RNA–Protein interactions for RNA: YDR495C

VPS3, Transcript of Component of CORVET membrane tethering complex, yeastyeast

Gene VPS3, Length 3,036 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS3YDR495C PRB1P09232 635 aa3.11□□□□□ -1.91
VPS3YDR495C RNA1P11745 407 aaKnown RBP3.11□□□□□ -1.91
VPS3YDR495C PDC5P16467 563 aaKnown RBP3.11□□□□□ -1.91
VPS3YDR495C CAD1P24813 409 aaKnown RBP3.11□□□□□ -1.91
VPS3YDR495C SRB5P32585 307 aa3.11□□□□□ -1.91
VPS3YDR495C TUL1P36096 758 aa3.11□□□□□ -1.91
VPS3YDR495C MRPL4P36517 319 aa3.11□□□□□ -1.91
VPS3YDR495C AGP2P38090 596 aa3.11□□□□□ -1.91
VPS3YDR495C NTC20P38302 140 aaPredicted RBP3.11□□□□□ -1.91
VPS3YDR495C FAD1P38913 306 aa3.11□□□□□ -1.91
VPS3YDR495C TMN3P40071 706 aa3.11□□□□□ -1.91
VPS3YDR495C BUR6P40096 142 aa3.11□□□□□ -1.91
VPS3YDR495C PNC1P53184 216 aaKnown RBP3.11□□□□□ -1.91
VPS3YDR495C VPS20Q04272 221 aa3.11□□□□□ -1.91
VPS3YDR495C YLR297WQ05899 129 aa3.11□□□□□ -1.91
VPS3YDR495C MCM21Q06675 368 aa3.11□□□□□ -1.91
VPS3YDR495C RBD2Q12270 262 aa3.11□□□□□ -1.91
VPS3YDR495C BMT6Q12291 365 aa3.11□□□□□ -1.91
VPS3YDR495C YVC1Q12324 675 aa3.11□□□□□ -1.91
VPS3YDR495C RIB2Q12362 591 aaKnown RBP3.11□□□□□ -1.91
VPS3YDR495C YDR461C-AQ2V2P7 80 aa3.11□□□□□ -1.91
VPS3YDR495C RAS1P01119 309 aa3.1□□□□□ -1.91
VPS3YDR495C KIN2P13186 1147 aaKnown RBP3.1□□□□□ -1.91
VPS3YDR495C UBA1P22515 1024 aaKnown RBP3.1□□□□□ -1.91
VPS3YDR495C ADH7P25377 361 aa3.1□□□□□ -1.91
VPS3YDR495C KRE6P32486 720 aa3.1□□□□□ -1.91
VPS3YDR495C MRE11P32829 692 aa3.1□□□□□ -1.91
VPS3YDR495C PHO11P35842 467 aa3.1□□□□□ -1.91
VPS3YDR495C TPO5P36029 618 aa3.1□□□□□ -1.91
VPS3YDR495C PXL1P36166 706 aa3.1□□□□□ -1.91
VPS3YDR495C PHO12P38693 467 aa3.1□□□□□ -1.91
VPS3YDR495C LIN1P38852 340 aaPredicted RBP3.1□□□□□ -1.91
VPS3YDR495C MNN9P39107 395 aaKnown RBP3.1□□□□□ -1.91
VPS3YDR495C YJL193WP39542 402 aa3.1□□□□□ -1.91
VPS3YDR495C YJL132WP47014 750 aa3.1□□□□□ -1.91
VPS3YDR495C APT1P49435 187 aaKnown RBP3.1□□□□□ -1.91
VPS3YDR495C RMD9P53140 646 aaKnown RBP3.1□□□□□ -1.91
VPS3YDR495C MPP6P53725 186 aaPredicted RBP3.1□□□□□ -1.91
VPS3YDR495C ASI2P53895 289 aa3.1□□□□□ -1.91
VPS3YDR495C MSC2Q03455 724 aa3.1□□□□□ -1.91
VPS3YDR495C YDR179W-AQ03983 463 aa3.1□□□□□ -1.91
VPS3YDR495C CUR1Q06469 252 aa3.1□□□□□ -1.91
VPS3YDR495C YPL272CQ08984 517 aa3.1□□□□□ -1.91
VPS3YDR495C LDB17Q12342 491 aa3.1□□□□□ -1.91
VPS3YDR495C YLR415CO13578 112 aa3.1□□□□□ -1.91
VPS3YDR495C CBP1P07252 654 aa3.1□□□□□ -1.91
VPS3YDR495C YML003WP0CF16 290 aa3.1□□□□□ -1.91
VPS3YDR495C GCD2P12754 651 aaPredicted RBP3.1□□□□□ -1.91
VPS3YDR495C CLC1P17891 233 aa3.1□□□□□ -1.91
VPS3YDR495C SNT1P25357 1226 aa3.1□□□□□ -1.91
VPS3YDR495C PRD1P25375 712 aa3.1□□□□□ -1.91
VPS3YDR495C BOS1P25385 244 aa3.1□□□□□ -1.91
VPS3YDR495C RFA2P26754 273 aaKnown RBP3.1□□□□□ -1.91
VPS3YDR495C DCG1P32460 244 aa3.1□□□□□ -1.91
VPS3YDR495C YME1P32795 747 aa3.1□□□□□ -1.91
VPS3YDR495C GDT1P38301 280 aaPredicted RBP3.1□□□□□ -1.91
VPS3YDR495C ALG5P40350 334 aa3.1□□□□□ -1.91
VPS3YDR495C YJL070CP40361 888 aa3.1□□□□□ -1.91
VPS3YDR495C YGR149WP48236 432 aa3.1□□□□□ -1.91
VPS3YDR495C YGL138CP53122 345 aa3.1□□□□□ -1.91
VPS3YDR495C ACL4Q03771 387 aa3.1□□□□□ -1.91
VPS3YDR495C CSI1Q04368 295 aa3.1□□□□□ -1.91
VPS3YDR495C ECM7Q06200 448 aa3.1□□□□□ -1.91
VPS3YDR495C VTS1Q08831 523 aaKnown RBP RIP-Chip data3.1□□□□□ -1.91not detected
VPS3YDR495C SPE1P08432 466 aa3.09□□□□□ -1.91
VPS3YDR495C MRP13P12686 339 aa3.09□□□□□ -1.91
VPS3YDR495C SRV2P17555 526 aaKnown RBP3.09□□□□□ -1.91
VPS3YDR495C URA4P20051 364 aa3.09□□□□□ -1.91
VPS3YDR495C VMA16P23968 213 aa3.09□□□□□ -1.91
VPS3YDR495C FAA1P30624 700 aaKnown RBP3.09□□□□□ -1.91
VPS3YDR495C DSS4P32601 143 aa3.09□□□□□ -1.91
VPS3YDR495C TIF3P34167 436 aaKnown RBP3.09□□□□□ -1.91
VPS3YDR495C KKQ8P36004 724 aa3.09□□□□□ -1.91
VPS3YDR495C GLG1P36143 616 aa3.09□□□□□ -1.91
VPS3YDR495C ETP1P38748 585 aaKnown RBP3.09□□□□□ -1.91
VPS3YDR495C RRM3P38766 723 aa3.09□□□□□ -1.91
VPS3YDR495C CEM1P39525 442 aa3.09□□□□□ -1.91
VPS3YDR495C GET2P40056 285 aa3.09□□□□□ -1.91
VPS3YDR495C YIL077CP40508 320 aa3.09□□□□□ -1.91
VPS3YDR495C EFM3P47163 339 aa3.09□□□□□ -1.91
VPS3YDR495C STR3P53101 465 aaKnown RBP3.09□□□□□ -1.91
VPS3YDR495C PRM1P53835 661 aa3.09□□□□□ -1.91
VPS3YDR495C HMO1Q03973 246 aaKnown RBP3.09□□□□□ -1.91
VPS3YDR495C GSH2Q08220 491 aa3.09□□□□□ -1.91
VPS3YDR495C GPN2Q08726 347 aaPredicted RBP3.09□□□□□ -1.91
VPS3YDR495C FMP40Q08968 688 aaPredicted RBP3.09□□□□□ -1.91
VPS3YDR495C MDM20Q12387 796 aaKnown RBP3.09□□□□□ -1.91
VPS3YDR495C GIS3Q12418 502 aa3.09□□□□□ -1.91
VPS3YDR495C HRP1Q99383 534 aaKnown RBP3.09□□□□□ -1.91
VPS3YDR495C ARG80P07249 177 aa3.09□□□□□ -1.91
VPS3YDR495C VPS3P23643 1011 aa3.09□□□□□ -1.91
VPS3YDR495C YJU2P28320 278 aaPredicted RBP3.09□□□□□ -1.91
VPS3YDR495C YBL028CP38202 106 aa3.09□□□□□ -1.91
VPS3YDR495C YBR259WP38338 688 aa3.09□□□□□ -1.91
VPS3YDR495C FKH2P41813 862 aa3.09□□□□□ -1.91
VPS3YDR495C ECM27P47144 725 aa3.09□□□□□ -1.91
VPS3YDR495C FMS1P50264 508 aa3.09□□□□□ -1.91
VPS3YDR495C YIP5P53108 310 aa3.09□□□□□ -1.91
VPS3YDR495C RPT4P53549 437 aaKnown RBP3.09□□□□□ -1.91
VPS3YDR495C YDR444WQ04093 687 aa3.09□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 24.6 ms