RNA–Protein interactions for RNA: YPR110C

RPC40, Transcript of RNA polymerase subunit AC40, yeastyeast

Gene RPC40, Length 1,008 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPC40YPR110C FRE3Q08905 711 aa3.25□□□□□ -1.89
RPC40YPR110C SCM3Q12334 223 aa3.25□□□□□ -1.89
RPC40YPR110C YPT6Q99260 215 aa3.25□□□□□ -1.89
RPC40YPR110C MF(ALPHA)1P01149 165 aa3.24□□□□□ -1.89
RPC40YPR110C GAL4P04386 881 aa3.24□□□□□ -1.89
RPC40YPR110C DFR1P07807 211 aaKnown RBP RIP-Chip data3.24□□□□□ -1.89not detected
RPC40YPR110C RAP1P11938 827 aa3.24□□□□□ -1.89
RPC40YPR110C CBS1P14066 229 aa3.24□□□□□ -1.89
RPC40YPR110C CKA1P15790 372 aa3.24□□□□□ -1.89
RPC40YPR110C NUP1P20676 1076 aa3.24□□□□□ -1.89
RPC40YPR110C SPE2P21182 396 aa3.24□□□□□ -1.89
RPC40YPR110C OCA4P25366 362 aa3.24□□□□□ -1.89
RPC40YPR110C PUP3P25451 205 aaKnown RBP3.24□□□□□ -1.89
RPC40YPR110C SSE2P32590 693 aaKnown RBP3.24□□□□□ -1.89
RPC40YPR110C PEX2P32800 271 aa3.24□□□□□ -1.89
RPC40YPR110C MIA40P36046 403 aa3.24□□□□□ -1.89
RPC40YPR110C TSC10P38342 320 aa3.24□□□□□ -1.89
RPC40YPR110C SPO22P40511 975 aa3.24□□□□□ -1.89
RPC40YPR110C ULP2P40537 1034 aaPredicted RBP3.24□□□□□ -1.89
RPC40YPR110C ARF3P40994 183 aaRIP-Chip data3.24□□□□□ -1.89not detected
RPC40YPR110C ROK1P45818 564 aaPredicted RBP3.24□□□□□ -1.89
RPC40YPR110C FAR3P46671 204 aa3.24□□□□□ -1.89
RPC40YPR110C RPS7BP48164 190 aaKnown RBP3.24□□□□□ -1.89
RPC40YPR110C LYS20P48570 428 aaKnown RBP3.24□□□□□ -1.89
RPC40YPR110C MRPL19P53875 158 aa3.24□□□□□ -1.89
RPC40YPR110C RIM13Q03792 727 aa3.24□□□□□ -1.89
RPC40YPR110C LUC7Q07508 261 aaPredicted RBP3.24□□□□□ -1.89
RPC40YPR110C PFA4Q12006 378 aa3.24□□□□□ -1.89
RPC40YPR110C APL4Q12028 832 aa3.24□□□□□ -1.89
RPC40YPR110C LEU9Q12166 604 aaKnown RBP3.24□□□□□ -1.89
RPC40YPR110C CRC1Q12289 327 aa3.24□□□□□ -1.89
RPC40YPR110C RRI1Q12468 440 aa3.24□□□□□ -1.89
RPC40YPR110C SWR1Q05471 1514 aa3.24□□□□□ -1.89
RPC40YPR110C PEP3P27801 918 aa3.23□□□□□ -1.89
RPC40YPR110C SYN8P31377 255 aa3.23□□□□□ -1.89
RPC40YPR110C YBR144CP34215 104 aa3.23□□□□□ -1.89
RPC40YPR110C LEU5P38702 357 aa3.23□□□□□ -1.89
RPC40YPR110C BNA3P47039 444 aaKnown RBP3.23□□□□□ -1.89
RPC40YPR110C ERG26P53199 349 aaKnown RBP3.23□□□□□ -1.89
RPC40YPR110C YGR127WP53275 312 aa3.23□□□□□ -1.89
RPC40YPR110C YTP1P53584 459 aa3.23□□□□□ -1.89
RPC40YPR110C BOP3P53958 396 aa3.23□□□□□ -1.89
RPC40YPR110C UTP21Q06078 939 aaPredicted RBP3.23□□□□□ -1.89
RPC40YPR110C FMP40Q08968 688 aaPredicted RBP3.23□□□□□ -1.89
RPC40YPR110C YPT1P01123 206 aaKnown RBP3.22□□□□□ -1.89
RPC40YPR110C YER190C-BP0CX94 160 aa3.22□□□□□ -1.89
RPC40YPR110C YEL077W-AP0CX95 160 aa3.22□□□□□ -1.89
RPC40YPR110C YGR296C-BP0CX96 160 aa3.22□□□□□ -1.89
RPC40YPR110C YPL283W-BP0CX97 160 aa3.22□□□□□ -1.89
RPC40YPR110C YPR204C-AP0CX98 160 aa3.22□□□□□ -1.89
RPC40YPR110C KGD1P20967 1014 aaKnown RBP3.22□□□□□ -1.89
RPC40YPR110C PGS1P25578 521 aa3.22□□□□□ -1.89
RPC40YPR110C YEL057CP39983 233 aa3.22□□□□□ -1.89
RPC40YPR110C PSA1P41940 361 aaKnown RBP3.22□□□□□ -1.89
RPC40YPR110C IRC8P47046 822 aa3.22□□□□□ -1.89
RPC40YPR110C VID30P53076 958 aa3.22□□□□□ -1.89
RPC40YPR110C LCL3P53153 274 aa3.22□□□□□ -1.89
RPC40YPR110C NNF2P53253 936 aa3.22□□□□□ -1.89
RPC40YPR110C JJJ1P53863 590 aa3.22□□□□□ -1.89
RPC40YPR110C RPT6Q01939 405 aaKnown RBP3.22□□□□□ -1.89
RPC40YPR110C SPC19Q03954 165 aa3.22□□□□□ -1.89
RPC40YPR110C ARP10Q04549 284 aa3.22□□□□□ -1.89
RPC40YPR110C BUD7Q08754 746 aa3.22□□□□□ -1.89
RPC40YPR110C HSL1P34244 1518 aa3.21□□□□□ -1.9
RPC40YPR110C YAP1P19880 650 aaKnown RBP3.21□□□□□ -1.9
RPC40YPR110C LCB1P25045 558 aaKnown RBP3.21□□□□□ -1.9
RPC40YPR110C BUD5P25300 642 aaPredicted RBP3.21□□□□□ -1.9
RPC40YPR110C PRD1P25375 712 aa3.21□□□□□ -1.9
RPC40YPR110C ERG3P32353 365 aa3.21□□□□□ -1.9
RPC40YPR110C TIF3P34167 436 aaKnown RBP3.21□□□□□ -1.9
RPC40YPR110C YBL055CP34220 418 aaPredicted RBP3.21□□□□□ -1.9
RPC40YPR110C MTR2P34232 184 aaKnown RBP3.21□□□□□ -1.9
RPC40YPR110C MPE1P35728 441 aaKnown RBP3.21□□□□□ -1.9
RPC40YPR110C NUP133P36161 1157 aa3.21□□□□□ -1.9
RPC40YPR110C REG2P38232 338 aa3.21□□□□□ -1.9
RPC40YPR110C MET18P40469 1032 aa3.21□□□□□ -1.9
RPC40YPR110C YIL024CP40543 189 aa3.21□□□□□ -1.9
RPC40YPR110C FIN1Q03898 291 aa3.21□□□□□ -1.9
RPC40YPR110C EMI2Q04409 500 aaKnown RBP3.21□□□□□ -1.9
RPC40YPR110C DPB4Q04603 196 aaKnown RBP3.21□□□□□ -1.9
RPC40YPR110C YLR287CQ05881 355 aa3.21□□□□□ -1.9
RPC40YPR110C ADE13Q05911 482 aaKnown RBP3.21□□□□□ -1.9
RPC40YPR110C VPS38Q05919 439 aa3.21□□□□□ -1.9
RPC40YPR110C ATG26Q06321 1198 aa3.21□□□□□ -1.9
RPC40YPR110C POS5Q06892 414 aa3.21□□□□□ -1.9
RPC40YPR110C GRC3Q07845 632 aa3.21□□□□□ -1.9
RPC40YPR110C ATX2Q12067 313 aa3.21□□□□□ -1.9
RPC40YPR110C SFI1Q12369 946 aa3.21□□□□□ -1.9
RPC40YPR110C GRX6Q12438 231 aa3.21□□□□□ -1.9
RPC40YPR110C AVL9Q12500 764 aa3.21□□□□□ -1.9
RPC40YPR110C PGA3Q12746 312 aaKnown RBP3.21□□□□□ -1.9
RPC40YPR110C HSH49Q99181 213 aaPredicted RBP3.21□□□□□ -1.9
RPC40YPR110C FOB1O13329 566 aa3.2□□□□□ -1.9
RPC40YPR110C ARG81P05085 880 aa3.2□□□□□ -1.9
RPC40YPR110C MET17P06106 444 aa3.2□□□□□ -1.9
RPC40YPR110C PUT2P07275 575 aa3.2□□□□□ -1.9
RPC40YPR110C ROX1P25042 368 aa3.2□□□□□ -1.9
RPC40YPR110C BOS1P25385 244 aa3.2□□□□□ -1.9
RPC40YPR110C IMG1P25626 169 aa3.2□□□□□ -1.9
RPC40YPR110C ECM32P32644 1121 aaKnown RBP3.2□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 71.5 ms