RNA–Protein interactions for RNA: ENST00000598717.5

LTBP4-223, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 5

Gene LTBP4, Length 811 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-223ENST00000598717 XBP1P17861 261 aa22.28■■□□□ 1.16
LTBP4-223ENST00000598717 TRAF1Q13077 416 aa22.28■■□□□ 1.16
LTBP4-223ENST00000598717 PKN1Q16512 942 aa22.28■■□□□ 1.16
LTBP4-223ENST00000598717 CCDC174Q6PII3 467 aa22.28■■□□□ 1.16
LTBP4-223ENST00000598717 REM2Q8IYK8 340 aaPredicted RBP22.28■■□□□ 1.16
LTBP4-223ENST00000598717 SLC38A10Q9HBR0 1119 aa22.28■■□□□ 1.16
LTBP4-223ENST00000598717 WDR33Q9C0J8 1336 aaKnown RBP22.28■■□□□ 1.16
LTBP4-223ENST00000598717 HERVK_113P62684 666 aa22.27■■□□□ 1.16
LTBP4-223ENST00000598717 HTRA3P83110 453 aa22.27■■□□□ 1.16
LTBP4-223ENST00000598717 HEATR3Q7Z4Q2 680 aa22.27■■□□□ 1.16
LTBP4-223ENST00000598717 FBXO11Q86XK2 927 aa22.27■■□□□ 1.16
LTBP4-223ENST00000598717 MB21D1Q8N884 522 aa22.27■■□□□ 1.16
LTBP4-223ENST00000598717 SMCR8Q8TEV9 937 aaPredicted RBP22.27■■□□□ 1.16
LTBP4-223ENST00000598717 PARK7Q99497 189 aaKnown RBP22.27■■□□□ 1.16
LTBP4-223ENST00000598717 AMNQ9BXJ7 453 aa22.27■■□□□ 1.16
LTBP4-223ENST00000598717 ZCCHC17Q9NP64 241 aaKnown RBP22.27■■□□□ 1.16
LTBP4-223ENST00000598717 PNMA2Q9UL42 364 aa22.27■■□□□ 1.16
LTBP4-223ENST00000598717 ADAMTS5Q9UNA0 930 aa22.27■■□□□ 1.16
LTBP4-223ENST00000598717 hCG_1984214I3L0E3 225 aa22.26■■□□□ 1.15
LTBP4-223ENST00000598717 AOC2O75106 756 aa22.26■■□□□ 1.15
LTBP4-223ENST00000598717 CYP2C8P10632 490 aa22.26■■□□□ 1.15
LTBP4-223ENST00000598717 HSPA6P17066 643 aa22.26■■□□□ 1.15
LTBP4-223ENST00000598717 PDCP20941 246 aa22.26■■□□□ 1.15
LTBP4-223ENST00000598717 TM4SF4P48230 202 aa22.26■■□□□ 1.15
LTBP4-223ENST00000598717 TRIM29Q14134 588 aa22.26■■□□□ 1.15
LTBP4-223ENST00000598717 LARP1BQ659C4 914 aaKnown RBP22.26■■□□□ 1.15
LTBP4-223ENST00000598717 IFNL1Q8IU54 200 aa22.26■■□□□ 1.15
LTBP4-223ENST00000598717 ZNF713Q8N859 430 aaPredicted RBP22.26■■□□□ 1.15
LTBP4-223ENST00000598717 GTF3C2Q8WUA4 911 aaPredicted RBP22.26■■□□□ 1.15
LTBP4-223ENST00000598717 AIFM3Q96NN9 605 aa22.26■■□□□ 1.15
LTBP4-223ENST00000598717 ZIC5Q96T25 663 aa22.26■■□□□ 1.15
LTBP4-223ENST00000598717 IGF2BP3O00425 579 aaKnown RBP eCLIP22.25■■□□□ 1.15
LTBP4-223ENST00000598717 VEGFBP49765 207 aa22.25■■□□□ 1.15
LTBP4-223ENST00000598717 FOSBP53539 338 aa22.25■■□□□ 1.15
LTBP4-223ENST00000598717 LBX2Q6XYB7 198 aa22.25■■□□□ 1.15
LTBP4-223ENST00000598717 CPXCR1Q8N123 301 aa22.25■■□□□ 1.15
LTBP4-223ENST00000598717 GPKOWQ92917 476 aaPredicted RBP eCLIP22.25■■□□□ 1.153e-6■■□□□ 11.6
LTBP4-223ENST00000598717 C8orf76Q96K31 380 aa22.25■■□□□ 1.15
LTBP4-223ENST00000598717 ICAM1P05362 532 aa22.24■■□□□ 1.15
LTBP4-223ENST00000598717 OAZ1P54368 228 aa22.24■■□□□ 1.15
LTBP4-223ENST00000598717 USH1GQ495M9 461 aa22.24■■□□□ 1.15
LTBP4-223ENST00000598717 WWC2Q6AWC2 1192 aa22.24■■□□□ 1.15
LTBP4-223ENST00000598717 CCDC12Q8WUD4 166 aaPredicted RBP22.24■■□□□ 1.15
LTBP4-223ENST00000598717 COA7Q96BR5 231 aa22.24■■□□□ 1.15
LTBP4-223ENST00000598717 PAGR1Q9BTK6 254 aa22.24■■□□□ 1.15
LTBP4-223ENST00000598717 RAVER2Q9HCJ3 691 aaKnown RBP22.24■■□□□ 1.15
LTBP4-223ENST00000598717 BARHL2Q9NY43 387 aa22.24■■□□□ 1.15
LTBP4-223ENST00000598717 CCPG1Q9ULG6 757 aa22.24■■□□□ 1.15
LTBP4-223ENST00000598717 PCDHA1Q9Y5I3 950 aa22.24■■□□□ 1.15
LTBP4-223ENST00000598717 H3BQV1 296 aa22.23■■□□□ 1.15
LTBP4-223ENST00000598717 PPP1R11O60927 126 aaPredicted RBP22.23■■□□□ 1.15
LTBP4-223ENST00000598717 MAP2K2P36507 400 aa22.23■■□□□ 1.15
LTBP4-223ENST00000598717 NAPAP54920 295 aa22.23■■□□□ 1.15
LTBP4-223ENST00000598717 PLS1Q14651 629 aa22.23■■□□□ 1.15
LTBP4-223ENST00000598717 TAF1CQ15572 869 aaPredicted RBP22.23■■□□□ 1.15
LTBP4-223ENST00000598717 IFFO2Q5TF58 517 aa22.23■■□□□ 1.15
LTBP4-223ENST00000598717 CCDC148Q8NFR7 591 aa22.23■■□□□ 1.15
LTBP4-223ENST00000598717 SH3GLB2Q9NR46 395 aa22.23■■□□□ 1.15
LTBP4-223ENST00000598717 VPS54Q9P1Q0 977 aa22.23■■□□□ 1.15
LTBP4-223ENST00000598717 BAZ2BQ9UIF8 2168 aaKnown RBP22.23■■□□□ 1.15
LTBP4-223ENST00000598717 STXBP3O00186 592 aa22.22■■□□□ 1.15
LTBP4-223ENST00000598717 ALDH1A1P00352 501 aa22.22■■□□□ 1.15
LTBP4-223ENST00000598717 PDIA4P13667 645 aaKnown RBP22.22■■□□□ 1.15
LTBP4-223ENST00000598717 GCLCP48506 637 aaPredicted RBP22.22■■□□□ 1.15
LTBP4-223ENST00000598717 TMEM132BQ14DG7 1078 aa22.22■■□□□ 1.15
LTBP4-223ENST00000598717 REPS2Q8NFH8 660 aa22.22■■□□□ 1.15
LTBP4-223ENST00000598717 AGBL1Q96MI9 1066 aa22.22■■□□□ 1.15
LTBP4-223ENST00000598717 RABGAP1Q9Y3P9 1069 aa22.22■■□□□ 1.15
LTBP4-223ENST00000598717 ZNF536O15090 1300 aa22.22■■□□□ 1.15
LTBP4-223ENST00000598717 ATP2A1O14983 1001 aa22.21■■□□□ 1.15
LTBP4-223ENST00000598717 SYT1P21579 422 aa22.21■■□□□ 1.15
LTBP4-223ENST00000598717 STAT3P40763 770 aa22.21■■□□□ 1.15
LTBP4-223ENST00000598717 NLRP5P59047 1200 aa22.21■■□□□ 1.15
LTBP4-223ENST00000598717 SNRNP48Q6IEG0 339 aaKnown RBP22.21■■□□□ 1.15
LTBP4-223ENST00000598717 PPP1R18Q6NYC8 613 aa22.21■■□□□ 1.15
LTBP4-223ENST00000598717 FAM177A1Q8N128 213 aaPredicted RBP22.21■■□□□ 1.15
LTBP4-223ENST00000598717 TEX13BQ9BXU2 312 aa22.21■■□□□ 1.15
LTBP4-223ENST00000598717 ZFYVE28Q9HCC9 887 aa22.21■■□□□ 1.15
LTBP4-223ENST00000598717 MRPL11Q9Y3B7 192 aaKnown RBP22.21■■□□□ 1.15
LTBP4-223ENST00000598717 ABCB11O95342 1321 aa22.21■■□□□ 1.15
LTBP4-223ENST00000598717 PARP14Q460N5 1801 aa22.2■■□□□ 1.14
LTBP4-223ENST00000598717 RLFQ13129 1914 aa22.2■■□□□ 1.14
LTBP4-223ENST00000598717 ALAS1P13196 640 aa22.2■■□□□ 1.14
LTBP4-223ENST00000598717 GUCY1B3Q02153 619 aa22.2■■□□□ 1.14
LTBP4-223ENST00000598717 KRT40Q6A162 431 aa22.2■■□□□ 1.14
LTBP4-223ENST00000598717 FBXO18Q8NFZ0 1043 aa22.2■■□□□ 1.14
LTBP4-223ENST00000598717 BTBD7Q9P203 1132 aa22.2■■□□□ 1.14
LTBP4-223ENST00000598717 RBPJLQ9UBG7 517 aa22.2■■□□□ 1.14
LTBP4-223ENST00000598717 ZNF214Q9UL59 606 aaPredicted RBP22.2■■□□□ 1.14
LTBP4-223ENST00000598717 MYH6P13533 1939 aa22.19■■□□□ 1.14
LTBP4-223ENST00000598717 VPS37CA5D8V6 355 aaPredicted RBP22.19■■□□□ 1.14
LTBP4-223ENST00000598717 SMCO2A6NFE2 343 aa22.19■■□□□ 1.14
LTBP4-223ENST00000598717 STX6O43752 255 aa22.19■■□□□ 1.14
LTBP4-223ENST00000598717 SAFBQ15424 915 aaKnown RBP eCLIP22.19■■□□□ 1.14
LTBP4-223ENST00000598717 RGS22Q8NE09 1264 aa22.19■■□□□ 1.14
LTBP4-223ENST00000598717 C6orf50Q9HD87 102 aa22.19■■□□□ 1.14
LTBP4-223ENST00000598717 GJB4Q9NTQ9 266 aa22.19■■□□□ 1.14
LTBP4-223ENST00000598717 KCNJ14Q9UNX9 436 aa22.19■■□□□ 1.14
LTBP4-223ENST00000598717 CNMDO75829 334 aa22.18■■□□□ 1.14
LTBP4-223ENST00000598717 CALML3P27482 149 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms