RNA–Protein interactions for RNA: YKR100C

SKG1, Transcript of Transmembrane protein with a role in cell wall polymer composition, yeast

Gene SKG1, Length 1,068 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKG1	YKR100C	ATO2	P32907	282 aa		5.74	□□□□□ -1.49
SKG1	YKR100C	PEX8	P53248	589 aa		5.74	□□□□□ -1.49
SKG1	YKR100C	YPR003C	P53394	754 aa		5.74	□□□□□ -1.49
SKG1	YKR100C	LSC1	P53598	329 aa	Known RBP	5.74	□□□□□ -1.49
SKG1	YKR100C	VTC3	Q02725	835 aa		5.74	□□□□□ -1.49
SKG1	YKR100C	SNA4	Q07549	140 aa		5.74	□□□□□ -1.49
SKG1	YKR100C	LAC1	P28496	418 aa		5.73	□□□□□ -1.49
SKG1	YKR100C	SCO2	P38072	301 aa		5.73	□□□□□ -1.49
SKG1	YKR100C	ARN1	P38731	627 aa		5.73	□□□□□ -1.49
SKG1	YKR100C	YGR079W	P53249	370 aa		5.73	□□□□□ -1.49
SKG1	YKR100C	YNL134C	P53912	376 aa	Known RBP	5.73	□□□□□ -1.49
SKG1	YKR100C	ECM22	Q05958	814 aa	Predicted RBP	5.73	□□□□□ -1.49
SKG1	YKR100C	PIF1	P07271	859 aa		5.72	□□□□□ -1.49
SKG1	YKR100C	MRP7	P12687	371 aa		5.72	□□□□□ -1.49
SKG1	YKR100C	SIR1	P21691	654 aa		5.72	□□□□□ -1.49
SKG1	YKR100C	CAB2	P40506	365 aa		5.72	□□□□□ -1.49
SKG1	YKR100C	TEP1	P53916	434 aa		5.72	□□□□□ -1.49
SKG1	YKR100C	YPL108W	Q02872	168 aa	Predicted RBP	5.72	□□□□□ -1.49
SKG1	YKR100C	YOR097C	Q12274	175 aa	Predicted RBP	5.72	□□□□□ -1.49
SKG1	YKR100C	HES1	P35843	434 aa		5.71	□□□□□ -1.5
SKG1	YKR100C	YPS6	P40583	537 aa		5.71	□□□□□ -1.5
SKG1	YKR100C	CDC1	P40986	491 aa		5.71	□□□□□ -1.5
SKG1	YKR100C	UBX6	P47049	396 aa		5.71	□□□□□ -1.5
SKG1	YKR100C	YPT11	P48559	417 aa		5.71	□□□□□ -1.5
SKG1	YKR100C	NUP53	Q03790	475 aa		5.71	□□□□□ -1.5
SKG1	YKR100C	SRL1	Q08673	210 aa		5.71	□□□□□ -1.5
SKG1	YKR100C	TMA7	Q3E764	64 aa	Known RBP	5.71	□□□□□ -1.5
SKG1	YKR100C	SST2	P11972	698 aa	Known RBP	5.7	□□□□□ -1.5
SKG1	YKR100C	GPI10	P30777	616 aa		5.7	□□□□□ -1.5
SKG1	YKR100C	CSE2	P33308	149 aa		5.7	□□□□□ -1.5
SKG1	YKR100C	SRX1	P36077	127 aa		5.7	□□□□□ -1.5
SKG1	YKR100C	YGL036W	P53185	909 aa	Predicted RBP	5.7	□□□□□ -1.5
SKG1	YKR100C	HEL2	Q05580	639 aa	Known RBP	5.7	□□□□□ -1.5
SKG1	YKR100C	BUD7	Q08754	746 aa		5.7	□□□□□ -1.5
SKG1	YKR100C	UBX3	Q12229	455 aa		5.7	□□□□□ -1.5
SKG1	YKR100C	PCD1	Q12524	340 aa		5.7	□□□□□ -1.5
SKG1	YKR100C	ADE3	P07245	946 aa	Known RBP	5.69	□□□□□ -1.5
SKG1	YKR100C	MAS1	P10507	462 aa		5.69	□□□□□ -1.5
SKG1	YKR100C	RIT1	P23796	513 aa		5.69	□□□□□ -1.5
SKG1	YKR100C	SWI4	P25302	1093 aa	Known RBP	5.69	□□□□□ -1.5
SKG1	YKR100C	GRX7	P38068	203 aa		5.69	□□□□□ -1.5
SKG1	YKR100C	DUG2	P38149	878 aa		5.69	□□□□□ -1.5
SKG1	YKR100C	YRB30	P53107	440 aa	Predicted RBP	5.69	□□□□□ -1.5
SKG1	YKR100C	YNL144C	P53907	740 aa		5.69	□□□□□ -1.5
SKG1	YKR100C	BOP3	P53958	396 aa		5.69	□□□□□ -1.5
SKG1	YKR100C	MOT3	P54785	490 aa	Known RBP	5.69	□□□□□ -1.5
SKG1	YKR100C	PDR8	Q06149	701 aa		5.69	□□□□□ -1.5
SKG1	YKR100C	YLR456W	Q06199	204 aa		5.69	□□□□□ -1.5
SKG1	YKR100C	RVB2	Q12464	471 aa	Known RBP	5.69	□□□□□ -1.5
SKG1	YKR100C	UBC1	P21734	215 aa	Known RBP	5.68	□□□□□ -1.5
SKG1	YKR100C	PGS1	P25578	521 aa		5.68	□□□□□ -1.5
SKG1	YKR100C	RME1	P32338	300 aa	Known RBP	5.68	□□□□□ -1.5
SKG1	YKR100C	APM3	P38153	483 aa		5.68	□□□□□ -1.5
SKG1	YKR100C	YIL152W	P40455	235 aa		5.68	□□□□□ -1.5
SKG1	YKR100C	CHS6	P40955	746 aa		5.68	□□□□□ -1.5
SKG1	YKR100C	NRM1	P53718	249 aa		5.68	□□□□□ -1.5
SKG1	YKR100C	ATG21	Q02887	496 aa		5.68	□□□□□ -1.5
SKG1	YKR100C	YDR109C	Q04585	715 aa		5.68	□□□□□ -1.5
SKG1	YKR100C	IWR1	Q07532	353 aa	Predicted RBP	5.68	□□□□□ -1.5
SKG1	YKR100C	RPL4A	P10664	362 aa	Known RBP	5.67	□□□□□ -1.5
SKG1	YKR100C	QRI7	P43122	407 aa		5.67	□□□□□ -1.5
SKG1	YKR100C	RPL4B	P49626	362 aa	Known RBP	5.67	□□□□□ -1.5
SKG1	YKR100C	GTB1	Q04924	702 aa		5.67	□□□□□ -1.5
SKG1	YKR100C	EIS1	Q05050	843 aa	Known RBP	5.67	□□□□□ -1.5
SKG1	YKR100C	BRE1	Q07457	700 aa	Known RBP	5.67	□□□□□ -1.5
SKG1	YKR100C	DSE3	Q08729	430 aa		5.67	□□□□□ -1.5
SKG1	YKR100C	ATP1	P07251	545 aa	Known RBP	5.66	□□□□□ -1.5
SKG1	YKR100C	GAC1	P28006	793 aa		5.66	□□□□□ -1.5
SKG1	YKR100C	TPA1	P40032	644 aa	Known RBP	5.66	□□□□□ -1.5
SKG1	YKR100C	IML2	P47031	731 aa		5.66	□□□□□ -1.5
SKG1	YKR100C	MET14	Q02196	202 aa		5.66	□□□□□ -1.5
SKG1	YKR100C	PLP2	Q12017	286 aa		5.66	□□□□□ -1.5
SKG1	YKR100C	YRA1	Q12159	226 aa	Known RBP	5.66	□□□□□ -1.5
SKG1	YKR100C	VPS41	P38959	992 aa		5.65	□□□□□ -1.5
SKG1	YKR100C	YMR034C	Q05131	434 aa	Predicted RBP	5.65	□□□□□ -1.5
SKG1	YKR100C	YPL272C	Q08984	517 aa		5.65	□□□□□ -1.5
SKG1	YKR100C	PKH2	Q12236	1081 aa	Known RBP	5.65	□□□□□ -1.5
SKG1	YKR100C	GAL1	P04385	528 aa		5.64	□□□□□ -1.51
SKG1	YKR100C	PET122	P10355	254 aa		5.64	□□□□□ -1.51
SKG1	YKR100C	YCR043C	P25361	127 aa		5.64	□□□□□ -1.51
SKG1	YKR100C	ARP2	P32381	391 aa	Known RBP	5.64	□□□□□ -1.51
SKG1	YKR100C	HIS6	P40545	261 aa		5.64	□□□□□ -1.51
SKG1	YKR100C	MSY1	P48527	492 aa		5.64	□□□□□ -1.51
SKG1	YKR100C	MLH2	Q07980	695 aa		5.64	□□□□□ -1.51
SKG1	YKR100C	GSH2	Q08220	491 aa		5.64	□□□□□ -1.51
SKG1	YKR100C	RPL42A	P0CX27	106 aa	Known RBP	5.63	□□□□□ -1.51
SKG1	YKR100C	RPL42B	P0CX28	106 aa	Known RBP	5.63	□□□□□ -1.51
SKG1	YKR100C	IMP2'	P32351	346 aa		5.63	□□□□□ -1.51
SKG1	YKR100C	TVP38	P36164	337 aa		5.63	□□□□□ -1.51
SKG1	YKR100C	ARC40	P38328	384 aa	Known RBP	5.63	□□□□□ -1.51
SKG1	YKR100C	SPC72	P39723	622 aa		5.63	□□□□□ -1.51
SKG1	YKR100C	HMF1	P40037	129 aa	Known RBP	5.63	□□□□□ -1.51
SKG1	YKR100C	EAF7	P53911	425 aa	Known RBP	5.63	□□□□□ -1.51
SKG1	YKR100C	MLC2	Q06580	163 aa		5.63	□□□□□ -1.51
SKG1	YKR100C	MCH4	Q08268	501 aa		5.63	□□□□□ -1.51
SKG1	YKR100C	MSS18	P08593	268 aa		5.62	□□□□□ -1.51
SKG1	YKR100C	BAT1	P38891	393 aa	Known RBP	5.62	□□□□□ -1.51
SKG1	YKR100C	TES1	P41903	349 aa	Known RBP	5.62	□□□□□ -1.51
SKG1	YKR100C	IMA1	P53051	589 aa		5.62	□□□□□ -1.51
SKG1	YKR100C	CPR6	P53691	371 aa	Known RBP	5.62	□□□□□ -1.51

Retrieved 100 of 5,963 RNA–protein pairs in 63.9 ms