RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 SMIM22K7EJ46 135 aa15.72■□□□□ 0.11
GTF3C1-203ENST00000562609 RASSF9O75901 435 aa15.72■□□□□ 0.11
GTF3C1-203ENST00000562609 KLRK1P26718 216 aa15.72■□□□□ 0.11
GTF3C1-203ENST00000562609 FOXP4Q8IVH2 680 aaPredicted RBP15.72■□□□□ 0.11
GTF3C1-203ENST00000562609 LCORLQ8N3X6 602 aa15.72■□□□□ 0.11
GTF3C1-203ENST00000562609 MYL10Q9BUA6 226 aa15.72■□□□□ 0.11
GTF3C1-203ENST00000562609 NAA15Q9BXJ9 866 aaKnown RBP15.72■□□□□ 0.11
GTF3C1-203ENST00000562609 TTF2Q9UNY4 1162 aaKnown RBP15.72■□□□□ 0.11
GTF3C1-203ENST00000562609 JAG2Q9Y219 1238 aa15.72■□□□□ 0.11
GTF3C1-203ENST00000562609 PCDHA5Q9Y5H7 936 aa15.72■□□□□ 0.11
GTF3C1-203ENST00000562609 FMR1Q06787 632 aaKnown RBP eCLIP15.71■□□□□ 0.111e-7■■■■□ 22.1
GTF3C1-203ENST00000562609 NAA25Q14CX7 972 aa15.71■□□□□ 0.11
GTF3C1-203ENST00000562609 ANO1Q5XXA6 986 aa15.71■□□□□ 0.11
GTF3C1-203ENST00000562609 ADGRA1Q86SQ6 560 aa15.71■□□□□ 0.11
GTF3C1-203ENST00000562609 TICAM2Q86XR7 235 aa15.71■□□□□ 0.11
GTF3C1-203ENST00000562609 SPATS2Q86XZ4 545 aaKnown RBP15.71■□□□□ 0.11
GTF3C1-203ENST00000562609 ZNF274Q96GC6 653 aaPredicted RBP15.71■□□□□ 0.11
GTF3C1-203ENST00000562609 VCPKMTQ9H867 229 aa15.71■□□□□ 0.11
GTF3C1-203ENST00000562609 ZNF18P17022 549 aa15.71■□□□□ 0.1
GTF3C1-203ENST00000562609 GRIK3Q13003 919 aa15.71■□□□□ 0.1
GTF3C1-203ENST00000562609 NR1I3Q14994 352 aa15.71■□□□□ 0.1
GTF3C1-203ENST00000562609 ZKSCAN8Q15776 578 aaPredicted RBP15.71■□□□□ 0.1
GTF3C1-203ENST00000562609 RRP12Q5JTH9 1297 aaKnown RBP15.71■□□□□ 0.1
GTF3C1-203ENST00000562609 CLEC4GQ6UXB4 293 aa15.71■□□□□ 0.1
GTF3C1-203ENST00000562609 CCDC13Q8IYE1 715 aa15.71■□□□□ 0.1
GTF3C1-203ENST00000562609 ZNF483Q8TF39 744 aaPredicted RBP15.71■□□□□ 0.1
GTF3C1-203ENST00000562609 HPS5Q9UPZ3 1129 aa15.71■□□□□ 0.1
GTF3C1-203ENST00000562609 TEX33O43247 280 aa15.7■□□□□ 0.1
GTF3C1-203ENST00000562609 ZEB2O60315 1214 aa15.7■□□□□ 0.1
GTF3C1-203ENST00000562609 PDHBP11177 359 aa15.7■□□□□ 0.1
GTF3C1-203ENST00000562609 METTL16Q86W50 562 aaKnown RBP15.7■□□□□ 0.1
GTF3C1-203ENST00000562609 NBPF5PQ86XG9 351 aaPredicted RBP15.7■□□□□ 0.1
GTF3C1-203ENST00000562609 IFNL3Q8IZI9 196 aa15.7■□□□□ 0.1
GTF3C1-203ENST00000562609 FNBP4Q8N3X1 1017 aaPredicted RBP15.7■□□□□ 0.1
GTF3C1-203ENST00000562609 MMS19Q96T76 1030 aa15.7■□□□□ 0.1
GTF3C1-203ENST00000562609 ZKSCAN3Q9BRR0 538 aa15.7■□□□□ 0.1
GTF3C1-203ENST00000562609 SLC40A1Q9NP59 571 aa15.7■□□□□ 0.1
GTF3C1-203ENST00000562609 SAMSN1Q9NSI8 373 aaKnown RBP15.7■□□□□ 0.1
GTF3C1-203ENST00000562609 TACC3Q9Y6A5 838 aa15.7■□□□□ 0.1
GTF3C1-203ENST00000562609 ZPR1O75312 459 aa15.7■□□□□ 0.1
GTF3C1-203ENST00000562609 SNCBQ16143 134 aa15.7■□□□□ 0.1
GTF3C1-203ENST00000562609 MICALCLQ6ZW33 695 aa15.7■□□□□ 0.1
GTF3C1-203ENST00000562609 SETDB2Q96T68 719 aa15.7■□□□□ 0.1
GTF3C1-203ENST00000562609 HINFPQ9BQA5 517 aa15.7■□□□□ 0.1
GTF3C1-203ENST00000562609 NAPBQ9H115 298 aa15.7■□□□□ 0.1
GTF3C1-203ENST00000562609 SH3BP1Q9Y3L3 701 aa15.7■□□□□ 0.1
GTF3C1-203ENST00000562609 ENC1O14682 589 aa15.69■□□□□ 0.1
GTF3C1-203ENST00000562609 SSBP05455 408 aaKnown RBP eCLIP15.69■□□□□ 0.1
GTF3C1-203ENST00000562609 EZRP15311 586 aaKnown RBP15.69■□□□□ 0.1
GTF3C1-203ENST00000562609 SF3B2Q13435 895 aaKnown RBP15.69■□□□□ 0.1
GTF3C1-203ENST00000562609 E2F5Q15329 346 aa15.69■□□□□ 0.1
GTF3C1-203ENST00000562609 MEX3CQ5U5Q3 659 aaKnown RBP15.69■□□□□ 0.1
GTF3C1-203ENST00000562609 VPS37DQ86XT2 251 aa15.69■□□□□ 0.1
GTF3C1-203ENST00000562609 SDR42E1Q8WUS8 393 aa15.69■□□□□ 0.1
GTF3C1-203ENST00000562609 C8orf76Q96K31 380 aa15.69■□□□□ 0.1
GTF3C1-203ENST00000562609 AIFM3Q96NN9 605 aa15.69■□□□□ 0.1
GTF3C1-203ENST00000562609 HDAC6Q9UBN7 1215 aa15.69■□□□□ 0.1
GTF3C1-203ENST00000562609 MINPP1Q9UNW1 487 aa15.69■□□□□ 0.1
GTF3C1-203ENST00000562609 GOLGA8KD6RF30 607 aa15.69■□□□□ 0.1
GTF3C1-203ENST00000562609 GCKP35557 465 aa15.69■□□□□ 0.1
GTF3C1-203ENST00000562609 CCNI2Q6ZMN8 369 aaPredicted RBP15.69■□□□□ 0.1
GTF3C1-203ENST00000562609 MICU3Q86XE3 530 aa15.69■□□□□ 0.1
GTF3C1-203ENST00000562609 ARHGEF1Q92888 912 aaKnown RBP15.69■□□□□ 0.1
GTF3C1-203ENST00000562609 SCLT1Q96NL6 688 aa15.69■□□□□ 0.1
GTF3C1-203ENST00000562609 SLC4A4Q9Y6R1 1079 aa15.69■□□□□ 0.1
GTF3C1-203ENST00000562609 TARSL2A2RTX5 802 aaKnown RBP15.68■□□□□ 0.1
GTF3C1-203ENST00000562609 EME2A4GXA9 379 aaPredicted RBP15.68■□□□□ 0.1
GTF3C1-203ENST00000562609 GSG1L2A8MUP6 293 aa15.68■□□□□ 0.1
GTF3C1-203ENST00000562609 UBE2Q2LH0YL09 131 aa15.68■□□□□ 0.1
GTF3C1-203ENST00000562609 CPLX1O14810 134 aa15.68■□□□□ 0.1
GTF3C1-203ENST00000562609 LONRF3Q496Y0 759 aa15.68■□□□□ 0.1
GTF3C1-203ENST00000562609 AP1ARQ63HQ0 302 aa15.68■□□□□ 0.1
GTF3C1-203ENST00000562609 SHC4Q6S5L8 630 aa15.68■□□□□ 0.1
GTF3C1-203ENST00000562609 ARMC2Q8NEN0 867 aa15.68■□□□□ 0.1
GTF3C1-203ENST00000562609 CAPZA3Q96KX2 299 aa15.68■□□□□ 0.1
GTF3C1-203ENST00000562609 TFCP2L1Q9NZI6 479 aa15.68■□□□□ 0.1
GTF3C1-203ENST00000562609 LRP5O75197 1615 aa15.68■□□□□ 0.1
GTF3C1-203ENST00000562609 RPSAP08865 295 aaKnown RBP15.68■□□□□ 0.1
GTF3C1-203ENST00000562609 ATP1A2P50993 1020 aa15.68■□□□□ 0.1
GTF3C1-203ENST00000562609 NAP1L1P55209 391 aaKnown RBP15.68■□□□□ 0.1
GTF3C1-203ENST00000562609 YTHDF3Q7Z739 585 aaKnown RBP15.68■□□□□ 0.1
GTF3C1-203ENST00000562609 HPSEQ9Y251 543 aa15.68■□□□□ 0.1
GTF3C1-203ENST00000562609 COL5A3P25940 1745 aaPredicted RBP15.68■□□□□ 0.1
GTF3C1-203ENST00000562609 FOXN1O15353 648 aa15.67■□□□□ 0.1
GTF3C1-203ENST00000562609 SRGAP2O75044 1071 aa15.67■□□□□ 0.1
GTF3C1-203ENST00000562609 CYP7A1P22680 504 aa15.67■□□□□ 0.1
GTF3C1-203ENST00000562609 POLD4Q9HCU8 107 aa15.67■□□□□ 0.1
GTF3C1-203ENST00000562609 MYO1AQ9UBC5 1043 aa15.67■□□□□ 0.1
GTF3C1-203ENST00000562609 NARFQ9UHQ1 456 aa15.67■□□□□ 0.1
GTF3C1-203ENST00000562609 RTCBQ9Y3I0 505 aaKnown RBP15.67■□□□□ 0.1
GTF3C1-203ENST00000562609 KIF28PB7ZC32 967 aa15.67■□□□□ 0.1
GTF3C1-203ENST00000562609 RPS6KA4O75676 772 aa15.67■□□□□ 0.1
GTF3C1-203ENST00000562609 CASP14P31944 242 aa15.67■□□□□ 0.1
GTF3C1-203ENST00000562609 SKOR1P84550 965 aa15.67■□□□□ 0.1
GTF3C1-203ENST00000562609 ZNF827Q17R98 1081 aa15.67■□□□□ 0.1
GTF3C1-203ENST00000562609 NAA35Q5VZE5 725 aa15.67■□□□□ 0.1
GTF3C1-203ENST00000562609 SND1Q7KZF4 910 aaKnown RBP eCLIP15.67■□□□□ 0.12e-6■□□□□ 8.2
GTF3C1-203ENST00000562609 TRAPPC11Q7Z392 1133 aa15.67■□□□□ 0.1
GTF3C1-203ENST00000562609 PARP9Q8IXQ6 854 aa15.67■□□□□ 0.1
GTF3C1-203ENST00000562609 PHKBQ93100 1093 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms