RNA–Protein interactions for RNA: YNL082W

PMS1, Transcript of ATP-binding protein required for mismatch repair, yeast

Gene PMS1, Length 2,622 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PMS1	YNL082W	RPS10B	P46784	105 aa	Known RBP	4.24	□□□□□ -1.73
PMS1	YNL082W	KTR5	P53966	522 aa	Predicted RBP	4.24	□□□□□ -1.73
PMS1	YNL082W	MAK10	Q02197	733 aa		4.24	□□□□□ -1.73
PMS1	YNL082W	WAR1	Q03631	944 aa		4.24	□□□□□ -1.73
PMS1	YNL082W	TAP42	Q04372	366 aa		4.24	□□□□□ -1.73
PMS1	YNL082W	CYK3	Q07533	885 aa		4.24	□□□□□ -1.73
PMS1	YNL082W	RLM1	Q12224	676 aa		4.24	□□□□□ -1.73
PMS1	YNL082W	SMC6	Q12749	1114 aa		4.24	□□□□□ -1.73
PMS1	YNL082W	NUP170	P38181	1502 aa		4.23	□□□□□ -1.73
PMS1	YNL082W	STE12	P13574	688 aa		4.23	□□□□□ -1.73
PMS1	YNL082W	TPM1	P17536	199 aa	Known RBP	4.23	□□□□□ -1.73
PMS1	YNL082W	TFC3	P34111	1160 aa		4.23	□□□□□ -1.73
PMS1	YNL082W	GLG1	P36143	616 aa		4.23	□□□□□ -1.73
PMS1	YNL082W	MTG2	P38860	518 aa		4.23	□□□□□ -1.73
PMS1	YNL082W	SDS3	P40505	327 aa		4.23	□□□□□ -1.73
PMS1	YNL082W	APT1	P49435	187 aa	Known RBP	4.23	□□□□□ -1.73
PMS1	YNL082W	VPS73	P53142	486 aa	Known RBP	4.23	□□□□□ -1.73
PMS1	YNL082W	FCP1	Q03254	732 aa		4.23	□□□□□ -1.73
PMS1	YNL082W	GIS1	Q03833	894 aa		4.23	□□□□□ -1.73
PMS1	YNL082W	RPS10A	Q08745	105 aa	Predicted RBP	4.23	□□□□□ -1.73
PMS1	YNL082W	YPL191C	Q08930	360 aa		4.23	□□□□□ -1.73
PMS1	YNL082W	TGS1	Q12052	315 aa		4.23	□□□□□ -1.73
PMS1	YNL082W	EST1	P17214	699 aa	Predicted RBP	4.23	□□□□□ -1.73
PMS1	YNL082W	SWC3	P31376	625 aa		4.23	□□□□□ -1.73
PMS1	YNL082W	TCD2	P36101	447 aa	Known RBP	4.23	□□□□□ -1.73
PMS1	YNL082W	THI6	P41835	540 aa		4.23	□□□□□ -1.73
PMS1	YNL082W	SAE2	P46946	345 aa		4.23	□□□□□ -1.73
PMS1	YNL082W	ERB1	Q04660	807 aa	Known RBP	4.23	□□□□□ -1.73
PMS1	YNL082W	BUD14	P27637	709 aa		4.22	□□□□□ -1.73
PMS1	YNL082W	YMC1	P32331	307 aa		4.22	□□□□□ -1.73
PMS1	YNL082W	STB6	P36085	766 aa		4.22	□□□□□ -1.73
PMS1	YNL082W	IMD2	P38697	523 aa	Known RBP	4.22	□□□□□ -1.73
PMS1	YNL082W	UTP9	P38882	575 aa	Known RBP	4.22	□□□□□ -1.73
PMS1	YNL082W	SEC31	P38968	1273 aa	Known RBP	4.22	□□□□□ -1.73
PMS1	YNL082W	YJL068C	P40363	299 aa		4.22	□□□□□ -1.73
PMS1	YNL082W	RPN11	P43588	306 aa	Known RBP	4.22	□□□□□ -1.73
PMS1	YNL082W	IMD3	P50095	523 aa	Known RBP	4.22	□□□□□ -1.73
PMS1	YNL082W	STR3	P53101	465 aa	Known RBP	4.22	□□□□□ -1.73
PMS1	YNL082W	YDL073W	Q07454	984 aa		4.22	□□□□□ -1.73
PMS1	YNL082W	VTH1	P40438	1549 aa		4.22	□□□□□ -1.73
PMS1	YNL082W	VTH2	P40890	1549 aa		4.22	□□□□□ -1.73
PMS1	YNL082W	PDR12	Q02785	1511 aa		4.22	□□□□□ -1.73
PMS1	YNL082W	GAL80	P04387	435 aa		4.22	□□□□□ -1.73
PMS1	YNL082W	RPL7A	P05737	244 aa	Known RBP	4.22	□□□□□ -1.73
PMS1	YNL082W	RPF2	P36160	344 aa	Known RBP	4.22	□□□□□ -1.73
PMS1	YNL082W	ADE17	P38009	592 aa	Known RBP	4.22	□□□□□ -1.73
PMS1	YNL082W	KEL1	P38853	1164 aa	Known RBP	4.22	□□□□□ -1.73
PMS1	YNL082W	TCB2	P48231	1178 aa		4.22	□□□□□ -1.73
PMS1	YNL082W	IMD4	P50094	524 aa	Known RBP	4.22	□□□□□ -1.73
PMS1	YNL082W	CPR8	P53728	308 aa		4.22	□□□□□ -1.73
PMS1	YNL082W	CRT10	Q08226	957 aa		4.22	□□□□□ -1.73
PMS1	YNL082W	TCO89	Q08921	799 aa		4.22	□□□□□ -1.73
PMS1	YNL082W	RPL7B	Q12213	244 aa	Known RBP	4.22	□□□□□ -1.73
PMS1	YNL082W	MYO4	P32492	1471 aa		4.22	□□□□□ -1.73
PMS1	YNL082W	YER145C-A	A0A023PYF4	145 aa		4.21	□□□□□ -1.74
PMS1	YNL082W	PMT1	P33775	817 aa		4.21	□□□□□ -1.74
PMS1	YNL082W	SNU114	P36048	1008 aa	Known RBP	4.21	□□□□□ -1.74
PMS1	YNL082W	DRN1	P53255	507 aa	Known RBP	4.21	□□□□□ -1.74
PMS1	YNL082W	EFM6	P53970	246 aa		4.21	□□□□□ -1.74
PMS1	YNL082W	SPP41	P38904	1435 aa		4.21	□□□□□ -1.74
PMS1	YNL082W	DFR1	P07807	211 aa	Known RBP RIP-Chip data	4.21	□□□□□ -1.74	not detected
PMS1	YNL082W	PUP3	P25451	205 aa	Known RBP	4.21	□□□□□ -1.74
PMS1	YNL082W	YIH1	P25637	258 aa		4.21	□□□□□ -1.74
PMS1	YNL082W	MRE11	P32829	692 aa		4.21	□□□□□ -1.74
PMS1	YNL082W	SEC66	P33754	206 aa		4.21	□□□□□ -1.74
PMS1	YNL082W	SRP72	P38688	640 aa	Known RBP	4.21	□□□□□ -1.74
PMS1	YNL082W	FUN12	P39730	1002 aa	Known RBP	4.21	□□□□□ -1.74
PMS1	YNL082W	UBP5	P39944	805 aa		4.21	□□□□□ -1.74
PMS1	YNL082W	PET130	P47065	347 aa		4.21	□□□□□ -1.74
PMS1	YNL082W	YGR016W	P53209	190 aa		4.21	□□□□□ -1.74
PMS1	YNL082W	YNL144C	P53907	740 aa		4.21	□□□□□ -1.74
PMS1	YNL082W	COQ9	Q05779	260 aa		4.21	□□□□□ -1.74
PMS1	YNL082W	VPS38	Q05919	439 aa		4.21	□□□□□ -1.74
PMS1	YNL082W	SGV1	P23293	657 aa	Known RBP	4.2	□□□□□ -1.74
PMS1	YNL082W	RRP7	P25368	297 aa	Predicted RBP	4.2	□□□□□ -1.74
PMS1	YNL082W	PTC6	P25646	442 aa		4.2	□□□□□ -1.74
PMS1	YNL082W	TRM2	P33753	639 aa		4.2	□□□□□ -1.74
PMS1	YNL082W	REG2	P38232	338 aa		4.2	□□□□□ -1.74
PMS1	YNL082W	ELO1	P39540	310 aa		4.2	□□□□□ -1.74
PMS1	YNL082W	YDR286C	Q05530	114 aa		4.2	□□□□□ -1.74
PMS1	YNL082W	NCE102	Q12207	173 aa	RIP-Chip data	4.2	□□□□□ -1.74	not detected
PMS1	YNL082W	MDM20	Q12387	796 aa	Known RBP	4.2	□□□□□ -1.74
PMS1	YNL082W	TPK2	P06245	380 aa		4.2	□□□□□ -1.74
PMS1	YNL082W	AQY1	P0CD91	305 aa		4.2	□□□□□ -1.74
PMS1	YNL082W	APN1	P22936	367 aa		4.2	□□□□□ -1.74
PMS1	YNL082W	PRD1	P25375	712 aa		4.2	□□□□□ -1.74
PMS1	YNL082W	AAD3	P25612	363 aa		4.2	□□□□□ -1.74
PMS1	YNL082W	ERV1	P27882	189 aa		4.2	□□□□□ -1.74
PMS1	YNL082W	SIP1	P32578	815 aa		4.2	□□□□□ -1.74
PMS1	YNL082W	VID24	P38263	362 aa		4.2	□□□□□ -1.74
PMS1	YNL082W	COG2	P53271	262 aa		4.2	□□□□□ -1.74
PMS1	YNL082W	RRD2	Q12461	358 aa		4.2	□□□□□ -1.74
PMS1	YNL082W	MLP2	P40457	1679 aa		4.19	□□□□□ -1.74
PMS1	YNL082W	PRE8	P23639	250 aa		4.19	□□□□□ -1.74
PMS1	YNL082W	SSE2	P32590	693 aa	Known RBP	4.19	□□□□□ -1.74
PMS1	YNL082W	PXA2	P34230	853 aa		4.19	□□□□□ -1.74
PMS1	YNL082W	LNP1	P38878	278 aa		4.19	□□□□□ -1.74
PMS1	YNL082W	BUR6	P40096	142 aa		4.19	□□□□□ -1.74
PMS1	YNL082W	DCP2	P53550	970 aa	Known RBP	4.19	□□□□□ -1.74
PMS1	YNL082W	AHA1	Q12449	350 aa	Known RBP	4.19	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 28.9 ms