RNA–Protein interactions for RNA: YLR175W

CBF5, Transcript of Pseudouridine synthase catalytic subunit of box H/ACA snoRNPs, yeastyeast

Gene CBF5, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBF5YLR175W MRX1P40050 688 aa4.53□□□□□ -1.68
CBF5YLR175W MEP1P40260 492 aa4.53□□□□□ -1.68
CBF5YLR175W HOS4P40480 1083 aa4.53□□□□□ -1.68
CBF5YLR175W TES1P41903 349 aaKnown RBP4.53□□□□□ -1.68
CBF5YLR175W FAR3P46671 204 aa4.53□□□□□ -1.68
CBF5YLR175W YJL049WP47048 450 aa4.53□□□□□ -1.68
CBF5YLR175W TEL2P53038 688 aa4.53□□□□□ -1.68
CBF5YLR175W YNR014WP53719 212 aa4.53□□□□□ -1.68
CBF5YLR175W BIO5P53744 561 aaKnown RBP4.53□□□□□ -1.68
CBF5YLR175W YNL143CP53908 130 aa4.53□□□□□ -1.68
CBF5YLR175W SUB1P54000 292 aaKnown RBP4.53□□□□□ -1.68
CBF5YLR175W PEX13P80667 386 aa4.53□□□□□ -1.68
CBF5YLR175W NOG1Q02892 647 aaKnown RBP4.53□□□□□ -1.68
CBF5YLR175W YMR178WQ03219 274 aaKnown RBP4.53□□□□□ -1.68
CBF5YLR175W YMR265CQ03508 461 aaKnown RBP4.53□□□□□ -1.68
CBF5YLR175W HPT1Q04178 221 aaKnown RBP4.53□□□□□ -1.68
CBF5YLR175W CIA1Q05583 330 aa4.53□□□□□ -1.68
CBF5YLR175W YOL019WQ08157 551 aa4.53□□□□□ -1.68
CBF5YLR175W NUS1Q12063 375 aa4.53□□□□□ -1.68
CBF5YLR175W GLO4Q12320 285 aa4.53□□□□□ -1.68
CBF5YLR175W YMR084WA2P2R3 262 aa4.52□□□□□ -1.69
CBF5YLR175W SEC63P14906 663 aa4.52□□□□□ -1.69
CBF5YLR175W RPB4P20433 221 aaPredicted RBP4.52□□□□□ -1.69
CBF5YLR175W CTP1P38152 299 aa4.52□□□□□ -1.69
CBF5YLR175W HEK2P38199 381 aaKnown RBP RIP-Chip data4.52□□□□□ -1.69not detected
CBF5YLR175W DBP8P38719 431 aa4.52□□□□□ -1.69
CBF5YLR175W SHU2P38957 223 aa4.52□□□□□ -1.69
CBF5YLR175W MAD3P47074 515 aa4.52□□□□□ -1.69
CBF5YLR175W BOL2P53082 120 aa4.52□□□□□ -1.69
CBF5YLR175W YGR053CP53234 283 aa4.52□□□□□ -1.69
CBF5YLR175W CUZ1P53899 274 aa4.52□□□□□ -1.69
CBF5YLR175W NPL3Q01560 414 aaKnown RBP RIP-Chip data4.52□□□□□ -1.69not detected
CBF5YLR175W RNY1Q02933 434 aaKnown RBP4.52□□□□□ -1.69
CBF5YLR175W NHP10Q03435 203 aa4.52□□□□□ -1.69
CBF5YLR175W CLU1Q03690 1277 aaKnown RBP4.52□□□□□ -1.69
CBF5YLR175W YMR155WQ03795 547 aa4.52□□□□□ -1.69
CBF5YLR175W TVP15Q03860 143 aa4.52□□□□□ -1.69
CBF5YLR175W TY1A-MR1Q04215 440 aa4.52□□□□□ -1.69
CBF5YLR175W SPO20Q04359 397 aa4.52□□□□□ -1.69
CBF5YLR175W IRC10Q08118 586 aa4.52□□□□□ -1.69
CBF5YLR175W BUD7Q08754 746 aa4.52□□□□□ -1.69
CBF5YLR175W RTT10Q08924 1013 aa4.52□□□□□ -1.69
CBF5YLR175W CHS5Q12114 671 aaKnown RBP4.52□□□□□ -1.69
CBF5YLR175W MDY2Q12285 212 aa4.52□□□□□ -1.69
CBF5YLR175W YOR012WQ12351 137 aa4.52□□□□□ -1.69
CBF5YLR175W GTT2Q12390 233 aa4.52□□□□□ -1.69
CBF5YLR175W YPT6Q99260 215 aa4.52□□□□□ -1.69
CBF5YLR175W SEM1O94742 89 aa4.51□□□□□ -1.69
CBF5YLR175W RHO2P06781 192 aa4.51□□□□□ -1.69
CBF5YLR175W YMR085WP0CF18 432 aa4.51□□□□□ -1.69
CBF5YLR175W HSC82P15108 705 aaKnown RBP4.51□□□□□ -1.69
CBF5YLR175W GAL11P19659 1081 aa4.51□□□□□ -1.69
CBF5YLR175W PHO3P24031 467 aa4.51□□□□□ -1.69
CBF5YLR175W PHO84P25297 587 aaKnown RBP4.51□□□□□ -1.69
CBF5YLR175W YCR090CP25654 182 aaKnown RBP4.51□□□□□ -1.69
CBF5YLR175W YSC84P32793 468 aa4.51□□□□□ -1.69
CBF5YLR175W CSE1P33307 960 aa4.51□□□□□ -1.69
CBF5YLR175W PRP18P33411 251 aaPredicted RBP4.51□□□□□ -1.69
CBF5YLR175W THI80P35202 319 aa4.51□□□□□ -1.69
CBF5YLR175W YBR259WP38338 688 aa4.51□□□□□ -1.69
CBF5YLR175W ARP1P38696 384 aa4.51□□□□□ -1.69
CBF5YLR175W YHR045WP38775 560 aa4.51□□□□□ -1.69
CBF5YLR175W GDH3P39708 457 aa4.51□□□□□ -1.69
CBF5YLR175W AXL1P40851 1208 aa4.51□□□□□ -1.69
CBF5YLR175W EMC4P53073 190 aa4.51□□□□□ -1.69
CBF5YLR175W NMA2P53204 395 aa4.51□□□□□ -1.69
CBF5YLR175W UBX4P54730 416 aa4.51□□□□□ -1.69
CBF5YLR175W CCE1Q03702 353 aa4.51□□□□□ -1.69
CBF5YLR175W CSN9Q03981 162 aa4.51□□□□□ -1.69
CBF5YLR175W YDR444WQ04093 687 aa4.51□□□□□ -1.69
CBF5YLR175W HEL2Q05580 639 aaKnown RBP4.51□□□□□ -1.69
CBF5YLR175W YDL121CQ07541 149 aa4.51□□□□□ -1.69
CBF5YLR175W TMA46Q12000 345 aaKnown RBP4.51□□□□□ -1.69
CBF5YLR175W MRH1Q12117 320 aaPredicted RBP4.51□□□□□ -1.69
CBF5YLR175W ICT1Q12385 394 aa4.51□□□□□ -1.69
CBF5YLR175W HEM2P05373 342 aa4.5□□□□□ -1.69
CBF5YLR175W MPH2P0CD99 609 aa4.5□□□□□ -1.69
CBF5YLR175W PRP16P15938 1071 aaPredicted RBP4.5□□□□□ -1.69
CBF5YLR175W EXO70P19658 623 aa4.5□□□□□ -1.69
CBF5YLR175W BAS1P22035 811 aa4.5□□□□□ -1.69
CBF5YLR175W EPT1P22140 391 aa4.5□□□□□ -1.69
CBF5YLR175W MRPL9P31334 269 aa4.5□□□□□ -1.69
CBF5YLR175W DEP1P31385 405 aa4.5□□□□□ -1.69
CBF5YLR175W DUT1P33317 147 aa4.5□□□□□ -1.69
CBF5YLR175W TIP20P33891 701 aa4.5□□□□□ -1.69
CBF5YLR175W ASK1P35734 292 aa4.5□□□□□ -1.69
CBF5YLR175W YPT52P36018 234 aaKnown RBP4.5□□□□□ -1.69
CBF5YLR175W GDT1P38301 280 aaPredicted RBP4.5□□□□□ -1.69
CBF5YLR175W HSE1P38753 452 aa4.5□□□□□ -1.69
CBF5YLR175W MPT5P39016 859 aaKnown RBP RIP-Chip data4.5□□□□□ -1.69not detected
CBF5YLR175W TIM17P39515 158 aa4.5□□□□□ -1.69
CBF5YLR175W SER33P40510 469 aa4.5□□□□□ -1.69
CBF5YLR175W FAA4P47912 694 aaKnown RBP4.5□□□□□ -1.69
CBF5YLR175W COG7P53195 279 aa4.5□□□□□ -1.69
CBF5YLR175W SWC4P53201 476 aa4.5□□□□□ -1.69
CBF5YLR175W FRE4P53746 719 aa4.5□□□□□ -1.69
CBF5YLR175W YNR061CP53747 219 aa4.5□□□□□ -1.69
CBF5YLR175W VAC7P53950 1165 aa4.5□□□□□ -1.69
CBF5YLR175W SLM2P53955 656 aa4.5□□□□□ -1.69
CBF5YLR175W TGL2P54857 326 aa4.5□□□□□ -1.69
Retrieved 100 of 5,963 RNA–protein pairs in 44.3 ms