	□□□□□ -1.97
SIP3	YNL257C	YER145C-A	A0A023PYF4	145 aa		2.74	□□□□□ -1.97
SIP3	YNL257C	NAT1	P12945	854 aa	Known RBP	2.74	□□□□□ -1.97
SIP3	YNL257C	SUI2	P20459	304 aa	Known RBP	2.74	□□□□□ -1.97
SIP3	YNL257C	PUP3	P25451	205 aa	Known RBP	2.74	□□□□□ -1.97
SIP3	YNL257C	SPC110	P32380	944 aa		2.74	□□□□□ -1.97
SIP3	YNL257C	GCS1	P35197	352 aa		2.74	□□□□□ -1.97
SIP3	YNL257C	REG2	P38232	338 aa		2.74	□□□□□ -1.97
SIP3	YNL257C	DIA4	P38705	446 aa	Predicted RBP	2.74	□□□□□ -1.97
SIP3	YNL257C	RPS10A	Q08745	105 aa	Predicted RBP	2.74	□□□□□ -1.97
SIP3	YNL257C	INP53	Q12271	1107 aa		2.74	□□□□□ -1.97
SIP3	YNL257C	GAL80	P04387	435 aa		2.74	□□□□□ -1.97
SIP3	YNL257C	GSY2	P27472	705 aa		2.74	□□□□□ -1.97
SIP3	YNL257C	SSE2	P32590	693 aa	Known RBP	2.74	□□□□□ -1.97
SIP3	YNL257C	MRE11	P32829	692 aa		2.74	□□□□□ -1.97
SIP3	YNL257C	UGP1	P32861	499 aa	Known RBP	2.74	□□□□□ -1.97
SIP3	YNL257C	VID24	P38263	362 aa		2.74	□□□□□ -1.97
SIP3	YNL257C	UIP3	P39547	235 aa		2.74	□□□□□ -1.97
SIP3	YNL257C	IMD4	P50094	524 aa	Known RBP	2.74	□□□□□ -1.97
SIP3	YNL257C	BNI5	P53890	448 aa	Known RBP	2.74	□□□□□ -1.97
SIP3	YNL257C	YLR352W	Q06479	807 aa		2.74	□□□□□ -1.97
SIP3	YNL257C	SMC6	Q12749	1114 aa		2.74	□□□□□ -1.97
SIP3	YNL257C	SAT4	P25333	603 aa	Known RBP	2.74	□□□□□ -1.97
SIP3	YNL257C	CDC15	P27636	974 aa		2.74	□□□□□ -1.97
SIP3	YNL257C	SEC66	P33754	206 aa		2.74	□□□□□ -1.97
SIP3	YNL257C	PMT1	P33775	817 aa		2.74	□□□□□ -1.97
SIP3	YNL257C	OAR1	P35731	278 aa		2.74	□□□□□ -1.97
SIP3	YNL257C	CIN4	P39110	191 aa		2.74	□□□□□ -1.97
SIP3	YNL257C	YGR066C	P53242	292 aa		2.74	□□□□□ -1.97
SIP3	YNL257C	TAP42	Q04372	366 aa		2.74	□□□□□ -1.97
SIP3	YNL257C	ULA1	Q12059	462 aa		2.74	□□□□□ -1.97
SIP3	YNL257C	SFI1	Q12369	946 aa		2.74	□□□□□ -1.97
SIP3	YNL257C	MBR1	P23493	339 aa		2.73	□□□□□ -1.97
SIP3	YNL257C	PRD1	P25375	712 aa		2.73	□□□□□ -1.97
SIP3	YNL257C	BLI1	P35727	113 aa		2.73	□□□□□ -1.97
SIP3	YNL257C	UBP11	P36026	717 aa		2.73	□□□□□ -1.97
SIP3	YNL257C	YEL020C	P39994	560 aa		2.73	□□□□□ -1.97
SIP3	YNL257C	CIN1	P40987	1014 aa		2.73	□□□□□ -1.97
SIP3	YNL257C	PET130	P47065	347 aa		2.73	□□□□□ -1.97
SIP3	YNL257C	EAF7	P53911	425 aa	Known RBP	2.73	□□□□□ -1.97
SIP3	YNL257C	SXM1	Q04175	944 aa	Known RBP	2.73	□□□□□ -1.97
SIP3	YNL257C	HSP82	P02829	709 aa	Known RBP	2.73	□□□□□ -1.97
SIP3	YNL257C	URA7	P28274	579 aa	Known RBP	2.73	□□□□□ -1.97
SIP3	YNL257C	SOF1	P33750	489 aa	Known RBP	2.73	□□□□□ -1.97
SIP3	YNL257C	YJL068C	P40363	299 aa		2.73	□□□□□ -1.97
SIP3	YNL257C	PKP1	P40530	394 aa		2.73	□□□□□ -1.97
SIP3	YNL257C	IRC8	P47046	822 aa		2.73	□□□□□ -1.97
SIP3	YNL257C	YLR455W	Q06188	304 aa		2.73	□□□□□ -1.97
SIP3	YNL257C	RIM20	Q12033	661 aa		2.73	□□□□□ -1.97
SIP3	YNL257C	YLR111W	Q12528	110 aa		2.73	□□□□□ -1.97
SIP3	YNL257C	GPA1	P08539	472 aa		2.73	□□□□□ -1.97
SIP3	YNL257C	CDC60	P26637	1090 aa	Known RBP	2.73	□□□□□ -1.97
SIP3	YNL257C	YBR144C	P34215	104 aa		2.73	□□□□□ -1.97
SIP3	YNL257C	NUP133	P36161	1157 aa		2.73	□□□□□ -1.97
SIP3	YNL257C	PAC2	P39937	518 aa		2.73	□□□□□ -1.97
SIP3	YNL257C	MRX1	P40050	688 aa		2.73	□□□□□ -1.97
SIP3	YNL257C	OPT1	P40897	799 aa		2.73	□□□□□ -1.97
SIP3	YNL257C	YTP1	P53584	459 aa		2.73	□□□□□ -1.97

Retrieved 100 of 5,963 RNA–protein pairs in 20.3 ms