RNA–Protein interactions for RNA: YJL220W

YJL220W, Transcript of Dubious open reading frame, yeast

Gene YJL220W, Length 453 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YJL220W	YJL220W	YCR006C	P25350	157 aa		4.63	□□□□□ -1.67
YJL220W	YJL220W	SIN4	P32259	974 aa		4.63	□□□□□ -1.67
YJL220W	YJL220W	DBF4	P32325	704 aa		4.63	□□□□□ -1.67
YJL220W	YJL220W	MKK2	P32491	506 aa		4.63	□□□□□ -1.67
YJL220W	YJL220W	PET309	P32522	965 aa	Predicted RBP	4.63	□□□□□ -1.67
YJL220W	YJL220W	DOM34	P33309	386 aa		4.63	□□□□□ -1.67
YJL220W	YJL220W	SKN1	P33336	771 aa		4.63	□□□□□ -1.67
YJL220W	YJL220W	MPE1	P35728	441 aa	Known RBP	4.63	□□□□□ -1.67
YJL220W	YJL220W	YHR033W	P38690	423 aa		4.63	□□□□□ -1.67
YJL220W	YJL220W	LYS1	P38998	373 aa	RIP-Chip data	4.63	□□□□□ -1.67	not detected
YJL220W	YJL220W	RGI2	P40188	164 aa		4.63	□□□□□ -1.67
YJL220W	YJL220W	MND2	P40577	368 aa		4.63	□□□□□ -1.67
YJL220W	YJL220W	TFG2	P41896	400 aa	Predicted RBP	4.63	□□□□□ -1.67
YJL220W	YJL220W	YJL107C	P42947	387 aa		4.63	□□□□□ -1.67
YJL220W	YJL220W	PEX25	Q02969	394 aa		4.63	□□□□□ -1.67
YJL220W	YJL220W	RLI1	Q03195	608 aa	Known RBP	4.63	□□□□□ -1.67
YJL220W	YJL220W	ARX1	Q03862	593 aa	Known RBP	4.63	□□□□□ -1.67
YJL220W	YJL220W	YDR132C	Q03900	495 aa		4.63	□□□□□ -1.67
YJL220W	YJL220W	RSF1	Q05043	376 aa		4.63	□□□□□ -1.67
YJL220W	YJL220W	ENT2	Q05785	613 aa		4.63	□□□□□ -1.67
YJL220W	YJL220W	NRT1	Q08485	598 aa		4.63	□□□□□ -1.67
YJL220W	YJL220W	DIN7	Q12086	430 aa		4.63	□□□□□ -1.67
YJL220W	YJL220W	YVC1	Q12324	675 aa		4.63	□□□□□ -1.67
YJL220W	YJL220W	SEM1	O94742	89 aa		4.62	□□□□□ -1.67
YJL220W	YJL220W	HOP1	P20050	605 aa		4.62	□□□□□ -1.67
YJL220W	YJL220W	CLN1	P20437	546 aa		4.62	□□□□□ -1.67
YJL220W	YJL220W	SEC65	P29478	273 aa		4.62	□□□□□ -1.67
YJL220W	YJL220W	PUB1	P32588	453 aa	Known RBP RIP-Chip data	4.62	□□□□□ -1.67	not detected
YJL220W	YJL220W	GDA1	P32621	518 aa		4.62	□□□□□ -1.67
YJL220W	YJL220W	RAD5	P32849	1169 aa	Predicted RBP	4.62	□□□□□ -1.67
YJL220W	YJL220W	BLI1	P35727	113 aa		4.62	□□□□□ -1.67
YJL220W	YJL220W	NTR2	P36118	322 aa	Predicted RBP	4.62	□□□□□ -1.67
YJL220W	YJL220W	ALG3	P38179	458 aa		4.62	□□□□□ -1.67
YJL220W	YJL220W	DIA4	P38705	446 aa	Predicted RBP	4.62	□□□□□ -1.67
YJL220W	YJL220W	PCL5	P38794	229 aa		4.62	□□□□□ -1.67
YJL220W	YJL220W	SPC72	P39723	622 aa		4.62	□□□□□ -1.67
YJL220W	YJL220W	YEL073C	P39974	107 aa		4.62	□□□□□ -1.67
YJL220W	YJL220W	YAT2	P40017	923 aa		4.62	□□□□□ -1.67
YJL220W	YJL220W	LRO1	P40345	661 aa		4.62	□□□□□ -1.67
YJL220W	YJL220W	SAP4	P53036	818 aa		4.62	□□□□□ -1.67
YJL220W	YJL220W	YGR021W	P53212	290 aa		4.62	□□□□□ -1.67
YJL220W	YJL220W	ZRG17	P53735	605 aa		4.62	□□□□□ -1.67
YJL220W	YJL220W	NOG2	P53742	486 aa	Known RBP	4.62	□□□□□ -1.67
YJL220W	YJL220W	FRE4	P53746	719 aa		4.62	□□□□□ -1.67
YJL220W	YJL220W	UME1	Q03010	460 aa		4.62	□□□□□ -1.67
YJL220W	YJL220W	ARP9	Q05123	467 aa		4.62	□□□□□ -1.67
YJL220W	YJL220W	ESC2	Q06340	456 aa		4.62	□□□□□ -1.67
YJL220W	YJL220W	YLR001C	Q07895	862 aa		4.62	□□□□□ -1.67
YJL220W	YJL220W	CDC34	P14682	295 aa		4.61	□□□□□ -1.67
YJL220W	YJL220W	SLY1	P22213	666 aa		4.61	□□□□□ -1.67
YJL220W	YJL220W	VPS34	P22543	875 aa		4.61	□□□□□ -1.67
YJL220W	YJL220W	IMG1	P25626	169 aa		4.61	□□□□□ -1.67
YJL220W	YJL220W	SEF1	P34228	1148 aa		4.61	□□□□□ -1.67
YJL220W	YJL220W	MGS1	P40151	587 aa		4.61	□□□□□ -1.67
YJL220W	YJL220W	ARG2	P40360	574 aa		4.61	□□□□□ -1.67
YJL220W	YJL220W	IRR1	P40541	1150 aa		4.61	□□□□□ -1.67
YJL220W	YJL220W	TES1	P41903	349 aa	Known RBP	4.61	□□□□□ -1.67
YJL220W	YJL220W	IKS1	P47042	667 aa		4.61	□□□□□ -1.67
YJL220W	YJL220W	YGL260W	P53056	76 aa		4.61	□□□□□ -1.67
YJL220W	YJL220W	GND2	P53319	492 aa		4.61	□□□□□ -1.67
YJL220W	YJL220W	SDH1	Q00711	640 aa		4.61	□□□□□ -1.67
YJL220W	YJL220W	NUP100	Q02629	959 aa		4.61	□□□□□ -1.67
YJL220W	YJL220W	RRP45	Q05636	305 aa	Known RBP	4.61	□□□□□ -1.67
YJL220W	YJL220W	OPY2	Q06810	360 aa		4.61	□□□□□ -1.67
YJL220W	YJL220W	FMP45	Q07651	309 aa		4.61	□□□□□ -1.67
YJL220W	YJL220W	BRE4	Q07660	1125 aa		4.61	□□□□□ -1.67
YJL220W	YJL220W	TMA46	Q12000	345 aa	Known RBP	4.61	□□□□□ -1.67
YJL220W	YJL220W	PFA4	Q12006	378 aa		4.61	□□□□□ -1.67
YJL220W	YJL220W	GTT2	Q12390	233 aa		4.61	□□□□□ -1.67
YJL220W	YJL220W	HSH49	Q99181	213 aa	Predicted RBP	4.61	□□□□□ -1.67
YJL220W	YJL220W	BCY1	P07278	416 aa	Known RBP	4.6	□□□□□ -1.67
YJL220W	YJL220W	ILS1	P09436	1072 aa	Known RBP	4.6	□□□□□ -1.67
YJL220W	YJL220W	PMS1	P14242	873 aa		4.6	□□□□□ -1.67
YJL220W	YJL220W	URA4	P20051	364 aa		4.6	□□□□□ -1.67
YJL220W	YJL220W	SYP1	P25623	870 aa	Known RBP	4.6	□□□□□ -1.67
YJL220W	YJL220W	IMP3	P32899	183 aa	Predicted RBP	4.6	□□□□□ -1.67
YJL220W	YJL220W	DUT1	P33317	147 aa		4.6	□□□□□ -1.67
YJL220W	YJL220W	STB6	P36085	766 aa		4.6	□□□□□ -1.67
YJL220W	YJL220W	CTP1	P38152	299 aa		4.6	□□□□□ -1.67
YJL220W	YJL220W	TRM7	P38238	310 aa	Known RBP	4.6	□□□□□ -1.67
YJL220W	YJL220W	YHL012W	P38709	493 aa		4.6	□□□□□ -1.67
YJL220W	YJL220W	FLC2	P39719	783 aa		4.6	□□□□□ -1.67
YJL220W	YJL220W	IME4	P41833	600 aa		4.6	□□□□□ -1.67
YJL220W	YJL220W	HLJ1	P48353	224 aa		4.6	□□□□□ -1.67
YJL220W	YJL220W	NNF2	P53253	936 aa		4.6	□□□□□ -1.67
YJL220W	YJL220W	ARE2	P53629	642 aa	Known RBP	4.6	□□□□□ -1.67
YJL220W	YJL220W	JJJ1	P53863	590 aa		4.6	□□□□□ -1.67
YJL220W	YJL220W	EFM6	P53970	246 aa		4.6	□□□□□ -1.67
YJL220W	YJL220W	BLS1	Q06071	122 aa		4.6	□□□□□ -1.67
YJL220W	YJL220W	GRS2	Q06817	618 aa		4.6	□□□□□ -1.67
YJL220W	YJL220W	NEW1	Q08972	1196 aa	Known RBP	4.6	□□□□□ -1.67
YJL220W	YJL220W	YLL056C	Q12177	298 aa		4.6	□□□□□ -1.67
YJL220W	YJL220W	YLR149C	Q99296	730 aa		4.6	□□□□□ -1.67
YJL220W	YJL220W	HOM3	P10869	527 aa		4.59	□□□□□ -1.67
YJL220W	YJL220W	CLN2	P20438	545 aa		4.59	□□□□□ -1.67
YJL220W	YJL220W	NRP1	P32770	719 aa	Known RBP RIP-Chip data	4.59	□□□□□ -1.67	not detected
YJL220W	YJL220W	PRP18	P33411	251 aa	Predicted RBP	4.59	□□□□□ -1.67
YJL220W	YJL220W	VPS24	P36095	224 aa	Known RBP	4.59	□□□□□ -1.67
YJL220W	YJL220W	MRPL15	P36523	253 aa		4.59	□□□□□ -1.67
YJL220W	YJL220W	STT4	P37297	1900 aa		4.59	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 35.4 ms