RNA–Protein interactions for RNA: ENST00000503291.5

CDC42SE2-206, Transcript of CDC42 small effector 2, humanhuman

TSL 1 (best) BASIC

Gene CDC42SE2, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-206ENST00000503291 SLC38A10Q9HBR0 1119 aa23.57■■□□□ 1.36
CDC42SE2-206ENST00000503291 PPP1R11O60927 126 aaPredicted RBP23.57■■□□□ 1.36
CDC42SE2-206ENST00000503291 FDX1P10109 184 aa23.57■■□□□ 1.36
CDC42SE2-206ENST00000503291 KIF23Q02241 960 aaPredicted RBP23.57■■□□□ 1.36
CDC42SE2-206ENST00000503291 NOGQ13253 232 aa23.57■■□□□ 1.36
CDC42SE2-206ENST00000503291 LARP1BQ659C4 914 aaKnown RBP23.56■■□□□ 1.36
CDC42SE2-206ENST00000503291 CCDC174Q6PII3 467 aa23.56■■□□□ 1.36
CDC42SE2-206ENST00000503291 GPKOWQ92917 476 aaPredicted RBP eCLIP23.56■■□□□ 1.36
CDC42SE2-206ENST00000503291 GJB4Q9NTQ9 266 aa23.56■■□□□ 1.36
CDC42SE2-206ENST00000503291 PNMA3Q9UL41 463 aa23.56■■□□□ 1.36
CDC42SE2-206ENST00000503291 ZBED4O75132 1171 aa23.55■■□□□ 1.36
CDC42SE2-206ENST00000503291 IGF2BP3O00425 579 aaKnown RBP eCLIP23.55■■□□□ 1.36
CDC42SE2-206ENST00000503291 CYP2C8P10632 490 aa23.55■■□□□ 1.36
CDC42SE2-206ENST00000503291 HERVK_113P62684 666 aa23.55■■□□□ 1.36
CDC42SE2-206ENST00000503291 SREBF2Q12772 1141 aa23.55■■□□□ 1.36
CDC42SE2-206ENST00000503291 WWC2Q6AWC2 1192 aa23.55■■□□□ 1.36
CDC42SE2-206ENST00000503291 HEATR3Q7Z4Q2 680 aa23.55■■□□□ 1.36
CDC42SE2-206ENST00000503291 CTDP1Q9Y5B0 961 aaPredicted RBP23.55■■□□□ 1.36
CDC42SE2-206ENST00000503291 AOC2O75106 756 aa23.54■■□□□ 1.36
CDC42SE2-206ENST00000503291 TM4SF4P48230 202 aa23.54■■□□□ 1.36
CDC42SE2-206ENST00000503291 FOSBP53539 338 aa23.54■■□□□ 1.36
CDC42SE2-206ENST00000503291 POTEEQ6S8J3 1075 aa23.54■■□□□ 1.36
CDC42SE2-206ENST00000503291 FBXO11Q86XK2 927 aa23.54■■□□□ 1.36
CDC42SE2-206ENST00000503291 CPXCR1Q8N123 301 aa23.54■■□□□ 1.36
CDC42SE2-206ENST00000503291 AMNQ9BXJ7 453 aa23.54■■□□□ 1.36
CDC42SE2-206ENST00000503291 BARHL2Q9NY43 387 aa23.54■■□□□ 1.36
CDC42SE2-206ENST00000503291 VPS54Q9P1Q0 977 aa23.54■■□□□ 1.36
CDC42SE2-206ENST00000503291 ZNF536O15090 1300 aa23.54■■□□□ 1.36
CDC42SE2-206ENST00000503291 PDCP20941 246 aa23.54■■□□□ 1.36
CDC42SE2-206ENST00000503291 C1QTNF8P60827 252 aa23.54■■□□□ 1.36
CDC42SE2-206ENST00000503291 LBX2Q6XYB7 198 aa23.54■■□□□ 1.36
CDC42SE2-206ENST00000503291 IFNL1Q8IU54 200 aa23.54■■□□□ 1.36
CDC42SE2-206ENST00000503291 REPS2Q8NFH8 660 aa23.54■■□□□ 1.36
CDC42SE2-206ENST00000503291 COA7Q96BR5 231 aa23.54■■□□□ 1.36
CDC42SE2-206ENST00000503291 C8orf76Q96K31 380 aa23.54■■□□□ 1.36
CDC42SE2-206ENST00000503291 SYT1P21579 422 aa23.53■■□□□ 1.36
CDC42SE2-206ENST00000503291 SHISA4Q96DD7 197 aa23.53■■□□□ 1.36
CDC42SE2-206ENST00000503291 RAVER2Q9HCJ3 691 aaKnown RBP23.53■■□□□ 1.36
CDC42SE2-206ENST00000503291 PCDHA1Q9Y5I3 950 aa23.53■■□□□ 1.36
CDC42SE2-206ENST00000503291 ICAM1P05362 532 aa23.52■■□□□ 1.36
CDC42SE2-206ENST00000503291 TMEM132BQ14DG7 1078 aa23.52■■□□□ 1.36
CDC42SE2-206ENST00000503291 USH1GQ495M9 461 aa23.52■■□□□ 1.36
CDC42SE2-206ENST00000503291 OTUD7BQ6GQQ9 843 aa23.52■■□□□ 1.36
CDC42SE2-206ENST00000503291 TYW1BQ6NUM6 668 aa23.52■■□□□ 1.36
CDC42SE2-206ENST00000503291 AGBL1Q96MI9 1066 aa23.52■■□□□ 1.36
CDC42SE2-206ENST00000503291 WDR33Q9C0J8 1336 aaKnown RBP23.52■■□□□ 1.36
CDC42SE2-206ENST00000503291 STXBP3O00186 592 aa23.52■■□□□ 1.36
CDC42SE2-206ENST00000503291 XBP1P17861 261 aa23.52■■□□□ 1.36
CDC42SE2-206ENST00000503291 DDIT3P35638 169 aa23.52■■□□□ 1.36
CDC42SE2-206ENST00000503291 MB21D1Q8N884 522 aa23.52■■□□□ 1.36
CDC42SE2-206ENST00000503291 SMCR8Q8TEV9 937 aaPredicted RBP23.52■■□□□ 1.36
CDC42SE2-206ENST00000503291 ZCCHC17Q9NP64 241 aaKnown RBP23.52■■□□□ 1.36
CDC42SE2-206ENST00000503291 SH3GLB2Q9NR46 395 aa23.52■■□□□ 1.36
CDC42SE2-206ENST00000503291 ZNF214Q9UL59 606 aaPredicted RBP23.52■■□□□ 1.36
CDC42SE2-206ENST00000503291 hCG_1984214I3L0E3 225 aa23.51■■□□□ 1.35
CDC42SE2-206ENST00000503291 VEGFBP49765 207 aa23.51■■□□□ 1.35
CDC42SE2-206ENST00000503291 GUCY1B3Q02153 619 aa23.51■■□□□ 1.35
CDC42SE2-206ENST00000503291 ZNF713Q8N859 430 aaPredicted RBP23.51■■□□□ 1.35
CDC42SE2-206ENST00000503291 FBXO18Q8NFZ0 1043 aa23.51■■□□□ 1.35
CDC42SE2-206ENST00000503291 PEX10O60683 326 aa23.5■■□□□ 1.35
CDC42SE2-206ENST00000503291 TAL1P17542 331 aaPredicted RBP23.5■■□□□ 1.35
CDC42SE2-206ENST00000503291 OAZ1P54368 228 aa23.5■■□□□ 1.35
CDC42SE2-206ENST00000503291 TRIM29Q14134 588 aa23.5■■□□□ 1.35
CDC42SE2-206ENST00000503291 PARK7Q99497 189 aaKnown RBP23.5■■□□□ 1.35
CDC42SE2-206ENST00000503291 BTBD7Q9P203 1132 aa23.5■■□□□ 1.35
CDC42SE2-206ENST00000503291 RBPJLQ9UBG7 517 aa23.5■■□□□ 1.35
CDC42SE2-206ENST00000503291 CCPG1Q9ULG6 757 aa23.5■■□□□ 1.35
CDC42SE2-206ENST00000503291 KCNJ14Q9UNX9 436 aa23.5■■□□□ 1.35
CDC42SE2-206ENST00000503291 COL11A1P12107 1806 aaPredicted RBP23.5■■□□□ 1.35
CDC42SE2-206ENST00000503291 H3BQV1 296 aa23.5■■□□□ 1.35
CDC42SE2-206ENST00000503291 ATP2A1O14983 1001 aa23.5■■□□□ 1.35
CDC42SE2-206ENST00000503291 HSPA6P17066 643 aa23.5■■□□□ 1.35
CDC42SE2-206ENST00000503291 NAPAP54920 295 aa23.5■■□□□ 1.35
CDC42SE2-206ENST00000503291 TRAF1Q13077 416 aa23.5■■□□□ 1.35
CDC42SE2-206ENST00000503291 IFFO2Q5TF58 517 aa23.5■■□□□ 1.35
CDC42SE2-206ENST00000503291 KRT40Q6A162 431 aa23.5■■□□□ 1.35
CDC42SE2-206ENST00000503291 PAGR1Q9BTK6 254 aa23.5■■□□□ 1.35
CDC42SE2-206ENST00000503291 SMCHD1A6NHR9 2005 aa23.5■■□□□ 1.35
CDC42SE2-206ENST00000503291 PLS1Q14651 629 aa23.49■■□□□ 1.35
CDC42SE2-206ENST00000503291 STX6O43752 255 aa23.49■■□□□ 1.35
CDC42SE2-206ENST00000503291 REM2Q8IYK8 340 aaPredicted RBP23.49■■□□□ 1.35
CDC42SE2-206ENST00000503291 GTF3C2Q8WUA4 911 aaPredicted RBP23.49■■□□□ 1.35
CDC42SE2-206ENST00000503291 CCDC12Q8WUD4 166 aaPredicted RBP23.49■■□□□ 1.35
CDC42SE2-206ENST00000503291 TEX13BQ9BXU2 312 aa23.49■■□□□ 1.35
CDC42SE2-206ENST00000503291 TXNRD2Q9NNW7 524 aa23.49■■□□□ 1.35
CDC42SE2-206ENST00000503291 PNMA2Q9UL42 364 aa23.49■■□□□ 1.35
CDC42SE2-206ENST00000503291 RABGAP1Q9Y3P9 1069 aa23.49■■□□□ 1.35
CDC42SE2-206ENST00000503291 MAP2K2P36507 400 aa23.48■■□□□ 1.35
CDC42SE2-206ENST00000503291 STAT3P40763 770 aa23.48■■□□□ 1.35
CDC42SE2-206ENST00000503291 NLRP5P59047 1200 aa23.48■■□□□ 1.35
CDC42SE2-206ENST00000503291 PKP1Q13835 747 aa23.48■■□□□ 1.35
CDC42SE2-206ENST00000503291 TAF1CQ15572 869 aaPredicted RBP23.48■■□□□ 1.35
CDC42SE2-206ENST00000503291 SNRNP48Q6IEG0 339 aaKnown RBP23.48■■□□□ 1.35
CDC42SE2-206ENST00000503291 CCDC148Q8NFR7 591 aa23.48■■□□□ 1.35
CDC42SE2-206ENST00000503291 PHF20Q9BVI0 1012 aa23.48■■□□□ 1.35
CDC42SE2-206ENST00000503291 CNMDO75829 334 aa23.47■■□□□ 1.35
CDC42SE2-206ENST00000503291 RIPK3Q9Y572 518 aa23.47■■□□□ 1.35
CDC42SE2-206ENST00000503291 VPS37CA5D8V6 355 aaPredicted RBP23.47■■□□□ 1.35
CDC42SE2-206ENST00000503291 SMCO2A6NFE2 343 aa23.47■■□□□ 1.35
CDC42SE2-206ENST00000503291 ALAS1P13196 640 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms