RNA–Protein interactions for RNA: YJL047C

RTT101, Transcript of Cullin subunit of a Roc1p-dependent E3 ubiquitin ligase complex, yeastyeast

Gene RTT101, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTT101YJL047C LRE1P25579 583 aaKnown RBP2.04□□□□□ -2.08
RTT101YJL047C YIM1P28625 365 aa2.04□□□□□ -2.08
RTT101YJL047C DCG1P32460 244 aa2.04□□□□□ -2.08
RTT101YJL047C DSS4P32601 143 aa2.04□□□□□ -2.08
RTT101YJL047C UGP1P32861 499 aaKnown RBP2.04□□□□□ -2.08
RTT101YJL047C SKI2P35207 1287 aaKnown RBP RIP-Chip data2.04□□□□□ -2.08not detected
RTT101YJL047C CAB3P36076 571 aa2.04□□□□□ -2.08
RTT101YJL047C RFC5P38251 354 aa2.04□□□□□ -2.08
RTT101YJL047C MSG5P38590 489 aa2.04□□□□□ -2.08
RTT101YJL047C ARO9P38840 513 aaPredicted RBP2.04□□□□□ -2.08
RTT101YJL047C YMR124WP39523 943 aaKnown RBP2.04□□□□□ -2.08
RTT101YJL047C TMN3P40071 706 aa2.04□□□□□ -2.08
RTT101YJL047C NET1P47035 1189 aa2.04□□□□□ -2.08
RTT101YJL047C LIA1P47120 325 aaKnown RBP2.04□□□□□ -2.08
RTT101YJL047C VID30P53076 958 aa2.04□□□□□ -2.08
RTT101YJL047C YGR079WP53249 370 aa2.04□□□□□ -2.08
RTT101YJL047C MRPS35P53292 345 aa2.04□□□□□ -2.08
RTT101YJL047C TEX1P53851 422 aaKnown RBP2.04□□□□□ -2.08
RTT101YJL047C BOP3P53958 396 aa2.04□□□□□ -2.08
RTT101YJL047C SLU7Q02775 382 aaKnown RBP2.04□□□□□ -2.08
RTT101YJL047C INA17Q02888 182 aa2.04□□□□□ -2.08
RTT101YJL047C SNZ1Q03148 297 aa2.04□□□□□ -2.08
RTT101YJL047C YOR012WQ12351 137 aa2.04□□□□□ -2.08
RTT101YJL047C YLR278CQ05854 1341 aa2.04□□□□□ -2.08
RTT101YJL047C SUP35P05453 685 aaKnown RBP2.03□□□□□ -2.08
RTT101YJL047C ILV5P06168 395 aaKnown RBP2.03□□□□□ -2.08
RTT101YJL047C ILV2P07342 687 aaKnown RBP2.03□□□□□ -2.08
RTT101YJL047C PDA1P16387 420 aaKnown RBP2.03□□□□□ -2.08
RTT101YJL047C CLN1P20437 546 aa2.03□□□□□ -2.08
RTT101YJL047C YSP3P25036 478 aa2.03□□□□□ -2.08
RTT101YJL047C ELO2P25358 347 aa2.03□□□□□ -2.08
RTT101YJL047C EMC1P25574 760 aa2.03□□□□□ -2.08
RTT101YJL047C GEX1P25596 615 aa2.03□□□□□ -2.08
RTT101YJL047C PDB1P32473 366 aaKnown RBP2.03□□□□□ -2.08
RTT101YJL047C SSE2P32590 693 aaKnown RBP2.03□□□□□ -2.08
RTT101YJL047C HCS1P34243 683 aa2.03□□□□□ -2.08
RTT101YJL047C PTK1P36002 662 aaPredicted RBP2.03□□□□□ -2.08
RTT101YJL047C YKL070WP36087 169 aa2.03□□□□□ -2.08
RTT101YJL047C YJL193WP39542 402 aa2.03□□□□□ -2.08
RTT101YJL047C FKH2P41813 862 aa2.03□□□□□ -2.08
RTT101YJL047C LOC1P43586 204 aaPredicted RBP2.03□□□□□ -2.08
RTT101YJL047C IRC8P47046 822 aa2.03□□□□□ -2.08
RTT101YJL047C YGR149WP48236 432 aa2.03□□□□□ -2.08
RTT101YJL047C YIP5P53108 310 aa2.03□□□□□ -2.08
RTT101YJL047C RMD9P53140 646 aaKnown RBP2.03□□□□□ -2.08
RTT101YJL047C MPS2P53159 387 aa2.03□□□□□ -2.08
RTT101YJL047C HOP2P53187 214 aa2.03□□□□□ -2.08
RTT101YJL047C SCW11P53189 542 aa2.03□□□□□ -2.08
RTT101YJL047C RPT4P53549 437 aaKnown RBP2.03□□□□□ -2.08
RTT101YJL047C MPP6P53725 186 aaPredicted RBP2.03□□□□□ -2.08
RTT101YJL047C SIZ1Q04195 904 aa2.03□□□□□ -2.08
RTT101YJL047C BOP2Q06150 570 aa2.03□□□□□ -2.08
RTT101YJL047C ARR1Q06596 294 aa2.03□□□□□ -2.08
RTT101YJL047C YFH1Q07540 174 aa2.03□□□□□ -2.08
RTT101YJL047C GAS5Q08193 484 aa2.03□□□□□ -2.08
RTT101YJL047C FMP40Q08968 688 aaPredicted RBP2.03□□□□□ -2.08
RTT101YJL047C STE2D6VTK4 431 aa2.03□□□□□ -2.08
RTT101YJL047C SEC12P11655 471 aa2.03□□□□□ -2.08
RTT101YJL047C SAG1P20840 650 aa2.03□□□□□ -2.08
RTT101YJL047C SEC62P21825 274 aa2.03□□□□□ -2.08
RTT101YJL047C RPL5P26321 297 aaKnown RBP2.03□□□□□ -2.08
RTT101YJL047C MGM101P32787 269 aaKnown RBP2.03□□□□□ -2.08
RTT101YJL047C AIM26P32858 118 aa2.03□□□□□ -2.08
RTT101YJL047C MNL1P38888 796 aa2.03□□□□□ -2.08
RTT101YJL047C YJL206CP39529 758 aa2.03□□□□□ -2.08
RTT101YJL047C AIM20P40451 204 aa2.03□□□□□ -2.08
RTT101YJL047C YJL107CP42947 387 aa2.03□□□□□ -2.08
RTT101YJL047C RFX1P48743 811 aa2.03□□□□□ -2.08
RTT101YJL047C MTL1P53214 551 aa2.03□□□□□ -2.08
RTT101YJL047C FHN1P53279 174 aa2.03□□□□□ -2.08
RTT101YJL047C GIM3P53900 129 aa2.03□□□□□ -2.08
RTT101YJL047C YNL134CP53912 376 aaKnown RBP2.03□□□□□ -2.08
RTT101YJL047C YMR102CQ03177 834 aa2.03□□□□□ -2.08
RTT101YJL047C RSM28Q03430 361 aa2.03□□□□□ -2.08
RTT101YJL047C PDS5Q04264 1277 aa2.03□□□□□ -2.08
RTT101YJL047C SEG1Q04279 960 aa2.03□□□□□ -2.08
RTT101YJL047C HPF1Q05164 967 aa2.03□□□□□ -2.08
RTT101YJL047C RTT109Q07794 436 aa2.03□□□□□ -2.08
RTT101YJL047C YOL159CQ08300 171 aa2.03□□□□□ -2.08
RTT101YJL047C VTS1Q08831 523 aaKnown RBP RIP-Chip data2.03□□□□□ -2.08not detected
RTT101YJL047C YOL107WQ12239 342 aa2.03□□□□□ -2.08
RTT101YJL047C TAF3Q12297 353 aa2.03□□□□□ -2.08
RTT101YJL047C NBL1Q3E7Y6 73 aa2.03□□□□□ -2.08
RTT101YJL047C YIL002W-AQ3E7Z5 69 aa2.03□□□□□ -2.08
RTT101YJL047C MF(ALPHA)1P01149 165 aa2.02□□□□□ -2.09
RTT101YJL047C CDC37P06101 506 aaKnown RBP2.02□□□□□ -2.09
RTT101YJL047C SPO7P18410 259 aa2.02□□□□□ -2.09
RTT101YJL047C VPS3P23643 1011 aa2.02□□□□□ -2.09
RTT101YJL047C FEN2P25621 512 aaKnown RBP2.02□□□□□ -2.09
RTT101YJL047C MSS1P32559 526 aaPredicted RBP2.02□□□□□ -2.09
RTT101YJL047C RPC37P36121 282 aa2.02□□□□□ -2.09
RTT101YJL047C ATP3P38077 311 aaKnown RBP2.02□□□□□ -2.09
RTT101YJL047C AGP2P38090 596 aa2.02□□□□□ -2.09
RTT101YJL047C ZTA1P38230 334 aaKnown RBP2.02□□□□□ -2.09
RTT101YJL047C YBR259WP38338 688 aa2.02□□□□□ -2.09
RTT101YJL047C BZZ1P38822 633 aa2.02□□□□□ -2.09
RTT101YJL047C ULP2P40537 1034 aaPredicted RBP2.02□□□□□ -2.09
RTT101YJL047C MND2P40577 368 aa2.02□□□□□ -2.09
RTT101YJL047C STB2P46679 850 aa2.02□□□□□ -2.09
RTT101YJL047C TOM22P49334 152 aa2.02□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms