RNA–Protein interactions for RNA: YLR430W

SEN1, Transcript of Presumed helicase and subunit of the Nrd1 complex (Nrd1p-Nab3p-Sen1p), yeastyeast

Gene SEN1, Length 6,696 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEN1YLR430W KRE6P32486 720 aa4.18□□□□□ -1.74
SEN1YLR430W SIF2P38262 535 aa4.18□□□□□ -1.74
SEN1YLR430W GIC1P38785 314 aa4.18□□□□□ -1.74
SEN1YLR430W GET1P53192 235 aa4.18□□□□□ -1.74
SEN1YLR430W DMA2P53924 522 aa4.18□□□□□ -1.74
SEN1YLR430W FUR4P05316 633 aaKnown RBP4.18□□□□□ -1.74
SEN1YLR430W RPS24AP0CX31 135 aaKnown RBP4.18□□□□□ -1.74
SEN1YLR430W RPS24BP0CX32 135 aaKnown RBP4.18□□□□□ -1.74
SEN1YLR430W HPR1P17629 752 aaKnown RBP4.18□□□□□ -1.74
SEN1YLR430W RNA15P25299 296 aaPredicted RBP4.18□□□□□ -1.74
SEN1YLR430W SED4P25365 1065 aa4.18□□□□□ -1.74
SEN1YLR430W RER2P35196 286 aa4.18□□□□□ -1.74
SEN1YLR430W COS8P38723 381 aa4.18□□□□□ -1.74
SEN1YLR430W YAT2P40017 923 aa4.18□□□□□ -1.74
SEN1YLR430W FAR3P46671 204 aa4.18□□□□□ -1.74
SEN1YLR430W MRK1P50873 501 aa4.18□□□□□ -1.74
SEN1YLR430W RET3P53600 189 aa4.18□□□□□ -1.74
SEN1YLR430W GIS4Q04233 774 aa4.18□□□□□ -1.74
SEN1YLR430W GMC2Q06201 188 aa4.18□□□□□ -1.74
SEN1YLR430W YPR204WQ08995 1032 aa4.18□□□□□ -1.74
SEN1YLR430W RPL3P14126 387 aaKnown RBP4.18□□□□□ -1.74
SEN1YLR430W SRO9P25567 434 aaKnown RBP4.18□□□□□ -1.74
SEN1YLR430W SFA1P32771 386 aa4.18□□□□□ -1.74
SEN1YLR430W ERG7P38604 731 aa4.18□□□□□ -1.74
SEN1YLR430W MRPS18P42847 217 aa4.18□□□□□ -1.74
SEN1YLR430W NOP4P37838 685 aaKnown RBP4.17□□□□□ -1.74
SEN1YLR430W BSD2P38356 321 aa4.17□□□□□ -1.74
SEN1YLR430W MSR1P38714 643 aa4.17□□□□□ -1.74
SEN1YLR430W NDE1P40215 560 aa4.17□□□□□ -1.74
SEN1YLR430W NOP13P53883 403 aaKnown RBP RIP-Chip data4.17□□□□□ -1.74not detected
SEN1YLR430W SDH1Q00711 640 aa4.17□□□□□ -1.74
SEN1YLR430W TDA1Q03533 586 aa4.17□□□□□ -1.74
SEN1YLR430W MDM32Q12171 622 aa4.17□□□□□ -1.74
SEN1YLR430W DNF3Q12674 1656 aa4.17□□□□□ -1.74
SEN1YLR430W MRT4P33201 236 aaKnown RBP4.17□□□□□ -1.74
SEN1YLR430W BZZ1P38822 633 aa4.17□□□□□ -1.74
SEN1YLR430W PTI1P39927 425 aaPredicted RBP4.17□□□□□ -1.74
SEN1YLR430W YJL107CP42947 387 aa4.17□□□□□ -1.74
SEN1YLR430W APP1P53933 587 aa4.17□□□□□ -1.74
SEN1YLR430W YPR063CQ12160 140 aa4.17□□□□□ -1.74
SEN1YLR430W AI5_BETAQ9ZZX0 354 aa4.17□□□□□ -1.74
SEN1YLR430W BUD3P25558 1636 aa4.17□□□□□ -1.74
SEN1YLR430W TDH1P00360 332 aaKnown RBP4.17□□□□□ -1.74
SEN1YLR430W GCN4P03069 281 aa4.17□□□□□ -1.74
SEN1YLR430W PMA1P05030 918 aaKnown RBP4.17□□□□□ -1.74
SEN1YLR430W CBF1P17106 351 aa4.17□□□□□ -1.74
SEN1YLR430W DBF4P32325 704 aa4.17□□□□□ -1.74
SEN1YLR430W SRB2P34162 210 aa4.17□□□□□ -1.74
SEN1YLR430W JEN1P36035 616 aa4.17□□□□□ -1.74
SEN1YLR430W EFM3P47163 339 aa4.17□□□□□ -1.74
SEN1YLR430W FMP48P53233 369 aa4.17□□□□□ -1.74
SEN1YLR430W FOL1P53848 824 aa4.17□□□□□ -1.74
SEN1YLR430W ENT5Q03769 411 aaKnown RBP4.17□□□□□ -1.74
SEN1YLR430W YOR019WQ99248 730 aa4.17□□□□□ -1.74
SEN1YLR430W TRP2P00899 507 aaKnown RBP4.17□□□□□ -1.74
SEN1YLR430W REP2P03872 296 aa4.17□□□□□ -1.74
SEN1YLR430W ADP1P25371 1049 aa4.17□□□□□ -1.74
SEN1YLR430W MCM5P29496 775 aaKnown RBP4.17□□□□□ -1.74
SEN1YLR430W PRP21P32524 280 aaPredicted RBP4.17□□□□□ -1.74
SEN1YLR430W STB5P38699 743 aa4.17□□□□□ -1.74
SEN1YLR430W DED81P38707 554 aaKnown RBP4.17□□□□□ -1.74
SEN1YLR430W TOS3P43637 560 aa4.17□□□□□ -1.74
SEN1YLR430W BIO4P53630 237 aa4.17□□□□□ -1.74
SEN1YLR430W HXT11P54862 567 aa4.17□□□□□ -1.74
SEN1YLR430W HAS1Q03532 505 aaKnown RBP4.17□□□□□ -1.74
SEN1YLR430W YPS7Q06325 596 aa4.17□□□□□ -1.74
SEN1YLR430W IRC3Q06683 689 aa4.17□□□□□ -1.74
SEN1YLR430W CBS2P14905 389 aa4.17□□□□□ -1.74
SEN1YLR430W DMC1P25453 334 aa4.17□□□□□ -1.74
SEN1YLR430W IRE1P32361 1115 aa4.17□□□□□ -1.74
SEN1YLR430W YMR147WP40218 223 aaKnown RBP4.17□□□□□ -1.74
SEN1YLR430W VHR1P40522 640 aa4.17□□□□□ -1.74
SEN1YLR430W RPS12P48589 143 aaKnown RBP4.17□□□□□ -1.74
SEN1YLR430W PEX25Q02969 394 aa4.17□□□□□ -1.74
SEN1YLR430W PFA5Q03289 374 aa4.17□□□□□ -1.74
SEN1YLR430W RQC1Q05468 723 aaKnown RBP4.17□□□□□ -1.74
SEN1YLR430W CIA1Q05583 330 aa4.17□□□□□ -1.74
SEN1YLR430W BSC2Q05611 235 aa4.17□□□□□ -1.74
SEN1YLR430W YLR297WQ05899 129 aa4.17□□□□□ -1.74
SEN1YLR430W OXR1Q08952 273 aa4.17□□□□□ -1.74
SEN1YLR430W PUS9Q12069 462 aa4.17□□□□□ -1.74
SEN1YLR430W AEP3Q12089 606 aa4.17□□□□□ -1.74
SEN1YLR430W GPM3Q12326 303 aa4.17□□□□□ -1.74
SEN1YLR430W MAS1P10507 462 aa4.16□□□□□ -1.74
SEN1YLR430W NGG1P32494 702 aa4.16□□□□□ -1.74
SEN1YLR430W UGP1P32861 499 aaKnown RBP4.16□□□□□ -1.74
SEN1YLR430W MRPL3P36516 390 aa4.16□□□□□ -1.74
SEN1YLR430W THI6P41835 540 aa4.16□□□□□ -1.74
SEN1YLR430W NBP1P52919 319 aaPredicted RBP4.16□□□□□ -1.74
SEN1YLR430W TAD1P53065 400 aa4.16□□□□□ -1.74
SEN1YLR430W JIP4Q03361 876 aa4.16□□□□□ -1.74
SEN1YLR430W EFR3Q03653 782 aaKnown RBP4.16□□□□□ -1.74
SEN1YLR430W SNU56Q03782 492 aaKnown RBP4.16□□□□□ -1.74
SEN1YLR430W ATG16Q03818 150 aa4.16□□□□□ -1.74
SEN1YLR430W GAS2Q06135 555 aa4.16□□□□□ -1.74
SEN1YLR430W NBA1Q08229 501 aaKnown RBP4.16□□□□□ -1.74
SEN1YLR430W TUB2P02557 457 aaKnown RBP4.16□□□□□ -1.74
SEN1YLR430W COS111P38308 924 aa4.16□□□□□ -1.74
SEN1YLR430W HRB1P38922 454 aaKnown RBP RIP-Chip data4.16□□□□□ -1.74not detected
SEN1YLR430W IMO32P53219 342 aa4.16□□□□□ -1.74
Retrieved 100 of 5,963 RNA–protein pairs in 647 ms