RNA–Protein interactions for RNA: YMR197C

VTI1, Transcript of Protein involved in cis-Golgi membrane traffic, yeastyeast

Gene VTI1, Length 654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VTI1YMR197C CDC16P09798 840 aa2.39□□□□□ -2.03
VTI1YMR197C RED1P14291 827 aa2.39□□□□□ -2.03
VTI1YMR197C POL3P15436 1097 aa2.39□□□□□ -2.03
VTI1YMR197C PDA1P16387 420 aaKnown RBP2.39□□□□□ -2.03
VTI1YMR197C NCP1P16603 691 aaKnown RBP2.39□□□□□ -2.03
VTI1YMR197C SPO16P17122 198 aa2.39□□□□□ -2.03
VTI1YMR197C MCM3P24279 971 aaKnown RBP2.39□□□□□ -2.03
VTI1YMR197C PRO3P32263 286 aaKnown RBP2.39□□□□□ -2.03
VTI1YMR197C NPL6P32832 435 aa2.39□□□□□ -2.03
VTI1YMR197C YKL100CP34248 587 aa2.39□□□□□ -2.03
VTI1YMR197C TEF4P36008 412 aaKnown RBP2.39□□□□□ -2.03
VTI1YMR197C YPK3P38070 525 aa2.39□□□□□ -2.03
VTI1YMR197C RIM2P38127 377 aa2.39□□□□□ -2.03
VTI1YMR197C NPR3P38742 1146 aa2.39□□□□□ -2.03
VTI1YMR197C STT3P39007 718 aaKnown RBP2.39□□□□□ -2.03
VTI1YMR197C BUD16P39988 312 aa2.39□□□□□ -2.03
VTI1YMR197C ARF3P40994 183 aaRIP-Chip data2.39□□□□□ -2.03not detected
VTI1YMR197C CTF18P49956 741 aa2.39□□□□□ -2.03
VTI1YMR197C YGR016WP53209 190 aa2.39□□□□□ -2.03
VTI1YMR197C BTN2P53286 410 aa2.39□□□□□ -2.03
VTI1YMR197C IWR1Q07532 353 aaPredicted RBP2.39□□□□□ -2.03
VTI1YMR197C DAP1Q12091 152 aa2.39□□□□□ -2.03
VTI1YMR197C SFI1Q12369 946 aa2.39□□□□□ -2.03
VTI1YMR197C YBR298C-AQ8TGK4 73 aa2.39□□□□□ -2.03
VTI1YMR197C YSP3P25036 478 aa2.38□□□□□ -2.03
VTI1YMR197C STE50P25344 346 aa2.38□□□□□ -2.03
VTI1YMR197C KRR1P25586 316 aaPredicted RBP2.38□□□□□ -2.03
VTI1YMR197C CPR3P25719 182 aa2.38□□□□□ -2.03
VTI1YMR197C BRF1P29056 596 aa2.38□□□□□ -2.03
VTI1YMR197C CNS1P33313 385 aa2.38□□□□□ -2.03
VTI1YMR197C BYE1P36106 594 aa2.38□□□□□ -2.03
VTI1YMR197C ADE17P38009 592 aaKnown RBP2.38□□□□□ -2.03
VTI1YMR197C IFA38P38286 347 aa2.38□□□□□ -2.03
VTI1YMR197C UTP9P38882 575 aaKnown RBP2.38□□□□□ -2.03
VTI1YMR197C JEM1P40358 645 aa2.38□□□□□ -2.03
VTI1YMR197C DJP1P40564 432 aa2.38□□□□□ -2.03
VTI1YMR197C AXL1P40851 1208 aa2.38□□□□□ -2.03
VTI1YMR197C LYS14P40971 790 aa2.38□□□□□ -2.03
VTI1YMR197C ATP22P50273 684 aaPredicted RBP2.38□□□□□ -2.03
VTI1YMR197C RRT6P53117 311 aaPredicted RBP2.38□□□□□ -2.03
VTI1YMR197C SGF73P53165 657 aa2.38□□□□□ -2.03
VTI1YMR197C ATG21Q02887 496 aa2.38□□□□□ -2.03
VTI1YMR197C MTG1Q03151 367 aaPredicted RBP2.38□□□□□ -2.03
VTI1YMR197C CTL1Q03220 320 aaKnown RBP2.38□□□□□ -2.03
VTI1YMR197C PFA5Q03289 374 aa2.38□□□□□ -2.03
VTI1YMR197C EKI1Q03764 534 aa2.38□□□□□ -2.03
VTI1YMR197C MFB1Q04922 465 aa2.38□□□□□ -2.03
VTI1YMR197C RSF1Q05043 376 aa2.38□□□□□ -2.03
VTI1YMR197C PSR1Q07800 427 aa2.38□□□□□ -2.03
VTI1YMR197C TRM8Q12009 286 aa2.38□□□□□ -2.03
VTI1YMR197C SUL2Q12325 893 aa2.38□□□□□ -2.03
VTI1YMR197C SKM1Q12469 655 aa2.38□□□□□ -2.03
VTI1YMR197C GCN4P03069 281 aa2.37□□□□□ -2.03
VTI1YMR197C CHO1P08456 276 aa2.37□□□□□ -2.03
VTI1YMR197C PET122P10355 254 aa2.37□□□□□ -2.03
VTI1YMR197C CKA1P15790 372 aa2.37□□□□□ -2.03
VTI1YMR197C PDX1P16451 410 aa2.37□□□□□ -2.03
VTI1YMR197C SIR1P21691 654 aa2.37□□□□□ -2.03
VTI1YMR197C RIT1P23796 513 aa2.37□□□□□ -2.03
VTI1YMR197C RPC53P25441 422 aa2.37□□□□□ -2.03
VTI1YMR197C SGF29P25554 259 aa2.37□□□□□ -2.03
VTI1YMR197C CBF2P32504 956 aa2.37□□□□□ -2.03
VTI1YMR197C UBP13P38187 747 aa2.37□□□□□ -2.03
VTI1YMR197C YBR138CP38277 524 aa2.37□□□□□ -2.03
VTI1YMR197C YBR225WP38321 900 aa2.37□□□□□ -2.03
VTI1YMR197C LRP1P38801 184 aaKnown RBP2.37□□□□□ -2.03
VTI1YMR197C YIR014WP40570 242 aa2.37□□□□□ -2.03
VTI1YMR197C IAH1P41734 238 aa2.37□□□□□ -2.03
VTI1YMR197C GPI8P49018 411 aa2.37□□□□□ -2.03
VTI1YMR197C BSC5P53755 489 aa2.37□□□□□ -2.03
VTI1YMR197C ARP10Q04549 284 aa2.37□□□□□ -2.03
VTI1YMR197C SNO4Q04902 237 aa2.37□□□□□ -2.03
VTI1YMR197C STP3Q05937 343 aa2.37□□□□□ -2.03
VTI1YMR197C TFC6Q06339 672 aa2.37□□□□□ -2.03
VTI1YMR197C HSP33Q08914 237 aaKnown RBP2.37□□□□□ -2.03
VTI1YMR197C HSP32Q08992 237 aa2.37□□□□□ -2.03
VTI1YMR197C HUA2Q12134 243 aa2.37□□□□□ -2.03
VTI1YMR197C NBP2Q12163 236 aa2.37□□□□□ -2.03
VTI1YMR197C ARG3P05150 338 aa2.36□□□□□ -2.03
VTI1YMR197C TPK1P06244 397 aa2.36□□□□□ -2.03
VTI1YMR197C ADE3P07245 946 aaKnown RBP2.36□□□□□ -2.03
VTI1YMR197C NAT1P12945 854 aaKnown RBP2.36□□□□□ -2.03
VTI1YMR197C TPM1P17536 199 aaKnown RBP2.36□□□□□ -2.03
VTI1YMR197C OLE1P21147 510 aaKnown RBP2.36□□□□□ -2.03
VTI1YMR197C SWI4P25302 1093 aaKnown RBP2.36□□□□□ -2.03
VTI1YMR197C SAC6P32599 642 aaKnown RBP2.36□□□□□ -2.03
VTI1YMR197C RXT2P38255 430 aa2.36□□□□□ -2.03
VTI1YMR197C YHR218WP38899 603 aa2.36□□□□□ -2.03
VTI1YMR197C PES4P39684 611 aa2.36□□□□□ -2.03
VTI1YMR197C RTS2P40962 232 aa2.36□□□□□ -2.03
VTI1YMR197C RMD8P43620 662 aa2.36□□□□□ -2.03
VTI1YMR197C RPT6Q01939 405 aaKnown RBP2.36□□□□□ -2.03
VTI1YMR197C YMR155WQ03795 547 aa2.36□□□□□ -2.03
VTI1YMR197C ATG23Q06671 453 aa2.36□□□□□ -2.03
VTI1YMR197C SWA2Q06677 668 aa2.36□□□□□ -2.03
VTI1YMR197C ISA2Q12425 185 aa2.36□□□□□ -2.03
VTI1YMR197C CSR2Q12734 1121 aa2.36□□□□□ -2.03
VTI1YMR197C EDE1P34216 1381 aa2.36□□□□□ -2.03
VTI1YMR197C YLR302CO13544 120 aa2.35□□□□□ -2.03
VTI1YMR197C MET17P06106 444 aa2.35□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 22.9 ms