RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 DHRS4Q9BTZ2 278 aa2.58□□□□□ -2
HIF1A-212ENST00000557538 ATG3Q9NT62 314 aa2.58□□□□□ -2
HIF1A-212ENST00000557538 PITPNM2Q9BZ72 1349 aa2.57□□□□□ -2
HIF1A-212ENST00000557538 AGRPO00253 132 aa2.57□□□□□ -2
HIF1A-212ENST00000557538 FOSL1P15407 271 aa2.57□□□□□ -2
HIF1A-212ENST00000557538 POLR2BP30876 1174 aaKnown RBP2.57□□□□□ -2
HIF1A-212ENST00000557538 TNK2Q07912 1038 aa2.57□□□□□ -2
HIF1A-212ENST00000557538 NKPD1Q17RQ9 610 aa2.57□□□□□ -2
HIF1A-212ENST00000557538 MSMPQ1L6U9 139 aa2.57□□□□□ -2
HIF1A-212ENST00000557538 FBXW10Q5XX13 1052 aa2.57□□□□□ -2
HIF1A-212ENST00000557538 KIF18BQ86Y91 864 aa2.57□□□□□ -2
HIF1A-212ENST00000557538 WFDC3Q8IUB2 231 aa2.57□□□□□ -2
HIF1A-212ENST00000557538 SPACA3Q8IXA5 215 aa2.57□□□□□ -2
HIF1A-212ENST00000557538 CCDC144CPQ8IYA2 1237 aa2.57□□□□□ -2
HIF1A-212ENST00000557538 FAM177A1Q8N128 213 aaPredicted RBP2.57□□□□□ -2
HIF1A-212ENST00000557538 MFSD4AQ8N468 514 aa2.57□□□□□ -2
HIF1A-212ENST00000557538 NPLOC4Q8TAT6 608 aa2.57□□□□□ -2
HIF1A-212ENST00000557538 PUS7Q96PZ0 661 aaKnown RBP2.57□□□□□ -2
HIF1A-212ENST00000557538 EFCAB14O75071 495 aa2.57□□□□□ -2
HIF1A-212ENST00000557538 SPINK2P20155 84 aa2.57□□□□□ -2
HIF1A-212ENST00000557538 NOP2P46087 812 aaKnown RBP2.57□□□□□ -2
HIF1A-212ENST00000557538 CEBPAP49715 358 aaPredicted RBP2.57□□□□□ -2
HIF1A-212ENST00000557538 GFRA1P56159 465 aa2.57□□□□□ -2
HIF1A-212ENST00000557538 NFKBIBQ15653 356 aa2.57□□□□□ -2
HIF1A-212ENST00000557538 LARP1BQ659C4 914 aaKnown RBP2.57□□□□□ -2
HIF1A-212ENST00000557538 CDH24Q86UP0 819 aa2.57□□□□□ -2
HIF1A-212ENST00000557538 FEZ1Q99689 392 aa2.57□□□□□ -2
HIF1A-212ENST00000557538 SLC12A9Q9BXP2 914 aa2.57□□□□□ -2
HIF1A-212ENST00000557538 CHST7Q9NS84 486 aa2.57□□□□□ -2
HIF1A-212ENST00000557538 PIM2Q9P1W9 311 aa2.57□□□□□ -2
HIF1A-212ENST00000557538 DAGLAQ9Y4D2 1042 aa2.57□□□□□ -2
HIF1A-212ENST00000557538 KDM2BQ8NHM5 1336 aa2.57□□□□□ -2
HIF1A-212ENST00000557538 HMX2A2RU54 273 aa2.56□□□□□ -2
HIF1A-212ENST00000557538 DIAPH1O60610 1272 aaKnown RBP2.56□□□□□ -2
HIF1A-212ENST00000557538 ITGAVP06756 1048 aa2.56□□□□□ -2
HIF1A-212ENST00000557538 EPHX1P07099 455 aa2.56□□□□□ -2
HIF1A-212ENST00000557538 FAM153BP0C7A2 387 aa2.56□□□□□ -2
HIF1A-212ENST00000557538 NAT1P18440 290 aa2.56□□□□□ -2
HIF1A-212ENST00000557538 CDK5R2Q13319 367 aa2.56□□□□□ -2
HIF1A-212ENST00000557538 BMS1Q14692 1282 aaKnown RBP2.56□□□□□ -2
HIF1A-212ENST00000557538 MTERF2Q49AM1 385 aa2.56□□□□□ -2
HIF1A-212ENST00000557538 MAMDC2Q7Z304 686 aaPredicted RBP2.56□□□□□ -2
HIF1A-212ENST00000557538 USHBP1Q8N6Y0 703 aa2.56□□□□□ -2
HIF1A-212ENST00000557538 KREMEN2Q8NCW0 462 aa2.56□□□□□ -2
HIF1A-212ENST00000557538 KRTAP4-8Q9BYQ9 185 aa2.56□□□□□ -2
HIF1A-212ENST00000557538 CGGBP1Q9UFW8 167 aaPredicted RBP2.56□□□□□ -2
HIF1A-212ENST00000557538 TRBV23OR9-2A0A075B6M9 112 aa2.56□□□□□ -2
HIF1A-212ENST00000557538 B2RBV5 119 aa2.56□□□□□ -2
HIF1A-212ENST00000557538 AURKAO14965 403 aa2.56□□□□□ -2
HIF1A-212ENST00000557538 CEACAM5P06731 702 aa2.56□□□□□ -2
HIF1A-212ENST00000557538 C6orf222P0C671 652 aaPredicted RBP2.56□□□□□ -2
HIF1A-212ENST00000557538 ITIH2P19823 946 aa2.56□□□□□ -2
HIF1A-212ENST00000557538 NMIQ13287 307 aaPredicted RBP2.56□□□□□ -2
HIF1A-212ENST00000557538 TCEA2Q15560 299 aa2.56□□□□□ -2
HIF1A-212ENST00000557538 TM4SF20Q53R12 229 aa2.56□□□□□ -2
HIF1A-212ENST00000557538 STYK1Q6J9G0 422 aa2.56□□□□□ -2
HIF1A-212ENST00000557538 PUM2Q8TB72 1066 aaKnown RBP eCLIP2.56□□□□□ -2
HIF1A-212ENST00000557538 SHKBP1Q8TBC3 707 aa2.56□□□□□ -2
HIF1A-212ENST00000557538 NETO1Q8TDF5 533 aa2.56□□□□□ -2
HIF1A-212ENST00000557538 NINJ1Q92982 152 aa2.56□□□□□ -2
HIF1A-212ENST00000557538 CCDC120Q96HB5 630 aa2.56□□□□□ -2
HIF1A-212ENST00000557538 TBC1D32Q96NH3 1257 aa2.56□□□□□ -2
HIF1A-212ENST00000557538 PTCH2Q9Y6C5 1203 aa2.56□□□□□ -2
HIF1A-212ENST00000557538 DDAH1O94760 285 aa2.56□□□□□ -2
HIF1A-212ENST00000557538 CLSTN1O94985 981 aa2.56□□□□□ -2
HIF1A-212ENST00000557538 PABPC1P11940 636 aaKnown RBP2.56□□□□□ -2
HIF1A-212ENST00000557538 VAV1P15498 845 aa2.56□□□□□ -2
HIF1A-212ENST00000557538 KIR2DL1P43626 348 aaPredicted RBP2.56□□□□□ -2
HIF1A-212ENST00000557538 KIR2DL2P43627 348 aaPredicted RBP2.56□□□□□ -2
HIF1A-212ENST00000557538 CORO7P57737 925 aa2.56□□□□□ -2
HIF1A-212ENST00000557538 NR0B2Q15466 257 aa2.56□□□□□ -2
HIF1A-212ENST00000557538 KCNF1Q9H3M0 494 aa2.56□□□□□ -2
HIF1A-212ENST00000557538 CDC45O75419 566 aa2.55□□□□□ -2
HIF1A-212ENST00000557538 PRAMEF1O95521 474 aa2.55□□□□□ -2
HIF1A-212ENST00000557538 NCLP19338 710 aaKnown RBP2.55□□□□□ -2
HIF1A-212ENST00000557538 CTSKP43235 329 aa2.55□□□□□ -2
HIF1A-212ENST00000557538 GABREP78334 506 aa2.55□□□□□ -2
HIF1A-212ENST00000557538 SSRP1Q08945 709 aaKnown RBP2.55□□□□□ -2
HIF1A-212ENST00000557538 HABP4Q5JVS0 413 aaKnown RBP2.55□□□□□ -2
HIF1A-212ENST00000557538 SPATC1Q76KD6 591 aa2.55□□□□□ -2
HIF1A-212ENST00000557538 LINC01599Q8WXQ3 324 aa2.55□□□□□ -2
HIF1A-212ENST00000557538 TYW1Q9NV66 732 aaKnown RBP2.55□□□□□ -2
HIF1A-212ENST00000557538 BSDC1Q9NW68 430 aaPredicted RBP2.55□□□□□ -2
HIF1A-212ENST00000557538 GPATCH2Q9NW75 528 aa2.55□□□□□ -2
HIF1A-212ENST00000557538 SBNO2Q9Y2G9 1366 aa2.55□□□□□ -2
HIF1A-212ENST00000557538 TRBV23-1A0A0A0MS06 115 aa2.55□□□□□ -2
HIF1A-212ENST00000557538 GNAT3A8MTJ3 354 aa2.55□□□□□ -2
HIF1A-212ENST00000557538 FGF10O15520 208 aaPredicted RBP2.55□□□□□ -2
HIF1A-212ENST00000557538 DLX3O60479 287 aa2.55□□□□□ -2
HIF1A-212ENST00000557538 RXRBP28702 533 aa2.55□□□□□ -2
HIF1A-212ENST00000557538 PPP2R5EQ16537 467 aa2.55□□□□□ -2
HIF1A-212ENST00000557538 TAF7LQ5H9L4 462 aa2.55□□□□□ -2
HIF1A-212ENST00000557538 GTF2IRD2BQ6EKJ0 949 aa2.55□□□□□ -2
HIF1A-212ENST00000557538 CYP2R1Q6VVX0 501 aa2.55□□□□□ -2
HIF1A-212ENST00000557538 GTF2IRD2Q86UP8 949 aa2.55□□□□□ -2
HIF1A-212ENST00000557538 SHISA5Q8N114 240 aa2.55□□□□□ -2
HIF1A-212ENST00000557538 DCAF4Q8WV16 495 aa2.55□□□□□ -2
HIF1A-212ENST00000557538 ASB11Q8WXH4 323 aa2.55□□□□□ -2
HIF1A-212ENST00000557538 EXOC2Q96KP1 924 aa2.55□□□□□ -2
HIF1A-212ENST00000557538 DPH2Q9BQC3 489 aaPredicted RBP2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms