RNA–Protein interactions for RNA: YFL040W

YFL040W, Transcript of Putative transporter, yeast

Gene YFL040W, Length 1,623 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YFL040W	YFL040W	SKG3	Q06315	1026 aa		4.19	□□□□□ -1.74
YFL040W	YFL040W	YPL272C	Q08984	517 aa		4.19	□□□□□ -1.74
YFL040W	YFL040W	SMC6	Q12749	1114 aa		4.19	□□□□□ -1.74
YFL040W	YFL040W	ARO1	P08566	1588 aa	Known RBP	4.19	□□□□□ -1.74
YFL040W	YFL040W	PET111	P08468	800 aa		4.18	□□□□□ -1.74
YFL040W	YFL040W	MRP2	P10663	115 aa	Predicted RBP	4.18	□□□□□ -1.74
YFL040W	YFL040W	AUR1	P36107	401 aa	Predicted RBP	4.18	□□□□□ -1.74
YFL040W	YFL040W	SRP72	P38688	640 aa	Known RBP	4.18	□□□□□ -1.74
YFL040W	YFL040W	CCT6	P39079	546 aa		4.18	□□□□□ -1.74
YFL040W	YFL040W	SGN1	P40561	250 aa	Known RBP RIP-Chip data	4.18	□□□□□ -1.74	not detected
YFL040W	YFL040W	BNA3	P47039	444 aa	Known RBP	4.18	□□□□□ -1.74
YFL040W	YFL040W	YML6	P51998	286 aa		4.18	□□□□□ -1.74
YFL040W	YFL040W	YLR345W	Q06137	509 aa		4.18	□□□□□ -1.74
YFL040W	YFL040W	PDR8	Q06149	701 aa		4.18	□□□□□ -1.74
YFL040W	YFL040W	PFA4	Q12006	378 aa		4.18	□□□□□ -1.74
YFL040W	YFL040W	STH1	P32597	1359 aa		4.18	□□□□□ -1.74
YFL040W	YFL040W	PEX5	P35056	612 aa		4.17	□□□□□ -1.74
YFL040W	YFL040W	OCT1	P35999	772 aa		4.17	□□□□□ -1.74
YFL040W	YFL040W	YPT53	P36019	220 aa		4.17	□□□□□ -1.74
YFL040W	YFL040W	LRP1	P38801	184 aa	Known RBP	4.17	□□□□□ -1.74
YFL040W	YFL040W	APE4	P38821	490 aa		4.17	□□□□□ -1.74
YFL040W	YFL040W	MET18	P40469	1032 aa		4.17	□□□□□ -1.74
YFL040W	YFL040W	ZDS2	P54786	942 aa		4.17	□□□□□ -1.74
YFL040W	YFL040W	YML037C	Q03703	340 aa		4.17	□□□□□ -1.74
YFL040W	YFL040W	SFI1	Q12369	946 aa		4.17	□□□□□ -1.74
YFL040W	YFL040W	YBR085C-A	O43137	85 aa		4.17	□□□□□ -1.74
YFL040W	YFL040W	GAL4	P04386	881 aa		4.17	□□□□□ -1.74
YFL040W	YFL040W	REG2	P38232	338 aa		4.17	□□□□□ -1.74
YFL040W	YFL040W	ECM10	P39987	644 aa		4.17	□□□□□ -1.74
YFL040W	YFL040W	PSA1	P41940	361 aa	Known RBP	4.17	□□□□□ -1.74
YFL040W	YFL040W	RPN11	P43588	306 aa	Known RBP	4.17	□□□□□ -1.74
YFL040W	YFL040W	COP1	P53622	1201 aa	Known RBP	4.17	□□□□□ -1.74
YFL040W	YFL040W	JJJ1	P53863	590 aa		4.17	□□□□□ -1.74
YFL040W	YFL040W	ERO1	Q03103	563 aa		4.17	□□□□□ -1.74
YFL040W	YFL040W	RPC11	Q04307	110 aa	Predicted RBP	4.17	□□□□□ -1.74
YFL040W	YFL040W	YLR455W	Q06188	304 aa		4.17	□□□□□ -1.74
YFL040W	YFL040W	YEH1	Q07804	573 aa		4.17	□□□□□ -1.74
YFL040W	YFL040W	MCH4	Q08268	501 aa		4.17	□□□□□ -1.74
YFL040W	YFL040W	BUD7	Q08754	746 aa		4.17	□□□□□ -1.74
YFL040W	YFL040W	TCO89	Q08921	799 aa		4.17	□□□□□ -1.74
YFL040W	YFL040W	CRC1	Q12289	327 aa		4.17	□□□□□ -1.74
YFL040W	YFL040W	YPT6	Q99260	215 aa		4.17	□□□□□ -1.74
YFL040W	YFL040W	BUD3	P25558	1636 aa		4.16	□□□□□ -1.74
YFL040W	YFL040W	YAP1	P19880	650 aa	Known RBP	4.16	□□□□□ -1.74
YFL040W	YFL040W	PTP1	P25044	335 aa		4.16	□□□□□ -1.74
YFL040W	YFL040W	GPI10	P30777	616 aa		4.16	□□□□□ -1.74
YFL040W	YFL040W	DBF4	P32325	704 aa		4.16	□□□□□ -1.74
YFL040W	YFL040W	MNN2	P38069	597 aa		4.16	□□□□□ -1.74
YFL040W	YFL040W	YIL024C	P40543	189 aa		4.16	□□□□□ -1.74
YFL040W	YFL040W	DOT5	P40553	215 aa		4.16	□□□□□ -1.74
YFL040W	YFL040W	MET28	P40573	187 aa		4.16	□□□□□ -1.74
YFL040W	YFL040W	CTK2	P46962	323 aa		4.16	□□□□□ -1.74
YFL040W	YFL040W	INA17	Q02888	182 aa		4.16	□□□□□ -1.74
YFL040W	YFL040W	PIG1	Q06216	648 aa		4.16	□□□□□ -1.74
YFL040W	YFL040W	YLR049C	Q12110	428 aa		4.16	□□□□□ -1.74
YFL040W	YFL040W	YJR112W-A	Q3E743	109 aa		4.16	□□□□□ -1.74
YFL040W	YFL040W	CHC1	P22137	1653 aa	Known RBP	4.16	□□□□□ -1.74
YFL040W	YFL040W	YER145C-A	A0A023PYF4	145 aa		4.15	□□□□□ -1.74
YFL040W	YFL040W	HSP82	P02829	709 aa	Known RBP	4.15	□□□□□ -1.74
YFL040W	YFL040W	GPA1	P08539	472 aa		4.15	□□□□□ -1.74
YFL040W	YFL040W	NAT1	P12945	854 aa	Known RBP	4.15	□□□□□ -1.74
YFL040W	YFL040W	PWP1	P21304	576 aa	Known RBP	4.15	□□□□□ -1.74
YFL040W	YFL040W	SAS3	P34218	831 aa		4.15	□□□□□ -1.74
YFL040W	YFL040W	SMF1	P38925	575 aa		4.15	□□□□□ -1.74
YFL040W	YFL040W	YJL068C	P40363	299 aa		4.15	□□□□□ -1.74
YFL040W	YFL040W	CFD1	P40558	293 aa		4.15	□□□□□ -1.74
YFL040W	YFL040W	NET1	P47035	1189 aa		4.15	□□□□□ -1.74
YFL040W	YFL040W	ARD1	P07347	238 aa	Predicted RBP	4.14	□□□□□ -1.75
YFL040W	YFL040W	CHO1	P08456	276 aa		4.14	□□□□□ -1.75
YFL040W	YFL040W	CNA1	P23287	553 aa		4.14	□□□□□ -1.75
YFL040W	YFL040W	ADK2	P26364	225 aa		4.14	□□□□□ -1.75
YFL040W	YFL040W	PDB1	P32473	366 aa	Known RBP	4.14	□□□□□ -1.75
YFL040W	YFL040W	MAF1	P41910	395 aa		4.14	□□□□□ -1.75
YFL040W	YFL040W	YFR020W	P43600	232 aa		4.14	□□□□□ -1.75
YFL040W	YFL040W	ROK1	P45818	564 aa	Predicted RBP	4.14	□□□□□ -1.75
YFL040W	YFL040W	RPS7B	P48164	190 aa	Known RBP	4.14	□□□□□ -1.75
YFL040W	YFL040W	SGF73	P53165	657 aa		4.14	□□□□□ -1.75
YFL040W	YFL040W	IST1	P53843	298 aa	Predicted RBP	4.14	□□□□□ -1.75
YFL040W	YFL040W	PFA5	Q03289	374 aa		4.14	□□□□□ -1.75
YFL040W	YFL040W	RCF1	Q03713	159 aa		4.14	□□□□□ -1.75
YFL040W	YFL040W	ECM22	Q05958	814 aa	Predicted RBP	4.14	□□□□□ -1.75
YFL040W	YFL040W	PSR1	Q07800	427 aa		4.14	□□□□□ -1.75
YFL040W	YFL040W	RRI1	Q12468	440 aa		4.14	□□□□□ -1.75
YFL040W	YFL040W	TKL1	P23254	680 aa	Known RBP	4.13	□□□□□ -1.75
YFL040W	YFL040W	CDC60	P26637	1090 aa	Known RBP	4.13	□□□□□ -1.75
YFL040W	YFL040W	UBP11	P36026	717 aa		4.13	□□□□□ -1.75
YFL040W	YFL040W	FLO5	P38894	1075 aa		4.13	□□□□□ -1.75
YFL040W	YFL040W	VPS41	P38959	992 aa		4.13	□□□□□ -1.75
YFL040W	YFL040W	EAF7	P53911	425 aa	Known RBP	4.13	□□□□□ -1.75
YFL040W	YFL040W	MAK10	Q02197	733 aa		4.13	□□□□□ -1.75
YFL040W	YFL040W	RMT2	Q03305	412 aa		4.13	□□□□□ -1.75
YFL040W	YFL040W	FRE3	Q08905	711 aa		4.13	□□□□□ -1.75
YFL040W	YFL040W	MLP2	P40457	1679 aa		4.13	□□□□□ -1.75
YFL040W	YFL040W	HXK2	P04807	486 aa	Known RBP	4.13	□□□□□ -1.75
YFL040W	YFL040W	DPH2	P32461	534 aa		4.13	□□□□□ -1.75
YFL040W	YFL040W	STB6	P36085	766 aa		4.13	□□□□□ -1.75
YFL040W	YFL040W	PXL1	P36166	706 aa		4.13	□□□□□ -1.75
YFL040W	YFL040W	YAP3	P38749	330 aa		4.13	□□□□□ -1.75
YFL040W	YFL040W	DPB11	P47027	764 aa	Predicted RBP	4.13	□□□□□ -1.75
YFL040W	YFL040W	UBP8	P50102	471 aa		4.13	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 22.1 ms