RNA–Protein interactions for RNA: YKR029C

SET3, Transcript of Defining member of the SET3 histone deacetylase complex, yeastyeast

Gene SET3, Length 2,256 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SET3YKR029C LCL3P53153 274 aa1.31□□□□□ -2.2
SET3YKR029C YGL082WP53155 381 aa1.31□□□□□ -2.2
SET3YKR029C SGF73P53165 657 aa1.31□□□□□ -2.2
SET3YKR029C YTP1P53584 459 aa1.31□□□□□ -2.2
SET3YKR029C DUG3P53871 357 aa1.31□□□□□ -2.2
SET3YKR029C MRPL19P53875 158 aa1.31□□□□□ -2.2
SET3YKR029C NGL3Q03210 505 aa1.31□□□□□ -2.2
SET3YKR029C YLR281CQ05863 155 aa1.31□□□□□ -2.2
SET3YKR029C VPS38Q05919 439 aa1.31□□□□□ -2.2
SET3YKR029C ATG26Q06321 1198 aa1.31□□□□□ -2.2
SET3YKR029C SDH5Q08230 162 aa1.31□□□□□ -2.2
SET3YKR029C RDR1Q08904 546 aa1.31□□□□□ -2.2
SET3YKR029C YPT6Q99260 215 aa1.31□□□□□ -2.2
SET3YKR029C ARG3P05150 338 aa1.31□□□□□ -2.2
SET3YKR029C PUT2P07275 575 aa1.31□□□□□ -2.2
SET3YKR029C MET8P15807 274 aa1.31□□□□□ -2.2
SET3YKR029C PDA1P16387 420 aaKnown RBP1.31□□□□□ -2.2
SET3YKR029C KAR3P17119 729 aa1.31□□□□□ -2.2
SET3YKR029C EST1P17214 699 aaPredicted RBP1.31□□□□□ -2.2
SET3YKR029C ART10P18634 518 aaKnown RBP1.31□□□□□ -2.2
SET3YKR029C AIM17P23180 465 aaKnown RBP1.31□□□□□ -2.2
SET3YKR029C YBL055CP34220 418 aaPredicted RBP1.31□□□□□ -2.2
SET3YKR029C YKL100CP34248 587 aa1.31□□□□□ -2.2
SET3YKR029C ASK1P35734 292 aa1.31□□□□□ -2.2
SET3YKR029C RPL32P38061 130 aaKnown RBP1.31□□□□□ -2.2
SET3YKR029C YPK3P38070 525 aa1.31□□□□□ -2.2
SET3YKR029C NPR2P39923 615 aa1.31□□□□□ -2.2
SET3YKR029C LYS4P49367 693 aaPredicted RBP1.31□□□□□ -2.2
SET3YKR029C YGR126WP53274 230 aa1.31□□□□□ -2.2
SET3YKR029C RSM23Q01163 450 aa1.31□□□□□ -2.2
SET3YKR029C IZH1Q03419 316 aa1.31□□□□□ -2.2
SET3YKR029C YDR239CQ03780 787 aa1.31□□□□□ -2.2
SET3YKR029C YMR160WQ03823 816 aa1.31□□□□□ -2.2
SET3YKR029C FIN1Q03898 291 aa1.31□□□□□ -2.2
SET3YKR029C TDA9Q04545 1251 aa1.31□□□□□ -2.2
SET3YKR029C YLR287CQ05881 355 aa1.31□□□□□ -2.2
SET3YKR029C YDL218WQ07629 317 aa1.31□□□□□ -2.2
SET3YKR029C RIM20Q12033 661 aa1.31□□□□□ -2.2
SET3YKR029C YLR112WQ12130 139 aa1.31□□□□□ -2.2
SET3YKR029C PUF2Q12221 1075 aaKnown RBP RIP-Chip data1.31□□□□□ -2.2not detected
SET3YKR029C HER1Q12276 1246 aa1.31□□□□□ -2.2
SET3YKR029C SPE4Q12455 300 aa1.31□□□□□ -2.2
SET3YKR029C EDE1P34216 1381 aa1.3□□□□□ -2.2
SET3YKR029C TY1B-DR4Q07793 1604 aa1.3□□□□□ -2.2
SET3YKR029C CBP1P07252 654 aa1.3□□□□□ -2.2
SET3YKR029C YER190C-BP0CX94 160 aa1.3□□□□□ -2.2
SET3YKR029C YEL077W-AP0CX95 160 aa1.3□□□□□ -2.2
SET3YKR029C YGR296C-BP0CX96 160 aa1.3□□□□□ -2.2
SET3YKR029C YPL283W-BP0CX97 160 aa1.3□□□□□ -2.2
SET3YKR029C YPR204C-AP0CX98 160 aa1.3□□□□□ -2.2
SET3YKR029C SNF3P10870 884 aa1.3□□□□□ -2.2
SET3YKR029C RED1P14291 827 aa1.3□□□□□ -2.2
SET3YKR029C CKA1P15790 372 aa1.3□□□□□ -2.2
SET3YKR029C FUR1P18562 216 aaKnown RBP1.3□□□□□ -2.2
SET3YKR029C SNC1P31109 117 aa1.3□□□□□ -2.2
SET3YKR029C YME1P32795 747 aa1.3□□□□□ -2.2
SET3YKR029C YNK1P36010 153 aaKnown RBP1.3□□□□□ -2.2
SET3YKR029C YKL023WP36103 277 aaKnown RBP1.3□□□□□ -2.2
SET3YKR029C NUP133P36161 1157 aa1.3□□□□□ -2.2
SET3YKR029C MNN2P38069 597 aa1.3□□□□□ -2.2
SET3YKR029C CST26P38226 397 aa1.3□□□□□ -2.2
SET3YKR029C VID24P38263 362 aa1.3□□□□□ -2.2
SET3YKR029C LAG1P38703 411 aa1.3□□□□□ -2.2
SET3YKR029C OTU2P38747 307 aaKnown RBP1.3□□□□□ -2.2
SET3YKR029C ANS1P38832 159 aa1.3□□□□□ -2.2
SET3YKR029C PHO90P39535 881 aa1.3□□□□□ -2.2
SET3YKR029C PCL6P40038 420 aa1.3□□□□□ -2.2
SET3YKR029C DOT5P40553 215 aa1.3□□□□□ -2.2
SET3YKR029C IRC6P43615 237 aa1.3□□□□□ -2.2
SET3YKR029C ALK1P43633 760 aaKnown RBP1.3□□□□□ -2.2
SET3YKR029C APT1P49435 187 aaKnown RBP1.3□□□□□ -2.2
SET3YKR029C CUL3P53202 744 aa1.3□□□□□ -2.2
SET3YKR029C SOL4P53315 255 aa1.3□□□□□ -2.2
SET3YKR029C SCW4P53334 386 aaKnown RBP1.3□□□□□ -2.2
SET3YKR029C IPI3P53877 555 aa1.3□□□□□ -2.2
SET3YKR029C TIM10P87108 93 aa1.3□□□□□ -2.2
SET3YKR029C YVH1Q02256 364 aaKnown RBP1.3□□□□□ -2.2
SET3YKR029C SSK1Q07084 712 aa1.3□□□□□ -2.2
SET3YKR029C DSE3Q08729 430 aa1.3□□□□□ -2.2
SET3YKR029C BUD7Q08754 746 aa1.3□□□□□ -2.2
SET3YKR029C BRR1Q99177 341 aaPredicted RBP1.3□□□□□ -2.2
SET3YKR029C GAL80P04387 435 aa1.29□□□□□ -2.2
SET3YKR029C GID7P25569 745 aa1.29□□□□□ -2.2
SET3YKR029C ECM32P32644 1121 aaKnown RBP1.29□□□□□ -2.2
SET3YKR029C TCD2P36101 447 aaKnown RBP1.29□□□□□ -2.2
SET3YKR029C MIC60P36112 540 aa1.29□□□□□ -2.2
SET3YKR029C UBA4P38820 440 aa1.29□□□□□ -2.2
SET3YKR029C CCT6P39079 546 aa1.29□□□□□ -2.2
SET3YKR029C SPO22P40511 975 aa1.29□□□□□ -2.2
SET3YKR029C MET28P40573 187 aa1.29□□□□□ -2.2
SET3YKR029C MAF1P41910 395 aa1.29□□□□□ -2.2
SET3YKR029C ROK1P45818 564 aaPredicted RBP1.29□□□□□ -2.2
SET3YKR029C IMD4P50094 524 aaKnown RBP1.29□□□□□ -2.2
SET3YKR029C TWF1P53250 332 aa1.29□□□□□ -2.2
SET3YKR029C ARE2P53629 642 aaKnown RBP1.29□□□□□ -2.2
SET3YKR029C SMM1P53720 384 aaKnown RBP1.29□□□□□ -2.2
SET3YKR029C RPL15BP54780 204 aaPredicted RBP1.29□□□□□ -2.2
SET3YKR029C YDR415CQ04033 374 aaPredicted RBP1.29□□□□□ -2.2
SET3YKR029C SYF1Q04048 859 aaPredicted RBP1.29□□□□□ -2.2
SET3YKR029C RSF1Q05043 376 aa1.29□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms