RNA–Protein interactions for RNA: YBR221C

PDB1, Transcript of E1 beta subunit of the pyruvate dehydrogenase (PDH) complex, yeastyeast

Gene PDB1, Length 1,101 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDB1YBR221C YKR051WP36142 418 aa5.67□□□□□ -1.5
PDB1YBR221C UBP13P38187 747 aa5.67□□□□□ -1.5
PDB1YBR221C CST26P38226 397 aa5.67□□□□□ -1.5
PDB1YBR221C SSZ1P38788 538 aaKnown RBP5.67□□□□□ -1.5
PDB1YBR221C RTR1P40084 226 aaPredicted RBP5.67□□□□□ -1.5
PDB1YBR221C IST3P40565 148 aaPredicted RBP5.67□□□□□ -1.5
PDB1YBR221C MAD2P40958 196 aa5.67□□□□□ -1.5
PDB1YBR221C YFL040WP43562 540 aa5.67□□□□□ -1.5
PDB1YBR221C EMC2P47133 292 aaKnown RBP5.67□□□□□ -1.5
PDB1YBR221C ABM1P47146 123 aa5.67□□□□□ -1.5
PDB1YBR221C YJR124CP47159 448 aa5.67□□□□□ -1.5
PDB1YBR221C TOM22P49334 152 aa5.67□□□□□ -1.5
PDB1YBR221C ESBP6P53918 673 aa5.67□□□□□ -1.5
PDB1YBR221C ARX1Q03862 593 aaKnown RBP5.67□□□□□ -1.5
PDB1YBR221C GSH2Q08220 491 aa5.67□□□□□ -1.5
PDB1YBR221C RKM1Q08961 583 aaPredicted RBP5.67□□□□□ -1.5
PDB1YBR221C NCR1Q12200 1170 aa5.67□□□□□ -1.5
PDB1YBR221C YDR061WQ12298 539 aa5.67□□□□□ -1.5
PDB1YBR221C SWI1P09547 1314 aa5.67□□□□□ -1.5
PDB1YBR221C DIF1O13577 133 aa5.66□□□□□ -1.5
PDB1YBR221C HXK2P04807 486 aaKnown RBP5.66□□□□□ -1.5
PDB1YBR221C PCK1P10963 549 aa5.66□□□□□ -1.5
PDB1YBR221C MSB1P21339 1137 aaKnown RBP5.66□□□□□ -1.5
PDB1YBR221C AFG1P32317 509 aa5.66□□□□□ -1.5
PDB1YBR221C PGM1P33401 570 aaKnown RBP5.66□□□□□ -1.5
PDB1YBR221C RSM22P36056 628 aa5.66□□□□□ -1.5
PDB1YBR221C MCX1P38323 520 aaPredicted RBP5.66□□□□□ -1.5
PDB1YBR221C KSP1P38691 1029 aaKnown RBP5.66□□□□□ -1.5
PDB1YBR221C NEM1P38757 446 aa5.66□□□□□ -1.5
PDB1YBR221C SSO2P39926 295 aa5.66□□□□□ -1.5
PDB1YBR221C VMA13P41807 478 aaKnown RBP5.66□□□□□ -1.5
PDB1YBR221C HSH155P49955 971 aaKnown RBP5.66□□□□□ -1.5
PDB1YBR221C YGL138CP53122 345 aa5.66□□□□□ -1.5
PDB1YBR221C NOP15P53927 220 aaPredicted RBP5.66□□□□□ -1.5
PDB1YBR221C KAP120Q02932 1032 aa5.66□□□□□ -1.5
PDB1YBR221C YPL034WQ03083 165 aa5.66□□□□□ -1.5
PDB1YBR221C RSN1Q03516 953 aa5.66□□□□□ -1.5
PDB1YBR221C CLU1Q03690 1277 aaKnown RBP5.66□□□□□ -1.5
PDB1YBR221C SOV1Q04748 898 aa5.66□□□□□ -1.5
PDB1YBR221C THI22Q06490 572 aa5.66□□□□□ -1.5
PDB1YBR221C AAD4Q07747 329 aa5.66□□□□□ -1.5
PDB1YBR221C BUD20Q08004 166 aaPredicted RBP5.66□□□□□ -1.5
PDB1YBR221C LYS21Q12122 440 aaKnown RBP5.66□□□□□ -1.5
PDB1YBR221C HOS1Q12214 470 aa5.66□□□□□ -1.5
PDB1YBR221C PTC5Q12511 572 aa5.66□□□□□ -1.5
PDB1YBR221C YJR112W-AQ3E743 109 aa5.66□□□□□ -1.5
PDB1YBR221C GSC2P40989 1895 aa5.66□□□□□ -1.5
PDB1YBR221C STE3P06783 470 aa5.65□□□□□ -1.5
PDB1YBR221C DFR1P07807 211 aaKnown RBP RIP-Chip data5.65□□□□□ -1.5not detected
PDB1YBR221C RPL11AP0C0W9 174 aaKnown RBP5.65□□□□□ -1.5
PDB1YBR221C RSR1P13856 272 aa5.65□□□□□ -1.5
PDB1YBR221C IMG2P25642 146 aaPredicted RBP5.65□□□□□ -1.5
PDB1YBR221C ARP2P32381 391 aaKnown RBP5.65□□□□□ -1.5
PDB1YBR221C YKR078WP36158 585 aaKnown RBP5.65□□□□□ -1.5
PDB1YBR221C SMF2P38778 549 aa5.65□□□□□ -1.5
PDB1YBR221C YTA12P40341 825 aa5.65□□□□□ -1.5
PDB1YBR221C INP51P40559 946 aaKnown RBP5.65□□□□□ -1.5
PDB1YBR221C SMC3P47037 1230 aa5.65□□□□□ -1.5
PDB1YBR221C YGR066CP53242 292 aa5.65□□□□□ -1.5
PDB1YBR221C YGR067CP53243 804 aa5.65□□□□□ -1.5
PDB1YBR221C NOG2P53742 486 aaKnown RBP5.65□□□□□ -1.5
PDB1YBR221C RHO5P53879 331 aaKnown RBP5.65□□□□□ -1.5
PDB1YBR221C YNL143CP53908 130 aa5.65□□□□□ -1.5
PDB1YBR221C REG1Q00816 1014 aa5.65□□□□□ -1.5
PDB1YBR221C DFG5Q05031 458 aa5.65□□□□□ -1.5
PDB1YBR221C CUR1Q06469 252 aa5.65□□□□□ -1.5
PDB1YBR221C CRD1Q07560 283 aa5.65□□□□□ -1.5
PDB1YBR221C VIK1Q12045 647 aa5.65□□□□□ -1.5
PDB1YBR221C GLO4Q12320 285 aa5.65□□□□□ -1.5
PDB1YBR221C RPL11BQ3E757 174 aaPredicted RBP5.65□□□□□ -1.5
PDB1YBR221C MOD5P07884 428 aa5.64□□□□□ -1.51
PDB1YBR221C TY1A-LR4P0C2I8 440 aaKnown RBP5.64□□□□□ -1.51
PDB1YBR221C TY1A-DR6P0CX70 440 aa5.64□□□□□ -1.51
PDB1YBR221C TY1A-ER1P0CX71 440 aa5.64□□□□□ -1.51
PDB1YBR221C TY1A-LR2P0CX72 440 aa5.64□□□□□ -1.51
PDB1YBR221C TY1A-PLP0CX73 440 aa5.64□□□□□ -1.51
PDB1YBR221C TY1A-JR1P0CX74 440 aa5.64□□□□□ -1.51
PDB1YBR221C TY1A-LR3P0CX75 440 aa5.64□□□□□ -1.51
PDB1YBR221C TY1A-ML2P0CX76 440 aa5.64□□□□□ -1.51
PDB1YBR221C YPK2P18961 677 aa5.64□□□□□ -1.51
PDB1YBR221C DAL81P21657 970 aa5.64□□□□□ -1.51
PDB1YBR221C GID7P25569 745 aa5.64□□□□□ -1.51
PDB1YBR221C SYN8P31377 255 aa5.64□□□□□ -1.51
PDB1YBR221C MF(ALPHA)2P32435 120 aa5.64□□□□□ -1.51
PDB1YBR221C OCT1P35999 772 aa5.64□□□□□ -1.51
PDB1YBR221C RRT2P38332 387 aa5.64□□□□□ -1.51
PDB1YBR221C TSL1P38427 1098 aaKnown RBP5.64□□□□□ -1.51
PDB1YBR221C ERC1P38767 581 aa5.64□□□□□ -1.51
PDB1YBR221C YHR182WP38870 785 aa5.64□□□□□ -1.51
PDB1YBR221C PET100P38958 111 aa5.64□□□□□ -1.51
PDB1YBR221C YER085CP40058 173 aa5.64□□□□□ -1.51
PDB1YBR221C CAB2P40506 365 aa5.64□□□□□ -1.51
PDB1YBR221C SLS1P42900 643 aa5.64□□□□□ -1.51
PDB1YBR221C ELP2P42935 788 aa5.64□□□□□ -1.51
PDB1YBR221C YFH7P43591 353 aa5.64□□□□□ -1.51
PDB1YBR221C DLD2P46681 530 aaKnown RBP5.64□□□□□ -1.51
PDB1YBR221C AAD10P47182 288 aa5.64□□□□□ -1.51
PDB1YBR221C APT1P49435 187 aaKnown RBP5.64□□□□□ -1.51
PDB1YBR221C MNT2P53059 558 aa5.64□□□□□ -1.51
PDB1YBR221C COG1P53079 417 aa5.64□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 19.3 ms