RNA–Protein interactions for RNA: YDR288W

NSE3, Transcript of Component of the SMC5-SMC6 complex, yeast

Gene NSE3, Length 912 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NSE3	YDR288W	CDC45	Q08032	650 aa		4.74	□□□□□ -1.65
NSE3	YDR288W	YJR112W-A	Q3E743	109 aa		4.74	□□□□□ -1.65
NSE3	YDR288W	SNF3	P10870	884 aa		4.73	□□□□□ -1.65
NSE3	YDR288W	KGD1	P20967	1014 aa	Known RBP	4.73	□□□□□ -1.65
NSE3	YDR288W	OCA4	P25366	362 aa		4.73	□□□□□ -1.65
NSE3	YDR288W	PUP3	P25451	205 aa	Known RBP	4.73	□□□□□ -1.65
NSE3	YDR288W	YBL055C	P34220	418 aa	Predicted RBP	4.73	□□□□□ -1.65
NSE3	YDR288W	YKL100C	P34248	587 aa		4.73	□□□□□ -1.65
NSE3	YDR288W	DOT5	P40553	215 aa		4.73	□□□□□ -1.65
NSE3	YDR288W	HXT9	P40885	567 aa		4.73	□□□□□ -1.65
NSE3	YDR288W	ARE2	P53629	642 aa	Known RBP	4.73	□□□□□ -1.65
NSE3	YDR288W	TIM10	P87108	93 aa		4.73	□□□□□ -1.65
NSE3	YDR288W	TDA9	Q04545	1251 aa		4.73	□□□□□ -1.65
NSE3	YDR288W	SDH5	Q08230	162 aa		4.73	□□□□□ -1.65
NSE3	YDR288W	ETT1	Q08421	412 aa	Known RBP	4.73	□□□□□ -1.65
NSE3	YDR288W	GEP3	Q08622	556 aa		4.73	□□□□□ -1.65
NSE3	YDR288W	BUD7	Q08754	746 aa		4.73	□□□□□ -1.65
NSE3	YDR288W	YCP4	P25349	247 aa	Known RBP	4.72	□□□□□ -1.65
NSE3	YDR288W	PDR3	P33200	976 aa		4.72	□□□□□ -1.65
NSE3	YDR288W	RPL32	P38061	130 aa	Known RBP	4.72	□□□□□ -1.65
NSE3	YDR288W	ESL1	P40456	1118 aa		4.72	□□□□□ -1.65
NSE3	YDR288W	DUG3	P53871	357 aa		4.72	□□□□□ -1.65
NSE3	YDR288W	YVH1	Q02256	364 aa	Known RBP	4.72	□□□□□ -1.65
NSE3	YDR288W	ADE13	Q05911	482 aa	Known RBP	4.72	□□□□□ -1.65
NSE3	YDR288W	VPS38	Q05919	439 aa		4.72	□□□□□ -1.65
NSE3	YDR288W	DSE3	Q08729	430 aa		4.72	□□□□□ -1.65
NSE3	YDR288W	YPL272C	Q08984	517 aa		4.72	□□□□□ -1.65
NSE3	YDR288W	SGS1	P35187	1447 aa		4.72	□□□□□ -1.65
NSE3	YDR288W	PUT2	P07275	575 aa		4.71	□□□□□ -1.66
NSE3	YDR288W	PDA1	P16387	420 aa	Known RBP	4.71	□□□□□ -1.66
NSE3	YDR288W	BUD5	P25300	642 aa	Predicted RBP	4.71	□□□□□ -1.66
NSE3	YDR288W	NPR2	P39923	615 aa		4.71	□□□□□ -1.66
NSE3	YDR288W	IAH1	P41734	238 aa		4.71	□□□□□ -1.66
NSE3	YDR288W	SNA4	Q07549	140 aa		4.71	□□□□□ -1.66
NSE3	YDR288W	FOB1	O13329	566 aa		4.7	□□□□□ -1.66
NSE3	YDR288W	ARG3	P05150	338 aa		4.7	□□□□□ -1.66
NSE3	YDR288W	DFR1	P07807	211 aa	Known RBP RIP-Chip data	4.7	□□□□□ -1.66	not detected
NSE3	YDR288W	ART10	P18634	518 aa	Known RBP	4.7	□□□□□ -1.66
NSE3	YDR288W	SUI2	P20459	304 aa	Known RBP	4.7	□□□□□ -1.66
NSE3	YDR288W	SYN8	P31377	255 aa		4.7	□□□□□ -1.66
NSE3	YDR288W	NUP133	P36161	1157 aa		4.7	□□□□□ -1.66
NSE3	YDR288W	YPK3	P38070	525 aa		4.7	□□□□□ -1.66
NSE3	YDR288W	SRO77	P38163	1010 aa		4.7	□□□□□ -1.66
NSE3	YDR288W	UBA4	P38820	440 aa		4.7	□□□□□ -1.66
NSE3	YDR288W	NOC2	P39744	710 aa	Known RBP	4.7	□□□□□ -1.66
NSE3	YDR288W	PCL6	P40038	420 aa		4.7	□□□□□ -1.66
NSE3	YDR288W	SPO22	P40511	975 aa		4.7	□□□□□ -1.66
NSE3	YDR288W	RPS10B	P46784	105 aa	Known RBP	4.7	□□□□□ -1.66
NSE3	YDR288W	IMD4	P50094	524 aa	Known RBP	4.7	□□□□□ -1.66
NSE3	YDR288W	SOL4	P53315	255 aa		4.7	□□□□□ -1.66
NSE3	YDR288W	MRPL19	P53875	158 aa		4.7	□□□□□ -1.66
NSE3	YDR288W	ESBP6	P53918	673 aa		4.7	□□□□□ -1.66
NSE3	YDR288W	EKI1	Q03764	534 aa		4.7	□□□□□ -1.66
NSE3	YDR288W	YMR160W	Q03823	816 aa		4.7	□□□□□ -1.66
NSE3	YDR288W	YDR415C	Q04033	374 aa	Predicted RBP	4.7	□□□□□ -1.66
NSE3	YDR288W	RPS10A	Q08745	105 aa	Predicted RBP	4.7	□□□□□ -1.66
NSE3	YDR288W	AVL9	Q12500	764 aa		4.7	□□□□□ -1.66
NSE3	YDR288W	GAL80	P04387	435 aa		4.69	□□□□□ -1.66
NSE3	YDR288W	MRP13	P12686	339 aa		4.69	□□□□□ -1.66
NSE3	YDR288W	ATO2	P32907	282 aa		4.69	□□□□□ -1.66
NSE3	YDR288W	LEU5	P38702	357 aa		4.69	□□□□□ -1.66
NSE3	YDR288W	CCT6	P39079	546 aa		4.69	□□□□□ -1.66
NSE3	YDR288W	CIN4	P39110	191 aa		4.69	□□□□□ -1.66
NSE3	YDR288W	PHO90	P39535	881 aa		4.69	□□□□□ -1.66
NSE3	YDR288W	YGR126W	P53274	230 aa		4.69	□□□□□ -1.66
NSE3	YDR288W	MPS1	P54199	764 aa		4.69	□□□□□ -1.66
NSE3	YDR288W	YDR239C	Q03780	787 aa		4.69	□□□□□ -1.66
NSE3	YDR288W	YMR034C	Q05131	434 aa	Predicted RBP	4.69	□□□□□ -1.66
NSE3	YDR288W	SSK1	Q07084	712 aa		4.69	□□□□□ -1.66
NSE3	YDR288W	ICT1	Q12385	394 aa		4.69	□□□□□ -1.66
NSE3	YDR288W	CDC31	P06704	161 aa	Known RBP	4.68	□□□□□ -1.66
NSE3	YDR288W	MCM4	P30665	933 aa	Known RBP	4.68	□□□□□ -1.66
NSE3	YDR288W	TIF3	P34167	436 aa	Known RBP	4.68	□□□□□ -1.66
NSE3	YDR288W	TCD2	P36101	447 aa	Known RBP	4.68	□□□□□ -1.66
NSE3	YDR288W	SGN1	P40561	250 aa	Known RBP RIP-Chip data	4.68	□□□□□ -1.66	not detected
NSE3	YDR288W	SRB7	P47822	140 aa		4.68	□□□□□ -1.66
NSE3	YDR288W	APT1	P49435	187 aa	Known RBP	4.68	□□□□□ -1.66
NSE3	YDR288W	HOS2	P53096	452 aa	Predicted RBP	4.68	□□□□□ -1.66
NSE3	YDR288W	SMM1	P53720	384 aa	Known RBP	4.68	□□□□□ -1.66
NSE3	YDR288W	RTT109	Q07794	436 aa		4.68	□□□□□ -1.66
NSE3	YDR288W	MLH2	Q07980	695 aa		4.68	□□□□□ -1.66
NSE3	YDR288W	YAP7	Q08182	245 aa		4.68	□□□□□ -1.66
NSE3	YDR288W	GID7	P25569	745 aa		4.67	□□□□□ -1.66
NSE3	YDR288W	TMT1	P32643	299 aa		4.67	□□□□□ -1.66
NSE3	YDR288W	YME1	P32795	747 aa		4.67	□□□□□ -1.66
NSE3	YDR288W	ARP1	P38696	384 aa		4.67	□□□□□ -1.66
NSE3	YDR288W	LAG1	P38703	411 aa		4.67	□□□□□ -1.66
NSE3	YDR288W	UTP9	P38882	575 aa	Known RBP	4.67	□□□□□ -1.66
NSE3	YDR288W	RTS2	P40962	232 aa		4.67	□□□□□ -1.66
NSE3	YDR288W	SNG1	P46950	547 aa		4.67	□□□□□ -1.66
NSE3	YDR288W	PKP2	P53170	491 aa		4.67	□□□□□ -1.66
NSE3	YDR288W	YDL057W	Q07379	328 aa		4.67	□□□□□ -1.66
NSE3	YDR288W	RLM1	Q12224	676 aa		4.67	□□□□□ -1.66
NSE3	YDR288W	CKA1	P15790	372 aa		4.66	□□□□□ -1.66
NSE3	YDR288W	MGR1	P25573	417 aa		4.66	□□□□□ -1.66
NSE3	YDR288W	PAP1	P29468	568 aa	Known RBP	4.66	□□□□□ -1.66
NSE3	YDR288W	SNC1	P31109	117 aa		4.66	□□□□□ -1.66
NSE3	YDR288W	MTR2	P34232	184 aa	Known RBP	4.66	□□□□□ -1.66
NSE3	YDR288W	YKL023W	P36103	277 aa	Known RBP	4.66	□□□□□ -1.66
NSE3	YDR288W	CST26	P38226	397 aa		4.66	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 61.4 ms