RNA–Protein interactions for RNA: YDR049W

VMS1, Transcript of Component of a Cdc48p-complex involved in protein quality control, yeastyeast

Gene VMS1, Length 1,899 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMS1YDR049W SPE4Q12455 300 aa5.77□□□□□ -1.49
VMS1YDR049W SRN2Q99176 213 aa5.77□□□□□ -1.49
VMS1YDR049W YPR089WO13585 888 aa5.76□□□□□ -1.49
VMS1YDR049W URA3P03962 267 aa5.76□□□□□ -1.49
VMS1YDR049W PET18P25362 215 aa5.76□□□□□ -1.49
VMS1YDR049W YME1P32795 747 aa5.76□□□□□ -1.49
VMS1YDR049W KES1P35844 434 aaKnown RBP5.76□□□□□ -1.49
VMS1YDR049W ALG14P38242 237 aa5.76□□□□□ -1.49
VMS1YDR049W SLM4P38247 162 aa5.76□□□□□ -1.49
VMS1YDR049W NET1P47035 1189 aa5.76□□□□□ -1.49
VMS1YDR049W GTO1P48239 356 aa5.76□□□□□ -1.49
VMS1YDR049W PRP31P49704 494 aaPredicted RBP5.76□□□□□ -1.49
VMS1YDR049W SRL4Q03085 281 aa5.76□□□□□ -1.49
VMS1YDR049W IVY1Q04934 453 aa5.76□□□□□ -1.49
VMS1YDR049W RTT103Q05543 409 aa5.76□□□□□ -1.49
VMS1YDR049W YPS7Q06325 596 aa5.76□□□□□ -1.49
VMS1YDR049W VAM6Q07468 1049 aa5.76□□□□□ -1.49
VMS1YDR049W XYL2Q07993 356 aa5.76□□□□□ -1.49
VMS1YDR049W NUS1Q12063 375 aa5.76□□□□□ -1.49
VMS1YDR049W UPC2Q12151 913 aa5.76□□□□□ -1.49
VMS1YDR049W NTO1Q12311 748 aa5.76□□□□□ -1.49
VMS1YDR049W YVC1Q12324 675 aa5.76□□□□□ -1.49
VMS1YDR049W YPT6Q99260 215 aa5.76□□□□□ -1.49
VMS1YDR049W CDC37P06101 506 aaKnown RBP5.75□□□□□ -1.49
VMS1YDR049W CBP1P07252 654 aa5.75□□□□□ -1.49
VMS1YDR049W SRV2P17555 526 aaKnown RBP5.75□□□□□ -1.49
VMS1YDR049W GEX1P25596 615 aa5.75□□□□□ -1.49
VMS1YDR049W NDI1P32340 513 aa5.75□□□□□ -1.49
VMS1YDR049W NTH1P32356 751 aa5.75□□□□□ -1.49
VMS1YDR049W ARO4P32449 370 aaKnown RBP5.75□□□□□ -1.49
VMS1YDR049W GDH2P33327 1092 aaKnown RBP5.75□□□□□ -1.49
VMS1YDR049W LRG1P35688 1017 aa5.75□□□□□ -1.49
VMS1YDR049W CMC1P36064 111 aa5.75□□□□□ -1.49
VMS1YDR049W AUR1P36107 401 aaPredicted RBP5.75□□□□□ -1.49
VMS1YDR049W NUP133P36161 1157 aa5.75□□□□□ -1.49
VMS1YDR049W AKL1P38080 1108 aaKnown RBP5.75□□□□□ -1.49
VMS1YDR049W KTR3P38130 404 aaPredicted RBP5.75□□□□□ -1.49
VMS1YDR049W CDS1P38221 457 aa5.75□□□□□ -1.49
VMS1YDR049W MLH1P38920 769 aa5.75□□□□□ -1.49
VMS1YDR049W PRM9P39551 298 aa5.75□□□□□ -1.49
VMS1YDR049W NPP2P39997 493 aa5.75□□□□□ -1.49
VMS1YDR049W ZRG8P40021 1076 aa5.75□□□□□ -1.49
VMS1YDR049W YER156CP40093 338 aaKnown RBP5.75□□□□□ -1.49
VMS1YDR049W SGN1P40561 250 aaKnown RBP RIP-Chip data5.75□□□□□ -1.49not detected
VMS1YDR049W MND1P53102 219 aa5.75□□□□□ -1.49
VMS1YDR049W YNR065CP53751 1116 aa5.75□□□□□ -1.49
VMS1YDR049W PRM1P53835 661 aa5.75□□□□□ -1.49
VMS1YDR049W INN1P53901 409 aa5.75□□□□□ -1.49
VMS1YDR049W GIM5Q04493 163 aa5.75□□□□□ -1.49
VMS1YDR049W BUD7Q08754 746 aa5.75□□□□□ -1.49
VMS1YDR049W YLL058WQ12198 575 aa5.75□□□□□ -1.49
VMS1YDR049W MMS22Q06164 1454 aa5.75□□□□□ -1.49
VMS1YDR049W TEF1P02994 458 aaKnown RBP5.75□□□□□ -1.49
VMS1YDR049W YCR061WP25639 631 aa5.75□□□□□ -1.49
VMS1YDR049W MRT4P33201 236 aaKnown RBP5.75□□□□□ -1.49
VMS1YDR049W PMT1P33775 817 aa5.75□□□□□ -1.49
VMS1YDR049W TFA2P36145 328 aa5.75□□□□□ -1.49
VMS1YDR049W GEX2P36173 615 aa5.75□□□□□ -1.49
VMS1YDR049W YHR045WP38775 560 aa5.75□□□□□ -1.49
VMS1YDR049W FET4P40988 552 aa5.75□□□□□ -1.49
VMS1YDR049W LSB6P42951 607 aa5.75□□□□□ -1.49
VMS1YDR049W RPA34P47006 233 aaPredicted RBP5.75□□□□□ -1.49
VMS1YDR049W URB2P47108 1174 aa5.75□□□□□ -1.49
VMS1YDR049W PEF1P53238 335 aa5.75□□□□□ -1.49
VMS1YDR049W SPO19Q03029 223 aa5.75□□□□□ -1.49
VMS1YDR049W STP4Q07351 490 aa5.75□□□□□ -1.49
VMS1YDR049W ICL2Q12031 575 aa5.75□□□□□ -1.49
VMS1YDR049W RIO1Q12196 484 aaKnown RBP5.75□□□□□ -1.49
VMS1YDR049W VCX1Q99385 411 aa5.75□□□□□ -1.49
VMS1YDR049W CFT1Q06632 1357 aaKnown RBP5.74□□□□□ -1.49
VMS1YDR049W KOG1P38873 1557 aa5.74□□□□□ -1.49
VMS1YDR049W HIP1P06775 603 aa5.74□□□□□ -1.49
VMS1YDR049W PET494P07390 489 aaPredicted RBP5.74□□□□□ -1.49
VMS1YDR049W PRP16P15938 1071 aaPredicted RBP5.74□□□□□ -1.49
VMS1YDR049W UGA1P17649 471 aa5.74□□□□□ -1.49
VMS1YDR049W YCL068CP25593 260 aa5.74□□□□□ -1.49
VMS1YDR049W MAL33P38157 468 aa5.74□□□□□ -1.49
VMS1YDR049W PFF1P38244 976 aa5.74□□□□□ -1.49
VMS1YDR049W TDP1P38319 544 aa5.74□□□□□ -1.49
VMS1YDR049W SFB3P38810 929 aa5.74□□□□□ -1.49
VMS1YDR049W CCT6P39079 546 aa5.74□□□□□ -1.49
VMS1YDR049W ALG5P40350 334 aa5.74□□□□□ -1.49
VMS1YDR049W HAM1P47119 197 aaKnown RBP5.74□□□□□ -1.49
VMS1YDR049W ECM27P47144 725 aa5.74□□□□□ -1.49
VMS1YDR049W BIO5P53744 561 aaKnown RBP5.74□□□□□ -1.49
VMS1YDR049W LEE1Q02799 301 aaKnown RBP5.74□□□□□ -1.49
VMS1YDR049W HED1Q03937 162 aa5.74□□□□□ -1.49
VMS1YDR049W ECM11Q04110 302 aa5.74□□□□□ -1.49
VMS1YDR049W YFH1Q07540 174 aa5.74□□□□□ -1.49
VMS1YDR049W HRK1Q08732 759 aaKnown RBP5.74□□□□□ -1.49
VMS1YDR049W SUL2Q12325 893 aa5.74□□□□□ -1.49
VMS1YDR049W ATP2P00830 511 aaKnown RBP5.73□□□□□ -1.49
VMS1YDR049W AI1P03875 834 aa5.73□□□□□ -1.49
VMS1YDR049W ARG1P22768 420 aa5.73□□□□□ -1.49
VMS1YDR049W RVS161P25343 265 aaKnown RBP5.73□□□□□ -1.49
VMS1YDR049W YME2P32843 850 aa5.73□□□□□ -1.49
VMS1YDR049W SER3P40054 469 aa5.73□□□□□ -1.49
VMS1YDR049W BIO3P50277 480 aa5.73□□□□□ -1.49
VMS1YDR049W YGL185CP53100 379 aa5.73□□□□□ -1.49
VMS1YDR049W YGR012WP53206 393 aa5.73□□□□□ -1.49
Retrieved 100 of 5,963 RNA–protein pairs in 11.8 ms