RNA–Protein interactions for RNA: YMR078C

CTF18, Transcript of Subunit of a complex with Ctf8p, yeast

Gene CTF18, Length 2,226 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CTF18	YMR078C	YEL057C	P39983	233 aa		5.25	□□□□□ -1.57
CTF18	YMR078C	ULP2	P40537	1034 aa	Predicted RBP	5.25	□□□□□ -1.57
CTF18	YMR078C	YIL024C	P40543	189 aa		5.25	□□□□□ -1.57
CTF18	YMR078C	HXT9	P40885	567 aa		5.25	□□□□□ -1.57
CTF18	YMR078C	YMR178W	Q03219	274 aa	Known RBP	5.25	□□□□□ -1.57
CTF18	YMR078C	ADE13	Q05911	482 aa	Known RBP	5.25	□□□□□ -1.57
CTF18	YMR078C	TAH18	Q12181	623 aa		5.25	□□□□□ -1.57
CTF18	YMR078C	ARG3	P05150	338 aa		5.24	□□□□□ -1.57
CTF18	YMR078C	ADH7	P25377	361 aa		5.24	□□□□□ -1.57
CTF18	YMR078C	ECM32	P32644	1121 aa	Known RBP	5.24	□□□□□ -1.57
CTF18	YMR078C	LYS20	P48570	428 aa	Known RBP	5.24	□□□□□ -1.57
CTF18	YMR078C	TIF3	P34167	436 aa	Known RBP	5.24	□□□□□ -1.57
CTF18	YMR078C	TSC10	P38342	320 aa		5.24	□□□□□ -1.57
CTF18	YMR078C	LEU5	P38702	357 aa		5.24	□□□□□ -1.57
CTF18	YMR078C	ANS1	P38832	159 aa		5.24	□□□□□ -1.57
CTF18	YMR078C	XBP1	P40489	647 aa		5.24	□□□□□ -1.57
CTF18	YMR078C	CFD1	P40558	293 aa		5.24	□□□□□ -1.57
CTF18	YMR078C	SMC3	P47037	1230 aa		5.24	□□□□□ -1.57
CTF18	YMR078C	BNA3	P47039	444 aa	Known RBP	5.24	□□□□□ -1.57
CTF18	YMR078C	NNF2	P53253	936 aa		5.24	□□□□□ -1.57
CTF18	YMR078C	MRPL19	P53875	158 aa		5.24	□□□□□ -1.57
CTF18	YMR078C	ERG13	P54839	491 aa	Known RBP	5.24	□□□□□ -1.57
CTF18	YMR078C	CAC2	Q04199	468 aa		5.24	□□□□□ -1.57
CTF18	YMR078C	PUP3	P25451	205 aa	Known RBP	5.23	□□□□□ -1.57
CTF18	YMR078C	MPE1	P35728	441 aa	Known RBP	5.23	□□□□□ -1.57
CTF18	YMR078C	APT1	P49435	187 aa	Known RBP	5.23	□□□□□ -1.57
CTF18	YMR078C	SWF1	Q04629	336 aa		5.23	□□□□□ -1.57
CTF18	YMR078C	PGA3	Q12746	312 aa	Known RBP	5.23	□□□□□ -1.57
CTF18	YMR078C	PEP3	P27801	918 aa		5.23	□□□□□ -1.57
CTF18	YMR078C	SGM1	P47166	707 aa		5.23	□□□□□ -1.57
CTF18	YMR078C	SRB7	P47822	140 aa		5.23	□□□□□ -1.57
CTF18	YMR078C	BUD22	Q04347	519 aa	Known RBP	5.23	□□□□□ -1.57
CTF18	YMR078C	UTP21	Q06078	939 aa	Predicted RBP	5.23	□□□□□ -1.57
CTF18	YMR078C	YJR112W-A	Q3E743	109 aa		5.23	□□□□□ -1.57
CTF18	YMR078C	MDM10	P18409	493 aa		5.22	□□□□□ -1.57
CTF18	YMR078C	YKL050C	P35736	922 aa		5.22	□□□□□ -1.57
CTF18	YMR078C	MIA40	P36046	403 aa		5.22	□□□□□ -1.57
CTF18	YMR078C	FLO5	P38894	1075 aa		5.22	□□□□□ -1.57
CTF18	YMR078C	MAF1	P41910	395 aa		5.22	□□□□□ -1.57
CTF18	YMR078C	HOS2	P53096	452 aa	Predicted RBP	5.22	□□□□□ -1.57
CTF18	YMR078C	RPL15B	P54780	204 aa	Predicted RBP	5.22	□□□□□ -1.57
CTF18	YMR078C	MSC1	Q03104	513 aa		5.22	□□□□□ -1.57
CTF18	YMR078C	DPB4	Q04603	196 aa	Known RBP	5.22	□□□□□ -1.57
CTF18	YMR078C	EST1	P17214	699 aa	Predicted RBP	5.21	□□□□□ -1.57
CTF18	YMR078C	LCB1	P25045	558 aa	Known RBP	5.21	□□□□□ -1.57
CTF18	YMR078C	SSE2	P32590	693 aa	Known RBP	5.21	□□□□□ -1.57
CTF18	YMR078C	GAT1	P43574	510 aa		5.21	□□□□□ -1.57
CTF18	YMR078C	IRC8	P47046	822 aa		5.21	□□□□□ -1.57
CTF18	YMR078C	YNL144C	P53907	740 aa		5.21	□□□□□ -1.57
CTF18	YMR078C	ECM22	Q05958	814 aa	Predicted RBP	5.21	□□□□□ -1.57
CTF18	YMR078C	LEU9	Q12166	604 aa	Known RBP	5.21	□□□□□ -1.57
CTF18	YMR078C	MET17	P06106	444 aa		5.21	□□□□□ -1.58
CTF18	YMR078C	NUP133	P36161	1157 aa		5.21	□□□□□ -1.58
CTF18	YMR078C	UBP8	P50102	471 aa		5.21	□□□□□ -1.58
CTF18	YMR078C	TEN1	Q07921	160 aa		5.21	□□□□□ -1.58
CTF18	YMR078C	MF(ALPHA)1	P01149	165 aa		5.2	□□□□□ -1.58
CTF18	YMR078C	MRP13	P12686	339 aa		5.2	□□□□□ -1.58
CTF18	YMR078C	YIL060W	P40519	144 aa		5.2	□□□□□ -1.58
CTF18	YMR078C	MET28	P40573	187 aa		5.2	□□□□□ -1.58
CTF18	YMR078C	PSA1	P41940	361 aa	Known RBP	5.2	□□□□□ -1.58
CTF18	YMR078C	VTC3	Q02725	835 aa		5.2	□□□□□ -1.58
CTF18	YMR078C	ATG26	Q06321	1198 aa		5.2	□□□□□ -1.58
CTF18	YMR078C	GRC3	Q07845	632 aa		5.2	□□□□□ -1.58
CTF18	YMR078C	FMP40	Q08968	688 aa	Predicted RBP	5.2	□□□□□ -1.58
CTF18	YMR078C	APL4	Q12028	832 aa		5.2	□□□□□ -1.58
CTF18	YMR078C	SGS1	P35187	1447 aa		5.2	□□□□□ -1.58
CTF18	YMR078C	OCA4	P25366	362 aa		5.2	□□□□□ -1.58
CTF18	YMR078C	YBR144C	P34215	104 aa		5.2	□□□□□ -1.58
CTF18	YMR078C	REG2	P38232	338 aa		5.2	□□□□□ -1.58
CTF18	YMR078C	RFC1	P38630	861 aa	Known RBP	5.2	□□□□□ -1.58
CTF18	YMR078C	LTP1	P40347	161 aa		5.2	□□□□□ -1.58
CTF18	YMR078C	YPT11	P48559	417 aa		5.2	□□□□□ -1.58
CTF18	YMR078C	PKP2	P53170	491 aa		5.2	□□□□□ -1.58
CTF18	YMR078C	RPT6	Q01939	405 aa	Known RBP	5.2	□□□□□ -1.58
CTF18	YMR078C	YLR112W	Q12130	139 aa		5.2	□□□□□ -1.58
CTF18	YMR078C	CKA1	P15790	372 aa		5.19	□□□□□ -1.58
CTF18	YMR078C	ROX1	P25042	368 aa		5.19	□□□□□ -1.58
CTF18	YMR078C	YBL055C	P34220	418 aa	Predicted RBP	5.19	□□□□□ -1.58
CTF18	YMR078C	TOM71	P38825	639 aa	Known RBP	5.19	□□□□□ -1.58
CTF18	YMR078C	SGF73	P53165	657 aa		5.19	□□□□□ -1.58
CTF18	YMR078C	IMG1	P25626	169 aa		5.19	□□□□□ -1.58
CTF18	YMR078C	AFG3	P39925	761 aa		5.19	□□□□□ -1.58
CTF18	YMR078C	IMD4	P50094	524 aa	Known RBP	5.19	□□□□□ -1.58
CTF18	YMR078C	ERG26	P53199	349 aa	Known RBP	5.19	□□□□□ -1.58
CTF18	YMR078C	EMI2	Q04409	500 aa	Known RBP	5.19	□□□□□ -1.58
CTF18	YMR078C	SPE2	P21182	396 aa		5.18	□□□□□ -1.58
CTF18	YMR078C	TCD2	P36101	447 aa	Known RBP	5.18	□□□□□ -1.58
CTF18	YMR078C	JNM1	P36224	373 aa		5.18	□□□□□ -1.58
CTF18	YMR078C	PYK2	P52489	506 aa	Known RBP	5.18	□□□□□ -1.58
CTF18	YMR078C	RLM1	Q12224	676 aa		5.18	□□□□□ -1.58
CTF18	YMR078C	YCP4	P25349	247 aa	Known RBP	5.17	□□□□□ -1.58
CTF18	YMR078C	GAC1	P28006	793 aa		5.17	□□□□□ -1.58
CTF18	YMR078C	ERG3	P32353	365 aa		5.17	□□□□□ -1.58
CTF18	YMR078C	WBP1	P33767	430 aa	Known RBP	5.17	□□□□□ -1.58
CTF18	YMR078C	UBA4	P38820	440 aa		5.17	□□□□□ -1.58
CTF18	YMR078C	FAR3	P46671	204 aa		5.17	□□□□□ -1.58
CTF18	YMR078C	YGR066C	P53242	292 aa		5.17	□□□□□ -1.58
CTF18	YMR078C	GRX6	Q12438	231 aa		5.17	□□□□□ -1.58
CTF18	YMR078C	HSH49	Q99181	213 aa	Predicted RBP	5.17	□□□□□ -1.58
CTF18	YMR078C	PUT2	P07275	575 aa		5.17	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 104.8 ms