RNA–Protein interactions for RNA: YDR052C

DBF4, Transcript of Regulatory subunit of Cdc7p-Dbf4p kinase complex, yeast

Gene DBF4, Length 2,115 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DBF4	YDR052C	EXO1	P39875	702 aa		5.2	□□□□□ -1.58
DBF4	YDR052C	BIM1	P40013	344 aa		5.2	□□□□□ -1.58
DBF4	YDR052C	DAK2	P43550	591 aa		5.2	□□□□□ -1.58
DBF4	YDR052C	ABM1	P47146	123 aa		5.2	□□□□□ -1.58
DBF4	YDR052C	TOM22	P49334	152 aa		5.2	□□□□□ -1.58
DBF4	YDR052C	ARO8	P53090	500 aa	Known RBP	5.2	□□□□□ -1.58
DBF4	YDR052C	RET3	P53600	189 aa		5.2	□□□□□ -1.58
DBF4	YDR052C	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	5.2	□□□□□ -1.58	not detected
DBF4	YDR052C	KAP120	Q02932	1032 aa		5.2	□□□□□ -1.58
DBF4	YDR052C	IRC4	Q03036	179 aa		5.2	□□□□□ -1.58
DBF4	YDR052C	BUL2	Q03758	920 aa	Known RBP	5.2	□□□□□ -1.58
DBF4	YDR052C	GAL83	Q04739	417 aa		5.2	□□□□□ -1.58
DBF4	YDR052C	MRX10	Q05648	414 aa		5.2	□□□□□ -1.58
DBF4	YDR052C	BUR2	Q05949	395 aa		5.2	□□□□□ -1.58
DBF4	YDR052C	CDC73	Q06697	393 aa		5.2	□□□□□ -1.58
DBF4	YDR052C	LUC7	Q07508	261 aa	Predicted RBP	5.2	□□□□□ -1.58
DBF4	YDR052C	ULA1	Q12059	462 aa		5.2	□□□□□ -1.58
DBF4	YDR052C	PAA1	Q12447	191 aa	Known RBP	5.2	□□□□□ -1.58
DBF4	YDR052C	TY1B-NL2	Q99337	1749 aa	Known RBP	5.19	□□□□□ -1.58
DBF4	YDR052C	MIS1	P09440	975 aa	Known RBP	5.19	□□□□□ -1.58
DBF4	YDR052C	FRS1	P15624	595 aa	Known RBP	5.19	□□□□□ -1.58
DBF4	YDR052C	APA1	P16550	321 aa	Known RBP	5.19	□□□□□ -1.58
DBF4	YDR052C	UTR4	P32626	227 aa		5.19	□□□□□ -1.58
DBF4	YDR052C	VAM7	P32912	316 aa		5.19	□□□□□ -1.58
DBF4	YDR052C	BDF1	P35817	686 aa		5.19	□□□□□ -1.58
DBF4	YDR052C	JEN1	P36035	616 aa		5.19	□□□□□ -1.58
DBF4	YDR052C	SIF2	P38262	535 aa		5.19	□□□□□ -1.58
DBF4	YDR052C	HRB1	P38922	454 aa	Known RBP RIP-Chip data	5.19	□□□□□ -1.58	not detected
DBF4	YDR052C	YER184C	P39961	794 aa		5.19	□□□□□ -1.58
DBF4	YDR052C	SPF1	P39986	1215 aa	Known RBP	5.19	□□□□□ -1.58
DBF4	YDR052C	KRE29	P40026	464 aa		5.19	□□□□□ -1.58
DBF4	YDR052C	THO1	P40040	218 aa	Known RBP	5.19	□□□□□ -1.58
DBF4	YDR052C	UTP25	P40498	721 aa	Known RBP	5.19	□□□□□ -1.58
DBF4	YDR052C	RET2	P43621	546 aa		5.19	□□□□□ -1.58
DBF4	YDR052C	CCT8	P47079	568 aa	Known RBP	5.19	□□□□□ -1.58
DBF4	YDR052C	RSM7	P47150	247 aa		5.19	□□□□□ -1.58
DBF4	YDR052C	NOP19	P53317	196 aa	Predicted RBP	5.19	□□□□□ -1.58
DBF4	YDR052C	MTD1	Q02046	320 aa	Known RBP	5.19	□□□□□ -1.58
DBF4	YDR052C	PLM2	Q04383	521 aa		5.19	□□□□□ -1.58
DBF4	YDR052C	REH1	Q06709	432 aa		5.19	□□□□□ -1.58
DBF4	YDR052C	THI20	Q08224	551 aa		5.19	□□□□□ -1.58
DBF4	YDR052C	FRE3	Q08905	711 aa		5.19	□□□□□ -1.58
DBF4	YDR052C	HAL9	Q12180	1030 aa		5.19	□□□□□ -1.58
DBF4	YDR052C	PHM7	Q12252	991 aa		5.19	□□□□□ -1.58
DBF4	YDR052C	RRP12	Q12754	1228 aa	Known RBP	5.19	□□□□□ -1.58
DBF4	YDR052C	RPL25	P04456	142 aa	Known RBP	5.18	□□□□□ -1.58
DBF4	YDR052C	RAD10	P06838	210 aa		5.18	□□□□□ -1.58
DBF4	YDR052C	SPO16	P17122	198 aa		5.18	□□□□□ -1.58
DBF4	YDR052C	CCA1	P21269	546 aa		5.18	□□□□□ -1.58
DBF4	YDR052C	AMS1	P22855	1083 aa		5.18	□□□□□ -1.58
DBF4	YDR052C	PPH22	P23595	377 aa		5.18	□□□□□ -1.58
DBF4	YDR052C	VPS17	P32913	551 aa		5.18	□□□□□ -1.58
DBF4	YDR052C	MKS1	P34072	584 aa		5.18	□□□□□ -1.58
DBF4	YDR052C	SCO2	P38072	301 aa		5.18	□□□□□ -1.58
DBF4	YDR052C	POP4	P38336	279 aa		5.18	□□□□□ -1.58
DBF4	YDR052C	PCA1	P38360	1216 aa		5.18	□□□□□ -1.58
DBF4	YDR052C	CBR1	P38626	284 aa	Known RBP	5.18	□□□□□ -1.58
DBF4	YDR052C	VMA13	P41807	478 aa	Known RBP	5.18	□□□□□ -1.58
DBF4	YDR052C	EFM3	P47163	339 aa		5.18	□□□□□ -1.58
DBF4	YDR052C	RPS12	P48589	143 aa	Known RBP	5.18	□□□□□ -1.58
DBF4	YDR052C	PAL1	Q05518	499 aa	Known RBP	5.18	□□□□□ -1.58
DBF4	YDR052C	RBS1	Q05672	457 aa	Known RBP	5.18	□□□□□ -1.58
DBF4	YDR052C	YPR091C	Q06833	770 aa		5.18	□□□□□ -1.58
DBF4	YDR052C	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	5.18	□□□□□ -1.58	not detected
DBF4	YDR052C	SRN2	Q99176	213 aa		5.18	□□□□□ -1.58
DBF4	YDR052C	TY4B-H	P0C2J7	1802 aa		5.18	□□□□□ -1.58
DBF4	YDR052C	TY4B-J	P47024	1803 aa		5.18	□□□□□ -1.58
DBF4	YDR052C	YLR462W	O13556	202 aa		5.18	□□□□□ -1.58
DBF4	YDR052C	BI2	P03873	423 aa		5.18	□□□□□ -1.58
DBF4	YDR052C	BI4	P03879	638 aa		5.18	□□□□□ -1.58
DBF4	YDR052C	ARG82	P07250	355 aa		5.18	□□□□□ -1.58
DBF4	YDR052C	RAM1	P22007	431 aa		5.18	□□□□□ -1.58
DBF4	YDR052C	APA2	P22108	325 aa		5.18	□□□□□ -1.58
DBF4	YDR052C	MSS1	P32559	526 aa	Predicted RBP	5.18	□□□□□ -1.58
DBF4	YDR052C	UGP1	P32861	499 aa	Known RBP	5.18	□□□□□ -1.58
DBF4	YDR052C	CBT1	P36038	271 aa	Predicted RBP	5.18	□□□□□ -1.58
DBF4	YDR052C	CAF4	P36130	643 aa		5.18	□□□□□ -1.58
DBF4	YDR052C	MRPL37	P36532	105 aa		5.18	□□□□□ -1.58
DBF4	YDR052C	VHC1	P38329	1120 aa		5.18	□□□□□ -1.58
DBF4	YDR052C	GUA1	P38625	525 aa	Known RBP	5.18	□□□□□ -1.58
DBF4	YDR052C	SRP72	P38688	640 aa	Known RBP	5.18	□□□□□ -1.58
DBF4	YDR052C	YHL049C	P38722	271 aa		5.18	□□□□□ -1.58
DBF4	YDR052C	QNS1	P38795	714 aa	Known RBP	5.18	□□□□□ -1.58
DBF4	YDR052C	YEL075C	P39972	122 aa		5.18	□□□□□ -1.58
DBF4	YDR052C	YER189W	P40104	122 aa		5.18	□□□□□ -1.58
DBF4	YDR052C	NUP82	P40368	713 aa		5.18	□□□□□ -1.58
DBF4	YDR052C	MRPS18	P42847	217 aa		5.18	□□□□□ -1.58
DBF4	YDR052C	YFL064C	P43540	174 aa		5.18	□□□□□ -1.58
DBF4	YDR052C	HXT10	P43581	546 aa		5.18	□□□□□ -1.58
DBF4	YDR052C	SAD1	P43589	448 aa		5.18	□□□□□ -1.58
DBF4	YDR052C	SAE2	P46946	345 aa		5.18	□□□□□ -1.58
DBF4	YDR052C	IRC8	P47046	822 aa		5.18	□□□□□ -1.58
DBF4	YDR052C	IRC18	P47056	224 aa		5.18	□□□□□ -1.58
DBF4	YDR052C	ACF4	P47129	309 aa		5.18	□□□□□ -1.58
DBF4	YDR052C	PPT1	P53043	513 aa		5.18	□□□□□ -1.58
DBF4	YDR052C	TEP1	P53916	434 aa		5.18	□□□□□ -1.58
DBF4	YDR052C	RRN5	Q02983	363 aa		5.18	□□□□□ -1.58
DBF4	YDR052C	MYO5	Q04439	1219 aa	Known RBP	5.18	□□□□□ -1.58
DBF4	YDR052C	UFO1	Q04511	668 aa		5.18	□□□□□ -1.58
DBF4	YDR052C	THI3	Q07471	609 aa		5.18	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 18.5 ms