RNA–Protein interactions for RNA: snR53

snR53, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR53, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR53snR53 PHM8P40025 321 aa-0.84□□□□□ -2.54
snR53snR53 MSY1P48527 492 aa-0.84□□□□□ -2.54
snR53snR53 BIO3P50277 480 aa-0.84□□□□□ -2.54
snR53snR53 SOL4P53315 255 aa-0.84□□□□□ -2.54
snR53snR53 THI20Q08224 551 aa-0.84□□□□□ -2.54
snR53snR53 PRY2P36110 329 aa-0.85□□□□□ -2.55
snR53snR53 YGR153WP48238 217 aa-0.85□□□□□ -2.55
snR53snR53 MNT2P53059 558 aa-0.85□□□□□ -2.55
snR53snR53 YDL057WQ07379 328 aa-0.85□□□□□ -2.55
snR53snR53 RPS21AP0C0V8 87 aaKnown RBP-0.86□□□□□ -2.55
snR53snR53 SNF3P10870 884 aa-0.86□□□□□ -2.55
snR53snR53 APM3P38153 483 aa-0.86□□□□□ -2.55
snR53snR53 VFA1P40080 203 aa-0.86□□□□□ -2.55
snR53snR53 BAT2P47176 376 aaKnown RBP-0.86□□□□□ -2.55
snR53snR53 YPL014WQ02606 381 aa-0.86□□□□□ -2.55
snR53snR53 PLB3Q08108 686 aa-0.86□□□□□ -2.55
snR53snR53 HFI1Q12060 488 aa-0.86□□□□□ -2.55
snR53snR53 CHS1P08004 1131 aa-0.87□□□□□ -2.55
snR53snR53 PET111P08468 800 aa-0.87□□□□□ -2.55
snR53snR53 RPS7AP26786 190 aaKnown RBP-0.87□□□□□ -2.55
snR53snR53 CMK1P27466 446 aaKnown RBP-0.87□□□□□ -2.55
snR53snR53 UTR5P32630 166 aa-0.87□□□□□ -2.55
snR53snR53 PTA1Q01329 785 aaPredicted RBP-0.87□□□□□ -2.55
snR53snR53 DIC1Q06143 298 aa-0.87□□□□□ -2.55
snR53snR53 CUE5Q08412 411 aaKnown RBP-0.87□□□□□ -2.55
snR53snR53 TPS2P31688 896 aaKnown RBP-0.88□□□□□ -2.55
snR53snR53 SPO73P40031 143 aa-0.88□□□□□ -2.55
snR53snR53 MKC7P53379 596 aa-0.88□□□□□ -2.55
snR53snR53 TRS31Q03337 283 aa-0.88□□□□□ -2.55
snR53snR53 YKU80Q04437 629 aa-0.88□□□□□ -2.55
snR53snR53 YOR378WQ08902 515 aa-0.88□□□□□ -2.55
snR53snR53 SLF1Q12034 447 aaKnown RBP-0.88□□□□□ -2.55
snR53snR53 CFT2Q12102 859 aaPredicted RBP-0.88□□□□□ -2.55
snR53snR53 RAX2Q12465 1220 aa-0.88□□□□□ -2.55
snR53snR53 MCM3P24279 971 aaKnown RBP-0.89□□□□□ -2.55
snR53snR53 GAC1P28006 793 aa-0.89□□□□□ -2.55
snR53snR53 PET309P32522 965 aaPredicted RBP-0.89□□□□□ -2.55
snR53snR53 HEL1P36113 551 aa-0.89□□□□□ -2.55
snR53snR53 GAB1P41733 394 aa-0.89□□□□□ -2.55
snR53snR53 WWM1P43582 211 aaKnown RBP-0.89□□□□□ -2.55
snR53snR53 BRO1P48582 844 aa-0.89□□□□□ -2.55
snR53snR53 MUB1Q03162 620 aa-0.89□□□□□ -2.55
snR53snR53 HIP1P06775 603 aa-0.9□□□□□ -2.55
snR53snR53 ADE3P07245 946 aaKnown RBP-0.9□□□□□ -2.55
snR53snR53 CYS4P32582 507 aaKnown RBP-0.9□□□□□ -2.55
snR53snR53 CSR1Q06705 408 aaKnown RBP-0.9□□□□□ -2.55
snR53snR53 SSK1Q07084 712 aa-0.9□□□□□ -2.55
snR53snR53 SSP2Q08646 371 aa-0.9□□□□□ -2.55
snR53snR53 RTK1Q12100 620 aaPredicted RBP-0.9□□□□□ -2.55
snR53snR53 RVB2Q12464 471 aaKnown RBP-0.9□□□□□ -2.55
snR53snR53 APM4Q99186 491 aa-0.9□□□□□ -2.55
snR53snR53 YPR096CO13587 100 aa-0.91□□□□□ -2.56
snR53snR53 FRD1P32614 470 aaKnown RBP-0.91□□□□□ -2.56
snR53snR53 SRP68P38687 599 aaKnown RBP-0.91□□□□□ -2.56
snR53snR53 CKB2P38930 258 aa-0.91□□□□□ -2.56
snR53snR53 CHZ1P40019 153 aaPredicted RBP-0.91□□□□□ -2.56
snR53snR53 YER186CP40101 306 aa-0.91□□□□□ -2.56
snR53snR53 CPR7P47103 393 aa-0.91□□□□□ -2.56
snR53snR53 ESF2P53743 316 aaKnown RBP-0.91□□□□□ -2.56
snR53snR53 YNR071CP53757 342 aa-0.91□□□□□ -2.56
snR53snR53 BAG7Q12128 409 aa-0.91□□□□□ -2.56
snR53snR53 YDL009CQ12210 107 aa-0.91□□□□□ -2.56
snR53snR53 RKM5Q12367 367 aa-0.91□□□□□ -2.56
snR53snR53 NOP56Q12460 504 aaKnown RBP RIP-Chip data-0.91□□□□□ -2.56not detected
snR53snR53 SCH9P11792 824 aaKnown RBP-0.92□□□□□ -2.56
snR53snR53 ATP12P22135 325 aa-0.92□□□□□ -2.56
snR53snR53 SNC1P31109 117 aa-0.92□□□□□ -2.56
snR53snR53 HAT2P39984 401 aa-0.92□□□□□ -2.56
snR53snR53 UTP18P40362 594 aaPredicted RBP-0.92□□□□□ -2.56
snR53snR53 IRC5P43610 853 aa-0.92□□□□□ -2.56
snR53snR53 CTK2P46962 323 aa-0.92□□□□□ -2.56
snR53snR53 YJR030CP47101 745 aa-0.92□□□□□ -2.56
snR53snR53 INN1P53901 409 aa-0.92□□□□□ -2.56
snR53snR53 UGO1Q03327 502 aa-0.92□□□□□ -2.56
snR53snR53 SYO1Q07395 620 aa-0.92□□□□□ -2.56
snR53snR53 ADH1P00330 348 aaKnown RBP-0.93□□□□□ -2.56
snR53snR53 AMD1P15274 810 aaKnown RBP-0.93□□□□□ -2.56
snR53snR53 YSP3P25036 478 aa-0.93□□□□□ -2.56
snR53snR53 RFA2P26754 273 aaKnown RBP-0.93□□□□□ -2.56
snR53snR53 LHS1P36016 881 aa-0.93□□□□□ -2.56
snR53snR53 MIA40P36046 403 aa-0.93□□□□□ -2.56
snR53snR53 MSG5P38590 489 aa-0.93□□□□□ -2.56
snR53snR53 ELO1P39540 310 aa-0.93□□□□□ -2.56
snR53snR53 CSM2P40465 213 aa-0.93□□□□□ -2.56
snR53snR53 POL31P46957 487 aa-0.93□□□□□ -2.56
snR53snR53 YJR096WP47137 282 aa-0.93□□□□□ -2.56
snR53snR53 YGR018CP53211 109 aa-0.93□□□□□ -2.56
snR53snR53 YPL107WQ02873 248 aa-0.93□□□□□ -2.56
snR53snR53 ATG26Q06321 1198 aa-0.93□□□□□ -2.56
snR53snR53 YLR001CQ07895 862 aa-0.93□□□□□ -2.56
snR53snR53 FDH1Q08911 376 aa-0.93□□□□□ -2.56
snR53snR53 THP3Q12049 470 aaKnown RBP-0.93□□□□□ -2.56
snR53snR53 YLR108CQ12259 485 aa-0.93□□□□□ -2.56
snR53snR53 SMY1P32364 656 aaKnown RBP-0.94□□□□□ -2.56
snR53snR53 PRP19P32523 503 aaKnown RBP-0.94□□□□□ -2.56
snR53snR53 ATG12P38316 186 aa-0.94□□□□□ -2.56
snR53snR53 OSH3P38713 996 aaKnown RBP-0.94□□□□□ -2.56
snR53snR53 GAT2P40209 560 aa-0.94□□□□□ -2.56
snR53snR53 DJP1P40564 432 aa-0.94□□□□□ -2.56
snR53snR53 GTB1Q04924 702 aa-0.94□□□□□ -2.56
Retrieved 100 of 5,963 RNA–protein pairs in 34.5 ms