RNA–Protein interactions for RNA: YMR128W

ECM16, Transcript of Essential DEAH-box ATP-dependent RNA helicase specific to U3 snoRNP, yeastyeast

Gene ECM16, Length 3,804 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ECM16YMR128W RCN1P36054 211 aa3.81□□□□□ -1.8
ECM16YMR128W AGP2P38090 596 aa3.81□□□□□ -1.8
ECM16YMR128W YHI9P38765 294 aa3.81□□□□□ -1.8
ECM16YMR128W GDH3P39708 457 aa3.81□□□□□ -1.8
ECM16YMR128W SYG1P40528 902 aa3.81□□□□□ -1.8
ECM16YMR128W ERR3P42222 437 aa3.81□□□□□ -1.8
ECM16YMR128W RRT5P43607 289 aa3.81□□□□□ -1.8
ECM16YMR128W GUS1P46655 708 aaKnown RBP RIP-Chip data3.81□□□□□ -1.8not detected
ECM16YMR128W RTS3P53289 263 aa3.81□□□□□ -1.8
ECM16YMR128W SLG1P54867 378 aa3.81□□□□□ -1.8
ECM16YMR128W CEG1Q01159 459 aaPredicted RBP3.81□□□□□ -1.8
ECM16YMR128W YMR074CQ04773 145 aa3.81□□□□□ -1.8
ECM16YMR128W YPL247CQ12523 523 aa3.81□□□□□ -1.8
ECM16YMR128W GLT1Q12680 2145 aaKnown RBP3.81□□□□□ -1.8
ECM16YMR128W CAR1P00812 333 aaKnown RBP3.8□□□□□ -1.8
ECM16YMR128W GAL10P04397 699 aa3.8□□□□□ -1.8
ECM16YMR128W GPA2P10823 449 aa3.8□□□□□ -1.8
ECM16YMR128W PMA2P19657 947 aa3.8□□□□□ -1.8
ECM16YMR128W CAD1P24813 409 aaKnown RBP3.8□□□□□ -1.8
ECM16YMR128W LYP1P32487 611 aa3.8□□□□□ -1.8
ECM16YMR128W VHR1P40522 640 aa3.8□□□□□ -1.8
ECM16YMR128W EMC2P47133 292 aaKnown RBP3.8□□□□□ -1.8
ECM16YMR128W VMA10P48836 114 aaKnown RBP3.8□□□□□ -1.8
ECM16YMR128W YGR127WP53275 312 aa3.8□□□□□ -1.8
ECM16YMR128W YNL058CP53947 316 aa3.8□□□□□ -1.8
ECM16YMR128W DTD1Q07648 150 aaKnown RBP3.8□□□□□ -1.8
ECM16YMR128W AIM39Q08223 395 aa3.8□□□□□ -1.8
ECM16YMR128W PRC1P00729 532 aa3.8□□□□□ -1.8
ECM16YMR128W HPR1P17629 752 aaKnown RBP3.8□□□□□ -1.8
ECM16YMR128W YCL068CP25593 260 aa3.8□□□□□ -1.8
ECM16YMR128W PHA2P32452 334 aa3.8□□□□□ -1.8
ECM16YMR128W REG2P38232 338 aa3.8□□□□□ -1.8
ECM16YMR128W YHR112CP38716 378 aa3.8□□□□□ -1.8
ECM16YMR128W RIM4P38741 713 aa3.8□□□□□ -1.8
ECM16YMR128W UTP9P38882 575 aaKnown RBP3.8□□□□□ -1.8
ECM16YMR128W EAF5P39995 279 aa3.8□□□□□ -1.8
ECM16YMR128W NOP19P53317 196 aaPredicted RBP3.8□□□□□ -1.8
ECM16YMR128W CUS2P53830 285 aaPredicted RBP3.8□□□□□ -1.8
ECM16YMR128W SGO1Q08490 590 aa3.8□□□□□ -1.8
ECM16YMR128W ESA1Q08649 445 aa3.8□□□□□ -1.8
ECM16YMR128W UBR1P19812 1950 aa3.8□□□□□ -1.8
ECM16YMR128W ASP3-2P0CX77 362 aa3.8□□□□□ -1.8
ECM16YMR128W ASP3-3P0CX78 362 aa3.8□□□□□ -1.8
ECM16YMR128W ASP3-4P0CX79 362 aa3.8□□□□□ -1.8
ECM16YMR128W ASP3-1P0CZ17 362 aa3.8□□□□□ -1.8
ECM16YMR128W GLN4P13188 809 aaKnown RBP3.8□□□□□ -1.8
ECM16YMR128W PRR1P28708 518 aa3.8□□□□□ -1.8
ECM16YMR128W RPN2P32565 945 aaKnown RBP3.8□□□□□ -1.8
ECM16YMR128W UTR4P32626 227 aa3.8□□□□□ -1.8
ECM16YMR128W SRB2P34162 210 aa3.8□□□□□ -1.8
ECM16YMR128W YBL029WP38201 376 aa3.8□□□□□ -1.8
ECM16YMR128W PNT1P38969 423 aa3.8□□□□□ -1.8
ECM16YMR128W ACO2P39533 789 aa3.8□□□□□ -1.8
ECM16YMR128W FIR1P40020 876 aa3.8□□□□□ -1.8
ECM16YMR128W SCS3P53012 380 aa3.8□□□□□ -1.8
ECM16YMR128W RMR1P53060 241 aa3.8□□□□□ -1.8
ECM16YMR128W MNP1P53163 194 aaPredicted RBP3.8□□□□□ -1.8
ECM16YMR128W GET1P53192 235 aa3.8□□□□□ -1.8
ECM16YMR128W RCF2P53721 224 aa3.8□□□□□ -1.8
ECM16YMR128W PEX13P80667 386 aa3.8□□□□□ -1.8
ECM16YMR128W RCF1Q03713 159 aa3.8□□□□□ -1.8
ECM16YMR128W YLL056CQ12177 298 aa3.8□□□□□ -1.8
ECM16YMR128W COX4P04037 155 aa3.79□□□□□ -1.8
ECM16YMR128W PET122P10355 254 aa3.79□□□□□ -1.8
ECM16YMR128W UGA1P17649 471 aa3.79□□□□□ -1.8
ECM16YMR128W UBA1P22515 1024 aaKnown RBP3.79□□□□□ -1.8
ECM16YMR128W POL4P25615 582 aa3.79□□□□□ -1.8
ECM16YMR128W RPS5P26783 225 aaKnown RBP3.79□□□□□ -1.8
ECM16YMR128W TOM20P35180 183 aa3.79□□□□□ -1.8
ECM16YMR128W OCT1P35999 772 aa3.79□□□□□ -1.8
ECM16YMR128W EXO84P38261 753 aa3.79□□□□□ -1.8
ECM16YMR128W PPE1P38796 400 aa3.79□□□□□ -1.8
ECM16YMR128W ERP2P39704 215 aa3.79□□□□□ -1.8
ECM16YMR128W YEL025CP39991 1188 aa3.79□□□□□ -1.8
ECM16YMR128W ATM1P40416 690 aa3.79□□□□□ -1.8
ECM16YMR128W SWP82P43554 623 aa3.79□□□□□ -1.8
ECM16YMR128W GUF1P46943 645 aa3.79□□□□□ -1.8
ECM16YMR128W RPS7BP48164 190 aaKnown RBP3.79□□□□□ -1.8
ECM16YMR128W GPI1P53306 609 aa3.79□□□□□ -1.8
ECM16YMR128W YNL033WP53964 284 aa3.79□□□□□ -1.8
ECM16YMR128W YNL019CP53975 284 aa3.79□□□□□ -1.8
ECM16YMR128W SMC5Q08204 1093 aa3.79□□□□□ -1.8
ECM16YMR128W IZH4Q99393 312 aa3.79□□□□□ -1.8
ECM16YMR128W ATP6P00854 259 aa3.79□□□□□ -1.8
ECM16YMR128W CBP1P07252 654 aa3.79□□□□□ -1.8
ECM16YMR128W PUT4P15380 627 aa3.79□□□□□ -1.8
ECM16YMR128W SEC15P22224 910 aa3.79□□□□□ -1.8
ECM16YMR128W PCL2P25693 308 aa3.79□□□□□ -1.8
ECM16YMR128W PMI40P29952 429 aaKnown RBP3.79□□□□□ -1.8
ECM16YMR128W SKG6P32900 734 aaPredicted RBP3.79□□□□□ -1.8
ECM16YMR128W MUM2P38236 366 aa3.79□□□□□ -1.8
ECM16YMR128W IES5P40060 125 aa3.79□□□□□ -1.8
ECM16YMR128W YGR283CP53336 341 aaPredicted RBP3.79□□□□□ -1.8
ECM16YMR128W YMR321CQ04898 105 aa3.79□□□□□ -1.8
ECM16YMR128W YLL058WQ12198 575 aa3.79□□□□□ -1.8
ECM16YMR128W ERP3Q12403 225 aa3.79□□□□□ -1.8
ECM16YMR128W CHS1P08004 1131 aa3.79□□□□□ -1.8
ECM16YMR128W HSC82P15108 705 aaKnown RBP3.79□□□□□ -1.8
ECM16YMR128W SIS1P25294 352 aaKnown RBP3.79□□□□□ -1.8
ECM16YMR128W VBA3P25594 458 aa3.79□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms