RNA–Protein interactions for RNA: YDR233C

RTN1, Transcript of Reticulon protein, yeast

Gene RTN1, Length 888 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RTN1	YDR233C	ADH7	P25377	361 aa		5.25	□□□□□ -1.57
RTN1	YDR233C	YIH1	P25637	258 aa		5.25	□□□□□ -1.57
RTN1	YDR233C	CMK1	P27466	446 aa	Known RBP	5.25	□□□□□ -1.57
RTN1	YDR233C	YKL050C	P35736	922 aa		5.25	□□□□□ -1.57
RTN1	YDR233C	HXT9	P40885	567 aa		5.25	□□□□□ -1.57
RTN1	YDR233C	GAT1	P43574	510 aa		5.25	□□□□□ -1.57
RTN1	YDR233C	EFM6	P53970	246 aa		5.25	□□□□□ -1.57
RTN1	YDR233C	MDM1	Q01846	1127 aa		5.25	□□□□□ -1.57
RTN1	YDR233C	RPC11	Q04307	110 aa	Predicted RBP	5.25	□□□□□ -1.57
RTN1	YDR233C	ARP9	Q05123	467 aa		5.25	□□□□□ -1.57
RTN1	YDR233C	RPS10A	Q08745	105 aa	Predicted RBP	5.25	□□□□□ -1.57
RTN1	YDR233C	YPT6	Q99260	215 aa		5.25	□□□□□ -1.57
RTN1	YDR233C	AIM17	P23180	465 aa	Known RBP	5.24	□□□□□ -1.57
RTN1	YDR233C	PTP1	P25044	335 aa		5.24	□□□□□ -1.57
RTN1	YDR233C	LCB1	P25045	558 aa	Known RBP	5.24	□□□□□ -1.57
RTN1	YDR233C	YCP4	P25349	247 aa	Known RBP	5.24	□□□□□ -1.57
RTN1	YDR233C	MIA40	P36046	403 aa		5.24	□□□□□ -1.57
RTN1	YDR233C	TSC10	P38342	320 aa		5.24	□□□□□ -1.57
RTN1	YDR233C	RFC1	P38630	861 aa	Known RBP	5.24	□□□□□ -1.57
RTN1	YDR233C	ANS1	P38832	159 aa		5.24	□□□□□ -1.57
RTN1	YDR233C	RGI2	P40188	164 aa		5.24	□□□□□ -1.57
RTN1	YDR233C	RPS10B	P46784	105 aa	Known RBP	5.24	□□□□□ -1.57
RTN1	YDR233C	SGM1	P47166	707 aa		5.24	□□□□□ -1.57
RTN1	YDR233C	SGF73	P53165	657 aa		5.24	□□□□□ -1.57
RTN1	YDR233C	RBG2	P53295	368 aa	Known RBP	5.24	□□□□□ -1.57
RTN1	YDR233C	TDA9	Q04545	1251 aa		5.24	□□□□□ -1.57
RTN1	YDR233C	YEH1	Q07804	573 aa		5.24	□□□□□ -1.57
RTN1	YDR233C	APL4	Q12028	832 aa		5.24	□□□□□ -1.57
RTN1	YDR233C	RCN2	Q12044	265 aa		5.24	□□□□□ -1.57
RTN1	YDR233C	YLR112W	Q12130	139 aa		5.24	□□□□□ -1.57
RTN1	YDR233C	RTP1	Q12751	981 aa		5.24	□□□□□ -1.57
RTN1	YDR233C	GCN4	P03069	281 aa		5.23	□□□□□ -1.57
RTN1	YDR233C	PUP3	P25451	205 aa	Known RBP	5.23	□□□□□ -1.57
RTN1	YDR233C	SRO77	P38163	1010 aa		5.23	□□□□□ -1.57
RTN1	YDR233C	YMR124W	P39523	943 aa	Known RBP	5.23	□□□□□ -1.57
RTN1	YDR233C	APT1	P49435	187 aa	Known RBP	5.23	□□□□□ -1.57
RTN1	YDR233C	DPB4	Q04603	196 aa	Known RBP	5.23	□□□□□ -1.57
RTN1	YDR233C	LUC7	Q07508	261 aa	Predicted RBP	5.23	□□□□□ -1.57
RTN1	YDR233C	BUD7	Q08754	746 aa		5.23	□□□□□ -1.57
RTN1	YDR233C	LEU9	Q12166	604 aa	Known RBP	5.23	□□□□□ -1.57
RTN1	YDR233C	HER1	Q12276	1246 aa		5.23	□□□□□ -1.57
RTN1	YDR233C	MF(ALPHA)1	P01149	165 aa		5.22	□□□□□ -1.57
RTN1	YDR233C	MRP7	P12687	371 aa		5.22	□□□□□ -1.57
RTN1	YDR233C	CBS1	P14066	229 aa		5.22	□□□□□ -1.57
RTN1	YDR233C	TIF3	P34167	436 aa	Known RBP	5.22	□□□□□ -1.57
RTN1	YDR233C	YIL060W	P40519	144 aa		5.22	□□□□□ -1.57
RTN1	YDR233C	SGN1	P40561	250 aa	Known RBP RIP-Chip data	5.22	□□□□□ -1.57	not detected
RTN1	YDR233C	BUD22	Q04347	519 aa	Known RBP	5.22	□□□□□ -1.57
RTN1	YDR233C	ATG26	Q06321	1198 aa		5.22	□□□□□ -1.57
RTN1	YDR233C	TSR2	Q06672	205 aa	Known RBP	5.22	□□□□□ -1.57
RTN1	YDR233C	GRC3	Q07845	632 aa		5.22	□□□□□ -1.57
RTN1	YDR233C	YJR112W-A	Q3E743	109 aa		5.22	□□□□□ -1.57
RTN1	YDR233C	CDC31	P06704	161 aa	Known RBP	5.21	□□□□□ -1.58
RTN1	YDR233C	SPE2	P21182	396 aa		5.21	□□□□□ -1.58
RTN1	YDR233C	GAC1	P28006	793 aa		5.21	□□□□□ -1.58
RTN1	YDR233C	GND1	P38720	489 aa	Known RBP	5.21	□□□□□ -1.58
RTN1	YDR233C	MAF1	P41910	395 aa		5.21	□□□□□ -1.58
RTN1	YDR233C	IRC6	P43615	237 aa		5.21	□□□□□ -1.58
RTN1	YDR233C	RMD8	P43620	662 aa		5.21	□□□□□ -1.58
RTN1	YDR233C	IRC8	P47046	822 aa		5.21	□□□□□ -1.58
RTN1	YDR233C	VPS25	P47142	202 aa		5.21	□□□□□ -1.58
RTN1	YDR233C	PKP2	P53170	491 aa		5.21	□□□□□ -1.58
RTN1	YDR233C	MSC1	Q03104	513 aa		5.21	□□□□□ -1.58
RTN1	YDR233C	EMI2	Q04409	500 aa	Known RBP	5.21	□□□□□ -1.58
RTN1	YDR233C	POS5	Q06892	414 aa		5.21	□□□□□ -1.58
RTN1	YDR233C	TEN1	Q07921	160 aa		5.21	□□□□□ -1.58
RTN1	YDR233C	ATX2	Q12067	313 aa		5.21	□□□□□ -1.58
RTN1	YDR233C	EDE1	P34216	1381 aa		5.2	□□□□□ -1.58
RTN1	YDR233C	YPR089W	O13585	888 aa		5.2	□□□□□ -1.58
RTN1	YDR233C	ARG3	P05150	338 aa		5.2	□□□□□ -1.58
RTN1	YDR233C	RPL42A	P0CX27	106 aa	Known RBP	5.2	□□□□□ -1.58
RTN1	YDR233C	RPL42B	P0CX28	106 aa	Known RBP	5.2	□□□□□ -1.58
RTN1	YDR233C	SSE2	P32590	693 aa	Known RBP	5.2	□□□□□ -1.58
RTN1	YDR233C	YBL055C	P34220	418 aa	Predicted RBP	5.2	□□□□□ -1.58
RTN1	YDR233C	NUP133	P36161	1157 aa		5.2	□□□□□ -1.58
RTN1	YDR233C	DBP8	P38719	431 aa		5.2	□□□□□ -1.58
RTN1	YDR233C	YEL057C	P39983	233 aa		5.2	□□□□□ -1.58
RTN1	YDR233C	SPO22	P40511	975 aa		5.2	□□□□□ -1.58
RTN1	YDR233C	HOS2	P53096	452 aa	Predicted RBP	5.2	□□□□□ -1.58
RTN1	YDR233C	IZH1	Q03419	316 aa		5.2	□□□□□ -1.58
RTN1	YDR233C	ARP10	Q04549	284 aa		5.2	□□□□□ -1.58
RTN1	YDR233C	MCP2	Q06567	569 aa		5.2	□□□□□ -1.58
RTN1	YDR233C	GSH2	Q08220	491 aa		5.2	□□□□□ -1.58
RTN1	YDR233C	FMP40	Q08968	688 aa	Predicted RBP	5.2	□□□□□ -1.58
RTN1	YDR233C	SGS1	P35187	1447 aa		5.2	□□□□□ -1.58
RTN1	YDR233C	MRP13	P12686	339 aa		5.19	□□□□□ -1.58
RTN1	YDR233C	IMG1	P25626	169 aa		5.19	□□□□□ -1.58
RTN1	YDR233C	PEP3	P27801	918 aa		5.19	□□□□□ -1.58
RTN1	YDR233C	SCO2	P38072	301 aa		5.19	□□□□□ -1.58
RTN1	YDR233C	REG2	P38232	338 aa		5.19	□□□□□ -1.58
RTN1	YDR233C	UBA4	P38820	440 aa		5.19	□□□□□ -1.58
RTN1	YDR233C	AFG3	P39925	761 aa		5.19	□□□□□ -1.58
RTN1	YDR233C	PCI8	P40512	444 aa		5.19	□□□□□ -1.58
RTN1	YDR233C	ERG26	P53199	349 aa	Known RBP	5.19	□□□□□ -1.58
RTN1	YDR233C	UTP21	Q06078	939 aa	Predicted RBP	5.19	□□□□□ -1.58
RTN1	YDR233C	GEP3	Q08622	556 aa		5.19	□□□□□ -1.58
RTN1	YDR233C	INH1	P01097	85 aa		5.18	□□□□□ -1.58
RTN1	YDR233C	PUT2	P07275	575 aa		5.18	□□□□□ -1.58
RTN1	YDR233C	EST1	P17214	699 aa	Predicted RBP	5.18	□□□□□ -1.58
RTN1	YDR233C	YBR144C	P34215	104 aa		5.18	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 11.9 ms