RNA–Protein interactions for RNA: ENST00000562785.1

CHD9-205, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 359 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-205ENST00000562785 YOD1Q5VVQ6 348 aaPredicted RBP8.09□□□□□ -1.11
CHD9-205ENST00000562785 C16orf86Q6ZW13 317 aa8.09□□□□□ -1.11
CHD9-205ENST00000562785 KIAA0907Q7Z7F0 614 aaPredicted RBP8.09□□□□□ -1.11
CHD9-205ENST00000562785 SYNPOQ8N3V7 929 aa8.09□□□□□ -1.11
CHD9-205ENST00000562785 KISS1RQ969F8 398 aaPredicted RBP8.09□□□□□ -1.11
CHD9-205ENST00000562785 EXOC2Q96KP1 924 aa8.09□□□□□ -1.11
CHD9-205ENST00000562785 HSPA12BQ96MM6 686 aa8.09□□□□□ -1.11
CHD9-205ENST00000562785 NKX2-4Q9H2Z4 354 aa8.09□□□□□ -1.11
CHD9-205ENST00000562785 SEMA3GQ9NS98 782 aa8.09□□□□□ -1.11
CHD9-205ENST00000562785 SNX11Q9Y5W9 270 aa8.09□□□□□ -1.11
CHD9-205ENST00000562785 WDR97A6NE52 1622 aa8.09□□□□□ -1.11
CHD9-205ENST00000562785 TMEM265A0A087WTH1 108 aa8.08□□□□□ -1.12
CHD9-205ENST00000562785 H3BS24 57 aa8.08□□□□□ -1.12
CHD9-205ENST00000562785 MEIS1O00470 390 aa8.08□□□□□ -1.12
CHD9-205ENST00000562785 CLSTN1O94985 981 aa8.08□□□□□ -1.12
CHD9-205ENST00000562785 AMPD2Q01433 879 aa8.08□□□□□ -1.12
CHD9-205ENST00000562785 GAB4Q2WGN9 574 aa8.08□□□□□ -1.12
CHD9-205ENST00000562785 CRTC3Q6UUV7 619 aa8.08□□□□□ -1.12
CHD9-205ENST00000562785 TCTN2Q96GX1 697 aa8.08□□□□□ -1.12
CHD9-205ENST00000562785 CDC6Q99741 560 aa8.08□□□□□ -1.12
CHD9-205ENST00000562785 ZC3H7BQ9UGR2 993 aaKnown RBP8.08□□□□□ -1.12
CHD9-205ENST00000562785 PITPNM2Q9BZ72 1349 aa8.07□□□□□ -1.12
CHD9-205ENST00000562785 TRBV23-1A0A0A0MS06 115 aa8.07□□□□□ -1.12
CHD9-205ENST00000562785 PABPC1P11940 636 aaKnown RBP8.07□□□□□ -1.12
CHD9-205ENST00000562785 TPP2P29144 1249 aaPredicted RBP8.07□□□□□ -1.12
CHD9-205ENST00000562785 BMP8BP34820 402 aa8.07□□□□□ -1.12
CHD9-205ENST00000562785 GFRA1P56159 465 aa8.07□□□□□ -1.12
CHD9-205ENST00000562785 POU4F1Q01851 419 aa8.07□□□□□ -1.12
CHD9-205ENST00000562785 FAM209AQ5JX71 171 aa8.07□□□□□ -1.12
CHD9-205ENST00000562785 CWF19L1Q69YN2 538 aaKnown RBP8.07□□□□□ -1.12
CHD9-205ENST00000562785 ZNF662Q6ZS27 426 aa8.07□□□□□ -1.12
CHD9-205ENST00000562785 SCUBE1Q8IWY4 988 aa8.07□□□□□ -1.12
CHD9-205ENST00000562785 OSBP2Q969R2 916 aa8.07□□□□□ -1.12
CHD9-205ENST00000562785 FEZ1Q99689 392 aa8.07□□□□□ -1.12
CHD9-205ENST00000562785 IER2Q9BTL4 223 aa8.07□□□□□ -1.12
CHD9-205ENST00000562785 DHRS4Q9BTZ2 278 aa8.07□□□□□ -1.12
CHD9-205ENST00000562785 CYP26B1Q9NR63 512 aa8.07□□□□□ -1.12
CHD9-205ENST00000562785 MRPS23Q9Y3D9 190 aaKnown RBP8.07□□□□□ -1.12
CHD9-205ENST00000562785 SBNO2Q9Y2G9 1366 aa8.07□□□□□ -1.12
CHD9-205ENST00000562785 KIF21BO75037 1637 aa8.07□□□□□ -1.12
CHD9-205ENST00000562785 POLA1P09884 1462 aaPredicted RBP8.06□□□□□ -1.12
CHD9-205ENST00000562785 KIF27Q86VH2 1401 aa8.06□□□□□ -1.12
CHD9-205ENST00000562785 PRODHO43272 600 aa8.06□□□□□ -1.12
CHD9-205ENST00000562785 ASMTLO95671 621 aa8.06□□□□□ -1.12
CHD9-205ENST00000562785 TGFB1P01137 390 aa8.06□□□□□ -1.12
CHD9-205ENST00000562785 SCG5P05408 212 aa8.06□□□□□ -1.12
CHD9-205ENST00000562785 HOXC12P31275 282 aa8.06□□□□□ -1.12
CHD9-205ENST00000562785 L1CAMP32004 1257 aa8.06□□□□□ -1.12
CHD9-205ENST00000562785 TCEA2Q15560 299 aa8.06□□□□□ -1.12
CHD9-205ENST00000562785 TKFCQ3LXA3 575 aa8.06□□□□□ -1.12
CHD9-205ENST00000562785 TMPRSS7Q7RTY8 843 aa8.06□□□□□ -1.12
CHD9-205ENST00000562785 CCDC140Q96MF4 163 aa8.06□□□□□ -1.12
CHD9-205ENST00000562785 ZSWIM5Q9P217 1185 aa8.06□□□□□ -1.12
CHD9-205ENST00000562785 GPR55Q9Y2T6 319 aaPredicted RBP8.06□□□□□ -1.12
CHD9-205ENST00000562785 ABCA10Q8WWZ4 1543 aa8.06□□□□□ -1.12
CHD9-205ENST00000562785 WASH4PA8MWX3 477 aa8.05□□□□□ -1.12
CHD9-205ENST00000562785 VAMP4O75379 141 aa8.05□□□□□ -1.12
CHD9-205ENST00000562785 ZNF205O95201 554 aa8.05□□□□□ -1.12
CHD9-205ENST00000562785 CD3EP07766 207 aa8.05□□□□□ -1.12
CHD9-205ENST00000562785 HOXA10P31260 410 aaPredicted RBP8.05□□□□□ -1.12
CHD9-205ENST00000562785 SUMO1P63165 101 aaKnown RBP8.05□□□□□ -1.12
CHD9-205ENST00000562785 MAP4K2Q12851 820 aa8.05□□□□□ -1.12
CHD9-205ENST00000562785 MSMPQ1L6U9 139 aa8.05□□□□□ -1.12
CHD9-205ENST00000562785 PRSS36Q5K4E3 855 aa8.05□□□□□ -1.12
CHD9-205ENST00000562785 NSMFQ6X4W1 530 aa8.05□□□□□ -1.12
CHD9-205ENST00000562785 LINC00116Q8NCU8 138 aa8.05□□□□□ -1.12
CHD9-205ENST00000562785 UBE2FQ969M7 185 aa8.05□□□□□ -1.12
CHD9-205ENST00000562785 C1orf159Q96HA4 380 aa8.05□□□□□ -1.12
CHD9-205ENST00000562785 IPO9Q96P70 1041 aaKnown RBP8.05□□□□□ -1.12
CHD9-205ENST00000562785 MCMBPQ9BTE3 642 aa8.05□□□□□ -1.12
CHD9-205ENST00000562785 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.05□□□□□ -1.12
CHD9-205ENST00000562785 DNAJC25-GNG10A0A024R161 153 aa8.04□□□□□ -1.12
CHD9-205ENST00000562785 AURKAO14965 403 aa8.04□□□□□ -1.12
CHD9-205ENST00000562785 DLX3O60479 287 aa8.04□□□□□ -1.12
CHD9-205ENST00000562785 SNRPB2P08579 225 aaKnown RBP8.04□□□□□ -1.12
CHD9-205ENST00000562785 FURINP09958 794 aa8.04□□□□□ -1.12
CHD9-205ENST00000562785 VAV1P15498 845 aa8.04□□□□□ -1.12
CHD9-205ENST00000562785 CYP4F3Q08477 520 aa8.04□□□□□ -1.12
CHD9-205ENST00000562785 SF1Q15637 639 aaKnown RBP8.04□□□□□ -1.12
CHD9-205ENST00000562785 DPY19L1Q2PZI1 675 aa8.04□□□□□ -1.12
CHD9-205ENST00000562785 USHBP1Q8N6Y0 703 aa8.04□□□□□ -1.12
CHD9-205ENST00000562785 KCTD13Q8WZ19 329 aa8.04□□□□□ -1.12
CHD9-205ENST00000562785 HRASLS5Q96KN8 279 aa8.04□□□□□ -1.12
CHD9-205ENST00000562785 SLC12A9Q9BXP2 914 aa8.04□□□□□ -1.12
CHD9-205ENST00000562785 NCOA5Q9HCD5 579 aaKnown RBP8.04□□□□□ -1.12
CHD9-205ENST00000562785 DUSP13Q9UII6 198 aa8.04□□□□□ -1.12
CHD9-205ENST00000562785 BACE2Q9Y5Z0 518 aa8.04□□□□□ -1.12
CHD9-205ENST00000562785 ERICH3Q5RHP9 1530 aa8.03□□□□□ -1.12
CHD9-205ENST00000562785 CUL7Q14999 1698 aa8.03□□□□□ -1.12
CHD9-205ENST00000562785 STXBP3O00186 592 aa8.03□□□□□ -1.12
CHD9-205ENST00000562785 PPP1R12AO14974 1030 aaPredicted RBP8.03□□□□□ -1.12
CHD9-205ENST00000562785 CPP00450 1065 aa8.03□□□□□ -1.12
CHD9-205ENST00000562785 SYPP08247 313 aa8.03□□□□□ -1.12
CHD9-205ENST00000562785 NOP2P46087 812 aaKnown RBP8.03□□□□□ -1.12
CHD9-205ENST00000562785 PCBP3P57721 371 aaKnown RBP8.03□□□□□ -1.12
CHD9-205ENST00000562785 SCRN1Q12765 414 aa8.03□□□□□ -1.12
CHD9-205ENST00000562785 SLC35F1Q5T1Q4 408 aa8.03□□□□□ -1.12
CHD9-205ENST00000562785 RNF111Q6ZNA4 994 aa8.03□□□□□ -1.12
CHD9-205ENST00000562785 COPS5Q92905 334 aa8.03□□□□□ -1.12
CHD9-205ENST00000562785 MISP3Q96FF7 219 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms