RNA–Protein interactions for RNA: YER088C

DOT6, Transcript of Protein involved in rRNA and ribosome biogenesis, yeast

Gene DOT6, Length 2,013 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DOT6	YER088C	SNU114	P36048	1008 aa	Known RBP	2.17	□□□□□ -2.06
DOT6	YER088C	UIP3	P39547	235 aa		2.17	□□□□□ -2.06
DOT6	YER088C	DPB11	P47027	764 aa	Predicted RBP	2.17	□□□□□ -2.06
DOT6	YER088C	IST1	P53843	298 aa	Predicted RBP	2.17	□□□□□ -2.06
DOT6	YER088C	ESBP6	P53918	673 aa		2.17	□□□□□ -2.06
DOT6	YER088C	FCP1	Q03254	732 aa		2.17	□□□□□ -2.06
DOT6	YER088C	ADE13	Q05911	482 aa	Known RBP	2.17	□□□□□ -2.06
DOT6	YER088C	VIP1	Q06685	1146 aa	Known RBP	2.17	□□□□□ -2.06
DOT6	YER088C	OPY2	Q06810	360 aa		2.17	□□□□□ -2.06
DOT6	YER088C	RIX7	Q07844	837 aa	Known RBP	2.17	□□□□□ -2.06
DOT6	YER088C	APL5	Q08951	932 aa	Known RBP	2.17	□□□□□ -2.06
DOT6	YER088C	NUS1	Q12063	375 aa		2.17	□□□□□ -2.06
DOT6	YER088C	YIL177C	P40434	1758 aa		2.17	□□□□□ -2.06
DOT6	YER088C	YJL225C	P40889	1758 aa		2.17	□□□□□ -2.06
DOT6	YER088C	POM152	P39685	1337 aa		2.17	□□□□□ -2.06
DOT6	YER088C	YLL066C	Q99208	1374 aa		2.17	□□□□□ -2.06
DOT6	YER088C	YBR085C-A	O43137	85 aa		2.17	□□□□□ -2.06
DOT6	YER088C	PWP1	P21304	576 aa	Known RBP	2.17	□□□□□ -2.06
DOT6	YER088C	PGS1	P25578	521 aa		2.17	□□□□□ -2.06
DOT6	YER088C	DPB3	P27344	201 aa		2.17	□□□□□ -2.06
DOT6	YER088C	SSH4	P32343	579 aa		2.17	□□□□□ -2.06
DOT6	YER088C	PDB1	P32473	366 aa	Known RBP	2.17	□□□□□ -2.06
DOT6	YER088C	MIA40	P36046	403 aa		2.17	□□□□□ -2.06
DOT6	YER088C	ARC40	P38328	384 aa	Known RBP	2.17	□□□□□ -2.06
DOT6	YER088C	YNG2	P38806	282 aa	Known RBP	2.17	□□□□□ -2.06
DOT6	YER088C	YJR061W	P40355	935 aa		2.17	□□□□□ -2.06
DOT6	YER088C	ARC1	P46672	376 aa	Known RBP	2.17	□□□□□ -2.06
DOT6	YER088C	VPS25	P47142	202 aa		2.17	□□□□□ -2.06
DOT6	YER088C	PKP2	P53170	491 aa		2.17	□□□□□ -2.06
DOT6	YER088C	YSA1	Q01976	231 aa		2.17	□□□□□ -2.06
DOT6	YER088C	IZH1	Q03419	316 aa		2.17	□□□□□ -2.06
DOT6	YER088C	YMR034C	Q05131	434 aa	Predicted RBP	2.17	□□□□□ -2.06
DOT6	YER088C	SKG3	Q06315	1026 aa		2.17	□□□□□ -2.06
DOT6	YER088C	ENT4	Q07872	247 aa		2.17	□□□□□ -2.06
DOT6	YER088C	SLM3	Q12093	417 aa		2.17	□□□□□ -2.06
DOT6	YER088C	MHP1	P43638	1398 aa		2.16	□□□□□ -2.06
DOT6	YER088C	HXK2	P04807	486 aa	Known RBP	2.16	□□□□□ -2.06
DOT6	YER088C	DIA4	P38705	446 aa	Predicted RBP	2.16	□□□□□ -2.06
DOT6	YER088C	VID27	P40157	782 aa		2.16	□□□□□ -2.06
DOT6	YER088C	YIL060W	P40519	144 aa		2.16	□□□□□ -2.06
DOT6	YER088C	YIR016W	P40572	265 aa		2.16	□□□□□ -2.06
DOT6	YER088C	TES1	P41903	349 aa	Known RBP	2.16	□□□□□ -2.06
DOT6	YER088C	RPS10B	P46784	105 aa	Known RBP	2.16	□□□□□ -2.06
DOT6	YER088C	SGF73	P53165	657 aa		2.16	□□□□□ -2.06
DOT6	YER088C	YMR178W	Q03219	274 aa	Known RBP	2.16	□□□□□ -2.06
DOT6	YER088C	TDA9	Q04545	1251 aa		2.16	□□□□□ -2.06
DOT6	YER088C	DSE3	Q08729	430 aa		2.16	□□□□□ -2.06
DOT6	YER088C	INP53	Q12271	1107 aa		2.16	□□□□□ -2.06
DOT6	YER088C	YLR419W	Q06698	1435 aa	Known RBP	2.16	□□□□□ -2.06
DOT6	YER088C	CBP1	P07252	654 aa		2.15	□□□□□ -2.06
DOT6	YER088C	CDC15	P27636	974 aa		2.15	□□□□□ -2.06
DOT6	YER088C	GAC1	P28006	793 aa		2.15	□□□□□ -2.06
DOT6	YER088C	SYN8	P31377	255 aa		2.15	□□□□□ -2.06
DOT6	YER088C	MUD2	P36084	527 aa	Known RBP	2.15	□□□□□ -2.06
DOT6	YER088C	SCO2	P38072	301 aa		2.15	□□□□□ -2.06
DOT6	YER088C	PHO90	P39535	881 aa		2.15	□□□□□ -2.06
DOT6	YER088C	EAF6	P47128	113 aa		2.15	□□□□□ -2.06
DOT6	YER088C	UPF3	P48412	387 aa	Known RBP	2.15	□□□□□ -2.06
DOT6	YER088C	STR3	P53101	465 aa	Known RBP	2.15	□□□□□ -2.06
DOT6	YER088C	BSC5	P53755	489 aa		2.15	□□□□□ -2.06
DOT6	YER088C	BOP3	P53958	396 aa		2.15	□□□□□ -2.06
DOT6	YER088C	RAD30	Q04049	632 aa		2.15	□□□□□ -2.06
DOT6	YER088C	ARP10	Q04549	284 aa		2.15	□□□□□ -2.06
DOT6	YER088C	ATG26	Q06321	1198 aa		2.15	□□□□□ -2.06
DOT6	YER088C	SNA4	Q07549	140 aa		2.15	□□□□□ -2.06
DOT6	YER088C	RPS10A	Q08745	105 aa	Predicted RBP	2.15	□□□□□ -2.06
DOT6	YER088C	NBP2	Q12163	236 aa		2.15	□□□□□ -2.06
DOT6	YER088C	IKI3	Q06706	1349 aa	Known RBP	2.15	□□□□□ -2.07
DOT6	YER088C	RFC1	P38630	861 aa	Known RBP	2.15	□□□□□ -2.07
DOT6	YER088C	UBA4	P38820	440 aa		2.15	□□□□□ -2.07
DOT6	YER088C	YND1	P40009	630 aa		2.15	□□□□□ -2.07
DOT6	YER088C	FET5	P43561	622 aa		2.15	□□□□□ -2.07
DOT6	YER088C	BET4	Q00618	327 aa		2.15	□□□□□ -2.07
DOT6	YER088C	NUP100	Q02629	959 aa		2.15	□□□□□ -2.07
DOT6	YER088C	EKI1	Q03764	534 aa		2.15	□□□□□ -2.07
DOT6	YER088C	NUP53	Q03790	475 aa		2.15	□□□□□ -2.07
DOT6	YER088C	YMR254C	Q04838	102 aa		2.15	□□□□□ -2.07
DOT6	YER088C	ECI1	Q05871	280 aa		2.15	□□□□□ -2.07
DOT6	YER088C	SPE4	Q12455	300 aa		2.15	□□□□□ -2.07
DOT6	YER088C	YRF1-4	O13559	1382 aa		2.14	□□□□□ -2.07
DOT6	YER088C	CDC16	P09798	840 aa		2.14	□□□□□ -2.07
DOT6	YER088C	TSC10	P38342	320 aa		2.14	□□□□□ -2.07
DOT6	YER088C	ELO1	P39540	310 aa		2.14	□□□□□ -2.07
DOT6	YER088C	SMC3	P47037	1230 aa		2.14	□□□□□ -2.07
DOT6	YER088C	PYK2	P52489	506 aa	Known RBP	2.14	□□□□□ -2.07
DOT6	YER088C	DIG1	Q03063	452 aa	Known RBP	2.14	□□□□□ -2.07
DOT6	YER088C	TMA64	Q04600	565 aa	Known RBP	2.14	□□□□□ -2.07
DOT6	YER088C	UTP21	Q06078	939 aa	Predicted RBP	2.14	□□□□□ -2.07
DOT6	YER088C	BUD7	Q08754	746 aa		2.14	□□□□□ -2.07
DOT6	YER088C	YDR056C	Q12025	205 aa		2.14	□□□□□ -2.07
DOT6	YER088C	NKP1	Q12493	238 aa		2.14	□□□□□ -2.07
DOT6	YER088C	CDC24	P11433	854 aa	Predicted RBP	2.13	□□□□□ -2.07
DOT6	YER088C	CDC23	P16522	626 aa		2.13	□□□□□ -2.07
DOT6	YER088C	KGD1	P20967	1014 aa	Known RBP	2.13	□□□□□ -2.07
DOT6	YER088C	CHS3	P29465	1165 aa		2.13	□□□□□ -2.07
DOT6	YER088C	YPK3	P38070	525 aa		2.13	□□□□□ -2.07
DOT6	YER088C	ANS1	P38832	159 aa		2.13	□□□□□ -2.07
DOT6	YER088C	MET30	P39014	640 aa		2.13	□□□□□ -2.07
DOT6	YER088C	SGM1	P47166	707 aa		2.13	□□□□□ -2.07
DOT6	YER088C	RPS7B	P48164	190 aa	Known RBP	2.13	□□□□□ -2.07

Retrieved 100 of 5,963 RNA–protein pairs in 18.9 ms