RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 H3BQV1 296 aa23.84■■□□□ 1.41
SHISA4-201ENST00000362011 PLA2G6O60733 806 aa23.84■■□□□ 1.41
SHISA4-201ENST00000362011 VCAM1P19320 739 aa23.84■■□□□ 1.41
SHISA4-201ENST00000362011 PKN1Q16512 942 aa23.84■■□□□ 1.41
SHISA4-201ENST00000362011 PFKFB3Q16875 520 aaPredicted RBP23.84■■□□□ 1.41
SHISA4-201ENST00000362011 SYDE2Q5VT97 1194 aa23.84■■□□□ 1.41
SHISA4-201ENST00000362011 AIFM3Q96NN9 605 aa23.84■■□□□ 1.41
SHISA4-201ENST00000362011 SEC63Q9UGP8 760 aaKnown RBP23.84■■□□□ 1.41
SHISA4-201ENST00000362011 TRIM17Q9Y577 477 aa23.84■■□□□ 1.41
SHISA4-201ENST00000362011 SMCHD1A6NHR9 2005 aa23.83■■□□□ 1.41
SHISA4-201ENST00000362011 VPS37CA5D8V6 355 aaPredicted RBP23.83■■□□□ 1.4
SHISA4-201ENST00000362011 CXCL11O14625 94 aa23.83■■□□□ 1.4
SHISA4-201ENST00000362011 SCG2P13521 617 aa23.83■■□□□ 1.4
SHISA4-201ENST00000362011 TRIM29Q14134 588 aa23.83■■□□□ 1.4
SHISA4-201ENST00000362011 HOMER1Q86YM7 354 aa23.83■■□□□ 1.4
SHISA4-201ENST00000362011 RGS22Q8NE09 1264 aa23.83■■□□□ 1.4
SHISA4-201ENST00000362011 PIGSQ96S52 555 aa23.83■■□□□ 1.4
SHISA4-201ENST00000362011 JMJD4Q9H9V9 463 aa23.83■■□□□ 1.4
SHISA4-201ENST00000362011 KCNH4Q9UQ05 1017 aa23.83■■□□□ 1.4
SHISA4-201ENST00000362011 IRF6O14896 467 aa23.82■■□□□ 1.4
SHISA4-201ENST00000362011 XBP1P17861 261 aa23.82■■□□□ 1.4
SHISA4-201ENST00000362011 PKP1Q13835 747 aa23.82■■□□□ 1.4
SHISA4-201ENST00000362011 PTPN18Q99952 460 aa23.82■■□□□ 1.4
SHISA4-201ENST00000362011 RPAP3Q9H6T3 665 aaPredicted RBP23.82■■□□□ 1.4
SHISA4-201ENST00000362011 MTMR8Q96EF0 704 aa23.81■■□□□ 1.4
SHISA4-201ENST00000362011 ERO1AQ96HE7 468 aa23.81■■□□□ 1.4
SHISA4-201ENST00000362011 TANGO6Q9C0B7 1094 aa23.81■■□□□ 1.4
SHISA4-201ENST00000362011 PRR12Q9ULL5 1215 aa23.81■■□□□ 1.4
SHISA4-201ENST00000362011 MTMR6Q9Y217 621 aa23.81■■□□□ 1.4
SHISA4-201ENST00000362011 PTPN22Q9Y2R2 807 aa23.81■■□□□ 1.4
SHISA4-201ENST00000362011 A0A0G2JMZ2 1700 aa23.81■■□□□ 1.4
SHISA4-201ENST00000362011 A0A0G2JLL6 359 aaPredicted RBP23.8■■□□□ 1.4
SHISA4-201ENST00000362011 BRD1O95696 1058 aa23.8■■□□□ 1.4
SHISA4-201ENST00000362011 GUCY1B3Q02153 619 aa23.8■■□□□ 1.4
SHISA4-201ENST00000362011 CRHR2Q13324 411 aa23.8■■□□□ 1.4
SHISA4-201ENST00000362011 PRRT2Q7Z6L0 340 aaPredicted RBP23.8■■□□□ 1.4
SHISA4-201ENST00000362011 PNMA6FA0A0J9YX94 578 aa23.79■■□□□ 1.4
SHISA4-201ENST00000362011 ZSCAN22P10073 491 aaPredicted RBP23.79■■□□□ 1.4
SHISA4-201ENST00000362011 KRT40Q6A162 431 aa23.79■■□□□ 1.4
SHISA4-201ENST00000362011 OTUD7BQ6GQQ9 843 aa23.79■■□□□ 1.4
SHISA4-201ENST00000362011 GADL1Q6ZQY3 521 aa23.79■■□□□ 1.4
SHISA4-201ENST00000362011 PROCA1Q8NCQ7 364 aaPredicted RBP23.79■■□□□ 1.4
SHISA4-201ENST00000362011 FBXO18Q8NFZ0 1043 aa23.79■■□□□ 1.4
SHISA4-201ENST00000362011 ARMC5Q96C12 935 aa23.79■■□□□ 1.4
SHISA4-201ENST00000362011 MS4A4AQ96JQ5 239 aa23.79■■□□□ 1.4
SHISA4-201ENST00000362011 POTEFA5A3E0 1075 aa23.78■■□□□ 1.4
SHISA4-201ENST00000362011 hCG_1984214I3L0E3 225 aa23.78■■□□□ 1.4
SHISA4-201ENST00000362011 ZBTB5O15062 677 aa23.78■■□□□ 1.4
SHISA4-201ENST00000362011 CAP1Q01518 475 aa23.78■■□□□ 1.4
SHISA4-201ENST00000362011 CDC37Q16543 378 aaPredicted RBP23.78■■□□□ 1.4
SHISA4-201ENST00000362011 ZNF713Q8N859 430 aaPredicted RBP23.78■■□□□ 1.4
SHISA4-201ENST00000362011 GPKOWQ92917 476 aaPredicted RBP eCLIP23.78■■□□□ 1.4
SHISA4-201ENST00000362011 KIFC2Q96AC6 838 aa23.78■■□□□ 1.4
SHISA4-201ENST00000362011 SLF1Q9BQI6 1058 aa23.78■■□□□ 1.4
SHISA4-201ENST00000362011 SH3GLB2Q9NR46 395 aa23.78■■□□□ 1.4
SHISA4-201ENST00000362011 GJB4Q9NTQ9 266 aa23.78■■□□□ 1.4
SHISA4-201ENST00000362011 FBXO28Q9NVF7 368 aa23.78■■□□□ 1.4
SHISA4-201ENST00000362011 VPS54Q9P1Q0 977 aa23.78■■□□□ 1.4
SHISA4-201ENST00000362011 ZDHHC9Q9Y397 364 aa23.78■■□□□ 1.4
SHISA4-201ENST00000362011 MKI67P46013 3256 aaKnown RBP23.77■■□□□ 1.4
SHISA4-201ENST00000362011 USP17L15C9J2P7 530 aa23.77■■□□□ 1.4
SHISA4-201ENST00000362011 USP17L13C9JLJ4 530 aa23.77■■□□□ 1.4
SHISA4-201ENST00000362011 USP17L11C9JVI0 530 aa23.77■■□□□ 1.4
SHISA4-201ENST00000362011 USP17L18D6R9N7 530 aa23.77■■□□□ 1.4
SHISA4-201ENST00000362011 USP17L22D6RA61 530 aa23.77■■□□□ 1.4
SHISA4-201ENST00000362011 USP17L17D6RBQ6 530 aa23.77■■□□□ 1.4
SHISA4-201ENST00000362011 USP17L19D6RCP7 530 aa23.77■■□□□ 1.4
SHISA4-201ENST00000362011 USP17L20D6RJB6 530 aa23.77■■□□□ 1.4
SHISA4-201ENST00000362011 FLOT1O75955 427 aa23.77■■□□□ 1.4
SHISA4-201ENST00000362011 USP17L24Q0WX57 530 aa23.77■■□□□ 1.4
SHISA4-201ENST00000362011 SNAPC2Q13487 334 aa23.77■■□□□ 1.4
SHISA4-201ENST00000362011 QRICH1Q2TAL8 776 aa23.77■■□□□ 1.4
SHISA4-201ENST00000362011 FOXD4L5Q5VV16 416 aaPredicted RBP23.77■■□□□ 1.4
SHISA4-201ENST00000362011 WWC2Q6AWC2 1192 aa23.77■■□□□ 1.4
SHISA4-201ENST00000362011 HEATR3Q7Z4Q2 680 aa23.77■■□□□ 1.4
SHISA4-201ENST00000362011 PRPF38AQ8NAV1 312 aaKnown RBP23.77■■□□□ 1.4
SHISA4-201ENST00000362011 FOXD4L4Q8WXT5 416 aaPredicted RBP23.77■■□□□ 1.4
SHISA4-201ENST00000362011 BARHL2Q9NY43 387 aa23.77■■□□□ 1.4
SHISA4-201ENST00000362011 SAMD1Q6SPF0 538 aaPredicted RBP23.76■■□□□ 1.39
SHISA4-201ENST00000362011 FAM177A1Q8N128 213 aaPredicted RBP23.76■■□□□ 1.39
SHISA4-201ENST00000362011 CCDC148Q8NFR7 591 aa23.76■■□□□ 1.39
SHISA4-201ENST00000362011 CD99L2Q8TCZ2 262 aa23.76■■□□□ 1.39
SHISA4-201ENST00000362011 CCDC12Q8WUD4 166 aaPredicted RBP23.76■■□□□ 1.39
SHISA4-201ENST00000362011 RANBP17Q9H2T7 1088 aaKnown RBP23.76■■□□□ 1.39
SHISA4-201ENST00000362011 PPP1R9AQ9ULJ8 1098 aa23.76■■□□□ 1.39
SHISA4-201ENST00000362011 STXBP3O00186 592 aa23.75■■□□□ 1.39
SHISA4-201ENST00000362011 F13A1P00488 732 aa23.75■■□□□ 1.39
SHISA4-201ENST00000362011 SP3Q02447 781 aa23.75■■□□□ 1.39
SHISA4-201ENST00000362011 CATSPERGQ6ZRH7 1159 aa23.75■■□□□ 1.39
SHISA4-201ENST00000362011 FASTKD5Q7L8L6 764 aaKnown RBP23.75■■□□□ 1.39
SHISA4-201ENST00000362011 PHF20Q9BVI0 1012 aa23.75■■□□□ 1.39
SHISA4-201ENST00000362011 KCNJ14Q9UNX9 436 aa23.75■■□□□ 1.39
SHISA4-201ENST00000362011 CENPFP49454 3210 aa23.75■■□□□ 1.39
SHISA4-201ENST00000362011 MMP1P03956 469 aa23.74■■□□□ 1.39
SHISA4-201ENST00000362011 FDX1P10109 184 aa23.74■■□□□ 1.39
SHISA4-201ENST00000362011 NAPAP54920 295 aa23.74■■□□□ 1.39
SHISA4-201ENST00000362011 SNAP25P60880 206 aa23.74■■□□□ 1.39
SHISA4-201ENST00000362011 SAFBQ15424 915 aaKnown RBP eCLIP23.74■■□□□ 1.39
SHISA4-201ENST00000362011 MCTP1Q6DN14 999 aa23.74■■□□□ 1.39
SHISA4-201ENST00000362011 FBXO11Q86XK2 927 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms