RNA–Protein interactions for RNA: YER088C

DOT6, Transcript of Protein involved in rRNA and ribosome biogenesis, yeast

Gene DOT6, Length 2,013 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DOT6	YER088C	YLL066W-A	P0CY00	160 aa		2.22	□□□□□ -2.05
DOT6	YER088C	YLL067W-A	P0CY01	160 aa		2.22	□□□□□ -2.05
DOT6	YER088C	MRP2	P10663	115 aa	Predicted RBP	2.22	□□□□□ -2.05
DOT6	YER088C	RAD16	P31244	790 aa		2.22	□□□□□ -2.05
DOT6	YER088C	MSS51	P32335	436 aa		2.22	□□□□□ -2.05
DOT6	YER088C	RRN3	P36070	627 aa		2.22	□□□□□ -2.05
DOT6	YER088C	ARP1	P38696	384 aa		2.22	□□□□□ -2.05
DOT6	YER088C	YMR124W	P39523	943 aa	Known RBP	2.22	□□□□□ -2.05
DOT6	YER088C	PFK26	P40433	827 aa	Known RBP	2.22	□□□□□ -2.05
DOT6	YER088C	YGL036W	P53185	909 aa	Predicted RBP	2.22	□□□□□ -2.05
DOT6	YER088C	SCW4	P53334	386 aa	Known RBP	2.22	□□□□□ -2.05
DOT6	YER088C	INN1	P53901	409 aa		2.22	□□□□□ -2.05
DOT6	YER088C	RCO1	Q04779	684 aa		2.22	□□□□□ -2.05
DOT6	YER088C	YAP7	Q08182	245 aa		2.22	□□□□□ -2.05
DOT6	YER088C	YOL159C	Q08300	171 aa		2.22	□□□□□ -2.05
DOT6	YER088C	NEW1	Q08972	1196 aa	Known RBP	2.22	□□□□□ -2.05
DOT6	YER088C	YOR019W	Q99248	730 aa		2.22	□□□□□ -2.05
DOT6	YER088C	RSF2	P46974	1380 aa		2.21	□□□□□ -2.06
DOT6	YER088C	KRS1	P15180	591 aa	Known RBP	2.21	□□□□□ -2.06
DOT6	YER088C	TKL1	P23254	680 aa	Known RBP	2.21	□□□□□ -2.06
DOT6	YER088C	CLB2	P24869	491 aa		2.21	□□□□□ -2.06
DOT6	YER088C	MGM1	P32266	881 aa		2.21	□□□□□ -2.06
DOT6	YER088C	TEF4	P36008	412 aa	Known RBP	2.21	□□□□□ -2.06
DOT6	YER088C	SPC97	P38863	823 aa		2.21	□□□□□ -2.06
DOT6	YER088C	RIC1	P40395	1056 aa		2.21	□□□□□ -2.06
DOT6	YER088C	YIL152W	P40455	235 aa		2.21	□□□□□ -2.06
DOT6	YER088C	YPT11	P48559	417 aa		2.21	□□□□□ -2.06
DOT6	YER088C	MPS1	P54199	764 aa		2.21	□□□□□ -2.06
DOT6	YER088C	SNO4	Q04902	237 aa		2.21	□□□□□ -2.06
DOT6	YER088C	HSP33	Q08914	237 aa	Known RBP	2.21	□□□□□ -2.06
DOT6	YER088C	HSP32	Q08992	237 aa		2.21	□□□□□ -2.06
DOT6	YER088C	ATG9	Q12142	997 aa		2.21	□□□□□ -2.06
DOT6	YER088C	SUI3	P09064	285 aa	Known RBP	2.2	□□□□□ -2.06
DOT6	YER088C	TFC3	P34111	1160 aa		2.2	□□□□□ -2.06
DOT6	YER088C	DPH1	P40487	425 aa	Known RBP	2.2	□□□□□ -2.06
DOT6	YER088C	HXT9	P40885	567 aa		2.2	□□□□□ -2.06
DOT6	YER088C	YFR020W	P43600	232 aa		2.2	□□□□□ -2.06
DOT6	YER088C	IRC8	P47046	822 aa		2.2	□□□□□ -2.06
DOT6	YER088C	INA17	Q02888	182 aa		2.2	□□□□□ -2.06
DOT6	YER088C	MUB1	Q03162	620 aa		2.2	□□□□□ -2.06
DOT6	YER088C	YKU80	Q04437	629 aa		2.2	□□□□□ -2.06
DOT6	YER088C	MRPL1	Q04599	285 aa		2.2	□□□□□ -2.06
DOT6	YER088C	SWF1	Q04629	336 aa		2.2	□□□□□ -2.06
DOT6	YER088C	ECM22	Q05958	814 aa	Predicted RBP	2.2	□□□□□ -2.06
DOT6	YER088C	SLC1	P33333	303 aa		2.2	□□□□□ -2.06
DOT6	YER088C	MRX1	P40050	688 aa		2.2	□□□□□ -2.06
DOT6	YER088C	KAP123	P40069	1113 aa	Known RBP	2.2	□□□□□ -2.06
DOT6	YER088C	SLZ1	P40167	298 aa		2.2	□□□□□ -2.06
DOT6	YER088C	SEC24	P40482	926 aa	Known RBP	2.2	□□□□□ -2.06
DOT6	YER088C	IME4	P41833	600 aa		2.2	□□□□□ -2.06
DOT6	YER088C	MEP3	P53390	489 aa		2.2	□□□□□ -2.06
DOT6	YER088C	YTP1	P53584	459 aa		2.2	□□□□□ -2.06
DOT6	YER088C	ARP9	Q05123	467 aa		2.2	□□□□□ -2.06
DOT6	YER088C	GSH2	Q08220	491 aa		2.2	□□□□□ -2.06
DOT6	YER088C	ERG27	Q12452	347 aa	Known RBP	2.2	□□□□□ -2.06
DOT6	YER088C	ADE6	P38972	1358 aa	Known RBP	2.2	□□□□□ -2.06
DOT6	YER088C	RIM15	P43565	1770 aa		2.19	□□□□□ -2.06
DOT6	YER088C	YLR302C	O13544	120 aa		2.19	□□□□□ -2.06
DOT6	YER088C	RPL42A	P0CX27	106 aa	Known RBP	2.19	□□□□□ -2.06
DOT6	YER088C	RPL42B	P0CX28	106 aa	Known RBP	2.19	□□□□□ -2.06
DOT6	YER088C	CNS1	P33313	385 aa		2.19	□□□□□ -2.06
DOT6	YER088C	SOF1	P33750	489 aa	Known RBP	2.19	□□□□□ -2.06
DOT6	YER088C	LHS1	P36016	881 aa		2.19	□□□□□ -2.06
DOT6	YER088C	UME6	P39001	836 aa		2.19	□□□□□ -2.06
DOT6	YER088C	PCL6	P40038	420 aa		2.19	□□□□□ -2.06
DOT6	YER088C	IML2	P47031	731 aa		2.19	□□□□□ -2.06
DOT6	YER088C	AAD10	P47182	288 aa		2.19	□□□□□ -2.06
DOT6	YER088C	ZDS2	P54786	942 aa		2.19	□□□□□ -2.06
DOT6	YER088C	MLH2	Q07980	695 aa		2.19	□□□□□ -2.06
DOT6	YER088C	YPL272C	Q08984	517 aa		2.19	□□□□□ -2.06
DOT6	YER088C	YLR112W	Q12130	139 aa		2.19	□□□□□ -2.06
DOT6	YER088C	SAC1	P32368	623 aa	Known RBP	2.18	□□□□□ -2.06
DOT6	YER088C	ATO2	P32907	282 aa		2.18	□□□□□ -2.06
DOT6	YER088C	ALY1	P36117	915 aa		2.18	□□□□□ -2.06
DOT6	YER088C	EFM2	P38347	419 aa		2.18	□□□□□ -2.06
DOT6	YER088C	MDV1	P47025	714 aa		2.18	□□□□□ -2.06
DOT6	YER088C	UBP8	P50102	471 aa		2.18	□□□□□ -2.06
DOT6	YER088C	YNL144C	P53907	740 aa		2.18	□□□□□ -2.06
DOT6	YER088C	PFA5	Q03289	374 aa		2.18	□□□□□ -2.06
DOT6	YER088C	RTT109	Q07794	436 aa		2.18	□□□□□ -2.06
DOT6	YER088C	SRL1	Q08673	210 aa		2.18	□□□□□ -2.06
DOT6	YER088C	YLR049C	Q12110	428 aa		2.18	□□□□□ -2.06
DOT6	YER088C	APC1	P53886	1748 aa		2.18	□□□□□ -2.06
DOT6	YER088C	FUM1	P08417	488 aa	Known RBP	2.18	□□□□□ -2.06
DOT6	YER088C	RPL19A	P0CX82	189 aa	Known RBP	2.18	□□□□□ -2.06
DOT6	YER088C	RPL19B	P0CX83	189 aa	Predicted RBP	2.18	□□□□□ -2.06
DOT6	YER088C	RAP1	P11938	827 aa		2.18	□□□□□ -2.06
DOT6	YER088C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	2.18	□□□□□ -2.06	not detected
DOT6	YER088C	MCM10	P32354	571 aa		2.18	□□□□□ -2.06
DOT6	YER088C	ESL2	P36168	1195 aa		2.18	□□□□□ -2.06
DOT6	YER088C	MNN2	P38069	597 aa		2.18	□□□□□ -2.06
DOT6	YER088C	PKP1	P40530	394 aa		2.18	□□□□□ -2.06
DOT6	YER088C	CBK1	P53894	756 aa		2.18	□□□□□ -2.06
DOT6	YER088C	SEC5	P89102	971 aa		2.18	□□□□□ -2.06
DOT6	YER088C	POS5	Q06892	414 aa		2.18	□□□□□ -2.06
DOT6	YER088C	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	2.18	□□□□□ -2.06	not detected
DOT6	YER088C	UBX3	Q12229	455 aa		2.18	□□□□□ -2.06
DOT6	YER088C	KAR3	P17119	729 aa		2.17	□□□□□ -2.06
DOT6	YER088C	YCR043C	P25361	127 aa		2.17	□□□□□ -2.06
DOT6	YER088C	RER1	P25560	188 aa		2.17	□□□□□ -2.06

Retrieved 100 of 5,963 RNA–protein pairs in 32.7 ms