RNA–Protein interactions for RNA: ENST00000590239.5

DDX39A-211, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 565 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-211ENST00000590239 PROCA1Q8NCQ7 364 aaPredicted RBP17.57■□□□□ 0.4
DDX39A-211ENST00000590239 UBA5Q9GZZ9 404 aa17.57■□□□□ 0.4
DDX39A-211ENST00000590239 PCDH10Q9P2E7 1040 aa17.57■□□□□ 0.4
DDX39A-211ENST00000590239 TLL2Q9Y6L7 1015 aa17.57■□□□□ 0.4
DDX39A-211ENST00000590239 CAPN15O75808 1086 aa17.56■□□□□ 0.4
DDX39A-211ENST00000590239 SLC16A2P36021 539 aa17.56■□□□□ 0.4
DDX39A-211ENST00000590239 SYDE2Q5VT97 1194 aa17.56■□□□□ 0.4
DDX39A-211ENST00000590239 SPRYD7Q5W111 196 aa17.56■□□□□ 0.4
DDX39A-211ENST00000590239 FASTKD5Q7L8L6 764 aaKnown RBP17.56■□□□□ 0.4
DDX39A-211ENST00000590239 ADGRF4Q8IZF3 695 aa17.56■□□□□ 0.4
DDX39A-211ENST00000590239 RGS22Q8NE09 1264 aa17.56■□□□□ 0.4
DDX39A-211ENST00000590239 MTMR8Q96EF0 704 aa17.56■□□□□ 0.4
DDX39A-211ENST00000590239 RRP36Q96EU6 259 aaKnown RBP17.56■□□□□ 0.4
DDX39A-211ENST00000590239 HHIPL1Q96JK4 782 aa17.56■□□□□ 0.4
DDX39A-211ENST00000590239 RPAP3Q9H6T3 665 aaPredicted RBP17.56■□□□□ 0.4
DDX39A-211ENST00000590239 DTNBO60941 627 aa17.55■□□□□ 0.4
DDX39A-211ENST00000590239 GTF2A2P52657 109 aa17.55■□□□□ 0.4
DDX39A-211ENST00000590239 IKQ13123 557 aaPredicted RBP17.55■□□□□ 0.4
DDX39A-211ENST00000590239 DGKZQ13574 1117 aa17.55■□□□□ 0.4
DDX39A-211ENST00000590239 RGMBQ6NW40 437 aa17.55■□□□□ 0.4
DDX39A-211ENST00000590239 JMYQ8N9B5 988 aa17.55■□□□□ 0.4
DDX39A-211ENST00000590239 TANGO6Q9C0B7 1094 aa17.55■□□□□ 0.4
DDX39A-211ENST00000590239 CPVLQ9H3G5 476 aa17.55■□□□□ 0.4
DDX39A-211ENST00000590239 JMJD4Q9H9V9 463 aa17.55■□□□□ 0.4
DDX39A-211ENST00000590239 SEC63Q9UGP8 760 aaKnown RBP17.55■□□□□ 0.4
DDX39A-211ENST00000590239 CIZ1Q9ULV3 898 aaPredicted RBP17.55■□□□□ 0.4
DDX39A-211ENST00000590239 PTPRFP10586 1907 aa17.55■□□□□ 0.4
DDX39A-211ENST00000590239 LOC285556D6RIA3 1793 aa17.54■□□□□ 0.4
DDX39A-211ENST00000590239 USP17L15C9J2P7 530 aa17.54■□□□□ 0.4
DDX39A-211ENST00000590239 USP17L13C9JLJ4 530 aa17.54■□□□□ 0.4
DDX39A-211ENST00000590239 USP17L11C9JVI0 530 aa17.54■□□□□ 0.4
DDX39A-211ENST00000590239 USP17L18D6R9N7 530 aa17.54■□□□□ 0.4
DDX39A-211ENST00000590239 USP17L22D6RA61 530 aa17.54■□□□□ 0.4
DDX39A-211ENST00000590239 USP17L17D6RBQ6 530 aa17.54■□□□□ 0.4
DDX39A-211ENST00000590239 USP17L19D6RCP7 530 aa17.54■□□□□ 0.4
DDX39A-211ENST00000590239 USP17L20D6RJB6 530 aa17.54■□□□□ 0.4
DDX39A-211ENST00000590239 PPFIA3O75145 1194 aa17.54■□□□□ 0.4
DDX39A-211ENST00000590239 CETPP11597 493 aa17.54■□□□□ 0.4
DDX39A-211ENST00000590239 ZNF157P51786 506 aaPredicted RBP17.54■□□□□ 0.4
DDX39A-211ENST00000590239 USP17L24Q0WX57 530 aa17.54■□□□□ 0.4
DDX39A-211ENST00000590239 PKN1Q16512 942 aa17.54■□□□□ 0.4
DDX39A-211ENST00000590239 PFKFB3Q16875 520 aaPredicted RBP17.54■□□□□ 0.4
DDX39A-211ENST00000590239 TNS4Q8IZW8 715 aa17.54■□□□□ 0.4
DDX39A-211ENST00000590239 PRPF38AQ8NAV1 312 aaKnown RBP17.54■□□□□ 0.4
DDX39A-211ENST00000590239 SLF1Q9BQI6 1058 aa17.54■□□□□ 0.4
DDX39A-211ENST00000590239 ALG1Q9BT22 464 aa17.54■□□□□ 0.4
DDX39A-211ENST00000590239 VAT1LQ9HCJ6 419 aa17.54■□□□□ 0.4
DDX39A-211ENST00000590239 PRR12Q9ULL5 1215 aa17.54■□□□□ 0.4
DDX39A-211ENST00000590239 PNMA6FA0A0J9YX94 578 aa17.53■□□□□ 0.4
DDX39A-211ENST00000590239 FDX1P10109 184 aa17.53■□□□□ 0.4
DDX39A-211ENST00000590239 SCG2P13521 617 aa17.53■□□□□ 0.4
DDX39A-211ENST00000590239 HOXA7P31268 230 aaPredicted RBP17.53■□□□□ 0.4
DDX39A-211ENST00000590239 MOGSQ13724 837 aa17.53■□□□□ 0.4
DDX39A-211ENST00000590239 LARP1BQ659C4 914 aaKnown RBP17.53■□□□□ 0.4
DDX39A-211ENST00000590239 GADL1Q6ZQY3 521 aa17.53■□□□□ 0.4
DDX39A-211ENST00000590239 CATSPERGQ6ZRH7 1159 aa17.53■□□□□ 0.4
DDX39A-211ENST00000590239 RASAL3Q86YV0 1011 aa17.53■□□□□ 0.4
DDX39A-211ENST00000590239 FAM177A1Q8N128 213 aaPredicted RBP17.53■□□□□ 0.4
DDX39A-211ENST00000590239 CCDC102AQ96A19 550 aa17.53■□□□□ 0.4
DDX39A-211ENST00000590239 MS4A4AQ96JQ5 239 aa17.53■□□□□ 0.4
DDX39A-211ENST00000590239 PIGSQ96S52 555 aa17.53■□□□□ 0.4
DDX39A-211ENST00000590239 FBXO28Q9NVF7 368 aa17.53■□□□□ 0.4
DDX39A-211ENST00000590239 ABT1Q9ULW3 272 aaKnown RBP17.53■□□□□ 0.4
DDX39A-211ENST00000590239 AGTPBP1Q9UPW5 1226 aa17.53■□□□□ 0.4
DDX39A-211ENST00000590239 MYPNQ86TC9 1320 aa17.52■□□□□ 0.4
DDX39A-211ENST00000590239 hCG_1642624A0A1W2PR95 340 aa17.52■□□□□ 0.4
DDX39A-211ENST00000590239 hCG_1984214I3L0E3 225 aa17.52■□□□□ 0.4
DDX39A-211ENST00000590239 ZBTB5O15062 677 aa17.52■□□□□ 0.4
DDX39A-211ENST00000590239 FLOT1O75955 427 aa17.52■□□□□ 0.4
DDX39A-211ENST00000590239 SYT1P21579 422 aa17.52■□□□□ 0.4
DDX39A-211ENST00000590239 PABPC4Q13310 644 aaKnown RBP eCLIP17.52■□□□□ 0.4
DDX39A-211ENST00000590239 COG2Q14746 738 aa17.52■□□□□ 0.4
DDX39A-211ENST00000590239 ZNF713Q8N859 430 aaPredicted RBP17.52■□□□□ 0.4
DDX39A-211ENST00000590239 PIBF1Q8WXW3 757 aa17.52■□□□□ 0.4
DDX39A-211ENST00000590239 KIFC2Q96AC6 838 aa17.52■□□□□ 0.4
DDX39A-211ENST00000590239 SH3GLB2Q9NR46 395 aa17.52■□□□□ 0.4
DDX39A-211ENST00000590239 PPP1R9AQ9ULJ8 1098 aa17.52■□□□□ 0.4
DDX39A-211ENST00000590239 SLC10A3P09131 477 aa17.51■□□□□ 0.39
DDX39A-211ENST00000590239 XBP1P17861 261 aa17.51■□□□□ 0.39
DDX39A-211ENST00000590239 TRAF1Q13077 416 aa17.51■□□□□ 0.39
DDX39A-211ENST00000590239 TREML2Q5T2D2 321 aa17.51■□□□□ 0.39
DDX39A-211ENST00000590239 HOMER1Q86YM7 354 aa17.51■□□□□ 0.39
DDX39A-211ENST00000590239 C8orf76Q96K31 380 aa17.51■□□□□ 0.39
DDX39A-211ENST00000590239 AIFM3Q96NN9 605 aa17.51■□□□□ 0.39
DDX39A-211ENST00000590239 RANBP17Q9H2T7 1088 aaKnown RBP17.51■□□□□ 0.39
DDX39A-211ENST00000590239 HOXC10Q9NYD6 342 aa17.51■□□□□ 0.39
DDX39A-211ENST00000590239 CHMP5Q9NZZ3 219 aa17.51■□□□□ 0.39
DDX39A-211ENST00000590239 BAZ2BQ9UIF8 2168 aaKnown RBP17.5■□□□□ 0.39
DDX39A-211ENST00000590239 STX6O43752 255 aa17.5■□□□□ 0.39
DDX39A-211ENST00000590239 DSG3P32926 999 aa17.5■□□□□ 0.39
DDX39A-211ENST00000590239 NUCB2P80303 420 aa17.5■□□□□ 0.39
DDX39A-211ENST00000590239 TRIM29Q14134 588 aa17.5■□□□□ 0.39
DDX39A-211ENST00000590239 CDC37Q16543 378 aaPredicted RBP17.5■□□□□ 0.39
DDX39A-211ENST00000590239 QRICH1Q2TAL8 776 aa17.5■□□□□ 0.39
DDX39A-211ENST00000590239 GPAT2Q6NUI2 795 aa17.5■□□□□ 0.39
DDX39A-211ENST00000590239 FBXO18Q8NFZ0 1043 aa17.5■□□□□ 0.39
DDX39A-211ENST00000590239 CREBZFQ9NS37 354 aa17.5■□□□□ 0.39
DDX39A-211ENST00000590239 BARHL2Q9NY43 387 aa17.5■□□□□ 0.39
DDX39A-211ENST00000590239 PNMA2Q9UL42 364 aa17.5■□□□□ 0.39
DDX39A-211ENST00000590239 ADAMTS5Q9UNA0 930 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms