RNA–Protein interactions for RNA: YHR154W

RTT107, Transcript of Protein implicated in Mms22-dependent DNA repair during S phase, yeastyeast

Gene RTT107, Length 3,213 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTT107YHR154W SHE10P53075 577 aa2.11□□□□□ -2.07
RTT107YHR154W PEF1P53238 335 aa2.11□□□□□ -2.07
RTT107YHR154W ARP5P53946 755 aa2.11□□□□□ -2.07
RTT107YHR154W NRG1Q03125 231 aa2.11□□□□□ -2.07
RTT107YHR154W MMR1Q06324 491 aa2.11□□□□□ -2.07
RTT107YHR154W TFC6Q06339 672 aa2.11□□□□□ -2.07
RTT107YHR154W RTC5Q12108 567 aaKnown RBP2.11□□□□□ -2.07
RTT107YHR154W HNM1P19807 563 aa2.1□□□□□ -2.07
RTT107YHR154W CPR2P23285 205 aa2.1□□□□□ -2.07
RTT107YHR154W URK1P27515 501 aa2.1□□□□□ -2.07
RTT107YHR154W PRE4P30657 266 aa2.1□□□□□ -2.07
RTT107YHR154W SIP1P32578 815 aa2.1□□□□□ -2.07
RTT107YHR154W KES1P35844 434 aaKnown RBP2.1□□□□□ -2.07
RTT107YHR154W MRPL40P36534 297 aa2.1□□□□□ -2.07
RTT107YHR154W MMM1P41800 426 aa2.1□□□□□ -2.07
RTT107YHR154W SIP4P46954 829 aa2.1□□□□□ -2.07
RTT107YHR154W PET130P47065 347 aa2.1□□□□□ -2.07
RTT107YHR154W AQR1P53943 586 aa2.1□□□□□ -2.07
RTT107YHR154W MTG1Q03151 367 aaPredicted RBP2.1□□□□□ -2.07
RTT107YHR154W HOT1Q03213 719 aa2.1□□□□□ -2.07
RTT107YHR154W ARX1Q03862 593 aaKnown RBP2.1□□□□□ -2.07
RTT107YHR154W RNH1Q04740 348 aa2.1□□□□□ -2.07
RTT107YHR154W ADY4Q05955 493 aa2.1□□□□□ -2.07
RTT107YHR154W DUS4Q06063 367 aa2.1□□□□□ -2.07
RTT107YHR154W DBP9Q06218 594 aaKnown RBP2.1□□□□□ -2.07
RTT107YHR154W SIL1Q08199 421 aa2.1□□□□□ -2.07
RTT107YHR154W NMD4Q12129 218 aa2.1□□□□□ -2.07
RTT107YHR154W PSY3Q12318 242 aa2.1□□□□□ -2.07
RTT107YHR154W YVC1Q12324 675 aa2.1□□□□□ -2.07
RTT107YHR154W SFA1P32771 386 aa2.1□□□□□ -2.07
RTT107YHR154W HCS1P34243 683 aa2.1□□□□□ -2.07
RTT107YHR154W CDS1P38221 457 aa2.1□□□□□ -2.07
RTT107YHR154W RRT2P38332 387 aa2.1□□□□□ -2.07
RTT107YHR154W MSS4P38994 779 aa2.1□□□□□ -2.07
RTT107YHR154W SLZ1P40167 298 aa2.1□□□□□ -2.07
RTT107YHR154W ALG5P40350 334 aa2.1□□□□□ -2.07
RTT107YHR154W SEC24P40482 926 aaKnown RBP2.1□□□□□ -2.07
RTT107YHR154W YJL107CP42947 387 aa2.1□□□□□ -2.07
RTT107YHR154W FET5P43561 622 aa2.1□□□□□ -2.07
RTT107YHR154W LSC1P53598 329 aaKnown RBP2.1□□□□□ -2.07
RTT107YHR154W YEH1Q07804 573 aa2.1□□□□□ -2.07
RTT107YHR154W SWT1Q12104 458 aa2.1□□□□□ -2.07
RTT107YHR154W CYC7P00045 113 aa2.1□□□□□ -2.07
RTT107YHR154W RPP0P05317 312 aaKnown RBP2.1□□□□□ -2.07
RTT107YHR154W DFR1P07807 211 aaKnown RBP RIP-Chip data2.1□□□□□ -2.07not detected
RTT107YHR154W SPE1P08432 466 aa2.1□□□□□ -2.07
RTT107YHR154W PDA1P16387 420 aaKnown RBP2.1□□□□□ -2.07
RTT107YHR154W IME1P21190 360 aa2.1□□□□□ -2.07
RTT107YHR154W RNR1P21524 888 aaKnown RBP2.1□□□□□ -2.07
RTT107YHR154W YIH1P25637 258 aa2.1□□□□□ -2.07
RTT107YHR154W YME1P32795 747 aa2.1□□□□□ -2.07
RTT107YHR154W MRP4P32902 394 aa2.1□□□□□ -2.07
RTT107YHR154W YBL055CP34220 418 aaPredicted RBP2.1□□□□□ -2.07
RTT107YHR154W YHL017WP38745 532 aa2.1□□□□□ -2.07
RTT107YHR154W CRG1P38892 291 aaRIP-Chip data2.1□□□□□ -2.07 RIP-Chip
RTT107YHR154W YJL193WP39542 402 aa2.1□□□□□ -2.07
RTT107YHR154W FTR1P40088 404 aa2.1□□□□□ -2.07
RTT107YHR154W SDP1P40479 209 aa2.1□□□□□ -2.07
RTT107YHR154W MKT1P40850 830 aaKnown RBP2.1□□□□□ -2.07
RTT107YHR154W HXT14P42833 540 aa2.1□□□□□ -2.07
RTT107YHR154W YFR018CP43599 363 aa2.1□□□□□ -2.07
RTT107YHR154W UBX6P47049 396 aa2.1□□□□□ -2.07
RTT107YHR154W AAD10P47182 288 aa2.1□□□□□ -2.07
RTT107YHR154W INP2Q03824 705 aa2.1□□□□□ -2.07
RTT107YHR154W CTK1Q03957 528 aaKnown RBP2.1□□□□□ -2.07
RTT107YHR154W GTB1Q04924 702 aa2.1□□□□□ -2.07
RTT107YHR154W CDA1Q06702 301 aa2.1□□□□□ -2.07
RTT107YHR154W VAM6Q07468 1049 aa2.1□□□□□ -2.07
RTT107YHR154W POM34Q12445 299 aa2.1□□□□□ -2.07
RTT107YHR154W MRPL23Q12487 163 aaPredicted RBP2.1□□□□□ -2.07
RTT107YHR154W YIL002W-AQ3E7Z5 69 aa2.1□□□□□ -2.07
RTT107YHR154W YPT6Q99260 215 aa2.1□□□□□ -2.07
RTT107YHR154W POX1P13711 748 aa2.09□□□□□ -2.07
RTT107YHR154W EMC1P25574 760 aa2.09□□□□□ -2.07
RTT107YHR154W YUR1P26725 428 aa2.09□□□□□ -2.07
RTT107YHR154W DSS4P32601 143 aa2.09□□□□□ -2.07
RTT107YHR154W YBR259WP38338 688 aa2.09□□□□□ -2.07
RTT107YHR154W ROK1P45818 564 aaPredicted RBP2.09□□□□□ -2.07
RTT107YHR154W BIT61P47041 543 aa2.09□□□□□ -2.07
RTT107YHR154W LIA1P47120 325 aaKnown RBP2.09□□□□□ -2.07
RTT107YHR154W YGL138CP53122 345 aa2.09□□□□□ -2.07
RTT107YHR154W CAF130P53280 1122 aaPredicted RBP2.09□□□□□ -2.07
RTT107YHR154W SOL4P53315 255 aa2.09□□□□□ -2.07
RTT107YHR154W NCE103P53615 221 aa2.09□□□□□ -2.07
RTT107YHR154W CSL4P53859 292 aaPredicted RBP2.09□□□□□ -2.07
RTT107YHR154W NGL2Q03264 515 aaKnown RBP2.09□□□□□ -2.07
RTT107YHR154W ECM22Q05958 814 aaPredicted RBP2.09□□□□□ -2.07
RTT107YHR154W NOP6Q07623 225 aaKnown RBP2.09□□□□□ -2.07
RTT107YHR154W CLP1Q08685 445 aaPredicted RBP2.09□□□□□ -2.07
RTT107YHR154W AVL9Q12500 764 aa2.09□□□□□ -2.07
RTT107YHR154W TFB5Q3E7C1 72 aaPredicted RBP2.09□□□□□ -2.07
RTT107YHR154W YLR415CO13578 112 aa2.09□□□□□ -2.08
RTT107YHR154W MSS116P15424 664 aaKnown RBP2.09□□□□□ -2.08
RTT107YHR154W KAR3P17119 729 aa2.09□□□□□ -2.08
RTT107YHR154W ERG6P25087 383 aaKnown RBP2.09□□□□□ -2.08
RTT107YHR154W RAD51P25454 400 aa2.09□□□□□ -2.08
RTT107YHR154W FUB1P25659 250 aa2.09□□□□□ -2.08
RTT107YHR154W PPZ1P26570 692 aa2.09□□□□□ -2.08
RTT107YHR154W URA7P28274 579 aaKnown RBP2.09□□□□□ -2.08
RTT107YHR154W YEL043WP32618 956 aa2.09□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 43.5 ms