RNA–Protein interactions for RNA: YJL154C

VPS35, Transcript of Endosomal subunit of membrane-associated retromer complex, yeastyeast

Gene VPS35, Length 2,835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS35YJL154C GLO1P50107 326 aa2.25□□□□□ -2.05
VPS35YJL154C LCL3P53153 274 aa2.25□□□□□ -2.05
VPS35YJL154C INN1P53901 409 aa2.25□□□□□ -2.05
VPS35YJL154C DPB4Q04603 196 aaKnown RBP2.25□□□□□ -2.05
VPS35YJL154C SWF1Q04629 336 aa2.25□□□□□ -2.05
VPS35YJL154C MFB1Q04922 465 aa2.25□□□□□ -2.05
VPS35YJL154C MCP2Q06567 569 aa2.25□□□□□ -2.05
VPS35YJL154C FMP40Q08968 688 aaPredicted RBP2.25□□□□□ -2.05
VPS35YJL154C PFA4Q12006 378 aa2.25□□□□□ -2.05
VPS35YJL154C LEU9Q12166 604 aaKnown RBP2.25□□□□□ -2.05
VPS35YJL154C PET111P08468 800 aa2.25□□□□□ -2.05
VPS35YJL154C RPL19AP0CX82 189 aaKnown RBP2.25□□□□□ -2.05
VPS35YJL154C RPL19BP0CX83 189 aaPredicted RBP2.25□□□□□ -2.05
VPS35YJL154C SRP54P20424 541 aaKnown RBP2.25□□□□□ -2.05
VPS35YJL154C RPB8P20436 146 aa2.25□□□□□ -2.05
VPS35YJL154C OCA4P25366 362 aa2.25□□□□□ -2.05
VPS35YJL154C SAC1P32368 623 aaKnown RBP2.25□□□□□ -2.05
VPS35YJL154C UPF3P48412 387 aaKnown RBP2.25□□□□□ -2.05
VPS35YJL154C YGR066CP53242 292 aa2.25□□□□□ -2.05
VPS35YJL154C MRPL19P53875 158 aa2.25□□□□□ -2.05
VPS35YJL154C INA17Q02888 182 aa2.25□□□□□ -2.05
VPS35YJL154C YLR455WQ06188 304 aa2.25□□□□□ -2.05
VPS35YJL154C CTI6Q08923 506 aa2.25□□□□□ -2.05
VPS35YJL154C TAD3Q9URQ3 322 aa2.25□□□□□ -2.05
VPS35YJL154C SPO14P36126 1683 aa2.25□□□□□ -2.05
VPS35YJL154C UFD4P33202 1483 aa2.24□□□□□ -2.05
VPS35YJL154C CBS1P14066 229 aa2.24□□□□□ -2.05
VPS35YJL154C YAP1P19880 650 aaKnown RBP2.24□□□□□ -2.05
VPS35YJL154C UBP11P36026 717 aa2.24□□□□□ -2.05
VPS35YJL154C RFC1P38630 861 aaKnown RBP2.24□□□□□ -2.05
VPS35YJL154C FAR3P46671 204 aa2.24□□□□□ -2.05
VPS35YJL154C YNL234WP53857 426 aa2.24□□□□□ -2.05
VPS35YJL154C MDG1P53885 366 aa2.24□□□□□ -2.05
VPS35YJL154C YMR178WQ03219 274 aaKnown RBP2.24□□□□□ -2.05
VPS35YJL154C EMI2Q04409 500 aaKnown RBP2.24□□□□□ -2.05
VPS35YJL154C ECM30Q06673 1274 aa2.24□□□□□ -2.05
VPS35YJL154C GET3Q12154 354 aaKnown RBP2.24□□□□□ -2.05
VPS35YJL154C CRC1Q12289 327 aa2.24□□□□□ -2.05
VPS35YJL154C YML133CQ03099 1374 aa2.24□□□□□ -2.05
VPS35YJL154C YLL067CQ07888 1374 aa2.24□□□□□ -2.05
VPS35YJL154C YLL066CQ99208 1374 aa2.24□□□□□ -2.05
VPS35YJL154C KRS1P15180 591 aaKnown RBP2.24□□□□□ -2.05
VPS35YJL154C EST1P17214 699 aaPredicted RBP2.24□□□□□ -2.05
VPS35YJL154C FUR1P18562 216 aaKnown RBP2.24□□□□□ -2.05
VPS35YJL154C PWP1P21304 576 aaKnown RBP2.24□□□□□ -2.05
VPS35YJL154C MAK32P23060 363 aa2.24□□□□□ -2.05
VPS35YJL154C TKL1P23254 680 aaKnown RBP2.24□□□□□ -2.05
VPS35YJL154C SEF1P34228 1148 aa2.24□□□□□ -2.05
VPS35YJL154C FLO5P38894 1075 aa2.24□□□□□ -2.05
VPS35YJL154C LTP1P40347 161 aa2.24□□□□□ -2.05
VPS35YJL154C DOT5P40553 215 aa2.24□□□□□ -2.05
VPS35YJL154C MAF1P41910 395 aa2.24□□□□□ -2.05
VPS35YJL154C YJL107CP42947 387 aa2.24□□□□□ -2.05
VPS35YJL154C RPN11P43588 306 aaKnown RBP2.24□□□□□ -2.05
VPS35YJL154C STP1Q00947 519 aa2.24□□□□□ -2.05
VPS35YJL154C SNT2P53127 1403 aa2.24□□□□□ -2.05
VPS35YJL154C ARG81P05085 880 aa2.23□□□□□ -2.05
VPS35YJL154C CDC31P06704 161 aaKnown RBP2.23□□□□□ -2.05
VPS35YJL154C ARD1P07347 238 aaPredicted RBP2.23□□□□□ -2.05
VPS35YJL154C GPA1P08539 472 aa2.23□□□□□ -2.05
VPS35YJL154C YMR085WP0CF18 432 aa2.23□□□□□ -2.05
VPS35YJL154C SUI2P20459 304 aaKnown RBP2.23□□□□□ -2.05
VPS35YJL154C MFT1P33441 392 aaKnown RBP2.23□□□□□ -2.05
VPS35YJL154C UTP9P38882 575 aaKnown RBP2.23□□□□□ -2.05
VPS35YJL154C ALG5P40350 334 aa2.23□□□□□ -2.05
VPS35YJL154C ESL1P40456 1118 aa2.23□□□□□ -2.05
VPS35YJL154C RSC9Q03124 581 aa2.23□□□□□ -2.05
VPS35YJL154C TDA9Q04545 1251 aa2.23□□□□□ -2.05
VPS35YJL154C EDE1P34216 1381 aa2.23□□□□□ -2.05
VPS35YJL154C YER145C-AA0A023PYF4 145 aa2.23□□□□□ -2.05
VPS35YJL154C PXL1P36166 706 aa2.23□□□□□ -2.05
VPS35YJL154C YIL024CP40543 189 aa2.23□□□□□ -2.05
VPS35YJL154C MRX6P48564 524 aa2.23□□□□□ -2.05
VPS35YJL154C COP1P53622 1201 aaKnown RBP2.23□□□□□ -2.05
VPS35YJL154C YNR061CP53747 219 aa2.23□□□□□ -2.05
VPS35YJL154C VPS75P53853 264 aa2.23□□□□□ -2.05
VPS35YJL154C DUG3P53871 357 aa2.23□□□□□ -2.05
VPS35YJL154C TIM10P87108 93 aa2.23□□□□□ -2.05
VPS35YJL154C NGL3Q03210 505 aa2.23□□□□□ -2.05
VPS35YJL154C GRC3Q07845 632 aa2.23□□□□□ -2.05
VPS35YJL154C NMD4Q12129 218 aa2.23□□□□□ -2.05
VPS35YJL154C YJR112W-AQ3E743 109 aa2.23□□□□□ -2.05
VPS35YJL154C TY1B-NL2Q99337 1749 aaKnown RBP2.23□□□□□ -2.05
VPS35YJL154C XRN1P22147 1528 aaKnown RBP2.23□□□□□ -2.05
VPS35YJL154C GDB1Q06625 1536 aa2.23□□□□□ -2.05
VPS35YJL154C OLE1P21147 510 aaKnown RBP2.23□□□□□ -2.05
VPS35YJL154C MBR1P23493 339 aa2.23□□□□□ -2.05
VPS35YJL154C BOS1P25385 244 aa2.23□□□□□ -2.05
VPS35YJL154C IMG1P25626 169 aa2.23□□□□□ -2.05
VPS35YJL154C YBR225WP38321 900 aa2.23□□□□□ -2.05
VPS35YJL154C TPA1P40032 644 aaKnown RBP2.23□□□□□ -2.05
VPS35YJL154C YIR016WP40572 265 aa2.23□□□□□ -2.05
VPS35YJL154C RPS0BP46654 252 aaKnown RBP2.23□□□□□ -2.05
VPS35YJL154C YPT11P48559 417 aa2.23□□□□□ -2.05
VPS35YJL154C MAK10Q02197 733 aa2.23□□□□□ -2.05
VPS35YJL154C YVH1Q02256 364 aaKnown RBP2.23□□□□□ -2.05
VPS35YJL154C YLR287CQ05881 355 aa2.23□□□□□ -2.05
VPS35YJL154C UTP21Q06078 939 aaPredicted RBP2.23□□□□□ -2.05
VPS35YJL154C LUC7Q07508 261 aaPredicted RBP2.23□□□□□ -2.05
VPS35YJL154C YEH1Q07804 573 aa2.23□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms