RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 BANK1Q8NDB2 785 aa14.01□□□□□ -0.17
RTN4-211ENST00000438462 TINF2Q9BSI4 451 aa14.01□□□□□ -0.17
RTN4-211ENST00000438462 TRPV6Q9H1D0 765 aa14.01□□□□□ -0.17
RTN4-211ENST00000438462 ATG2AQ2TAZ0 1938 aa14.01□□□□□ -0.17
RTN4-211ENST00000438462 GDF11O95390 407 aa14□□□□□ -0.17
RTN4-211ENST00000438462 BTDP43251 543 aa14□□□□□ -0.17
RTN4-211ENST00000438462 SMAD4Q13485 552 aaKnown RBP14□□□□□ -0.17
RTN4-211ENST00000438462 SHCBP1Q8NEM2 672 aa14□□□□□ -0.17
RTN4-211ENST00000438462 KCNG4Q8TDN1 519 aa14□□□□□ -0.17
RTN4-211ENST00000438462 C12orf42Q96LP6 360 aa14□□□□□ -0.17
RTN4-211ENST00000438462 MBIPQ9NS73 344 aa14□□□□□ -0.17
RTN4-211ENST00000438462 TNKSO95271 1327 aa13.99□□□□□ -0.17
RTN4-211ENST00000438462 LINC01553A4QN01 128 aa13.99□□□□□ -0.17
RTN4-211ENST00000438462 SOBPA7XYQ1 873 aa13.99□□□□□ -0.17
RTN4-211ENST00000438462 PTPROQ16827 1216 aa13.99□□□□□ -0.17
RTN4-211ENST00000438462 ABRAQ8N0Z2 381 aa13.99□□□□□ -0.17
RTN4-211ENST00000438462 SLC43A3Q8NBI5 491 aa13.99□□□□□ -0.17
RTN4-211ENST00000438462 FBXO22Q8NEZ5 403 aa13.99□□□□□ -0.17
RTN4-211ENST00000438462 ZBED2Q9BTP6 218 aa13.99□□□□□ -0.17
RTN4-211ENST00000438462 SPATC1LQ9H0A9 340 aa13.99□□□□□ -0.17
RTN4-211ENST00000438462 HERC5Q9UII4 1024 aaKnown RBP13.99□□□□□ -0.17
RTN4-211ENST00000438462 CNPY2Q9Y2B0 182 aa13.99□□□□□ -0.17
RTN4-211ENST00000438462 DUSP11O75319 330 aaKnown RBP13.98□□□□□ -0.17
RTN4-211ENST00000438462 VCAM1P19320 739 aa13.98□□□□□ -0.17
RTN4-211ENST00000438462 DLX2Q07687 328 aaPredicted RBP13.98□□□□□ -0.17
RTN4-211ENST00000438462 NEUROD2Q15784 382 aa13.98□□□□□ -0.17
RTN4-211ENST00000438462 KIAA0319Q5VV43 1072 aa13.98□□□□□ -0.17
RTN4-211ENST00000438462 RIPOR3Q96MK2 946 aa13.98□□□□□ -0.17
RTN4-211ENST00000438462 FEZ1Q99689 392 aa13.98□□□□□ -0.17
RTN4-211ENST00000438462 HINFPQ9BQA5 517 aa13.98□□□□□ -0.17
RTN4-211ENST00000438462 ASH1LQ9NR48 2969 aaKnown RBP13.98□□□□□ -0.17
RTN4-211ENST00000438462 CTNNA3Q9UI47 895 aa13.98□□□□□ -0.17
RTN4-211ENST00000438462 FAM184BQ9ULE4 1060 aa13.98□□□□□ -0.17
RTN4-211ENST00000438462 ZBTB21Q9ULJ3 1066 aa13.98□□□□□ -0.17
RTN4-211ENST00000438462 A0A1B0GUL7 405 aa13.97□□□□□ -0.17
RTN4-211ENST00000438462 LOC730098B7Z3J9 87 aa13.97□□□□□ -0.17
RTN4-211ENST00000438462 ADCY6O43306 1168 aa13.97□□□□□ -0.17
RTN4-211ENST00000438462 PGK2P07205 417 aa13.97□□□□□ -0.17
RTN4-211ENST00000438462 KCNJ6P48051 423 aa13.97□□□□□ -0.17
RTN4-211ENST00000438462 GNASQ5JWF2 1037 aa13.97□□□□□ -0.17
RTN4-211ENST00000438462 METTL24Q5JXM2 366 aa13.97□□□□□ -0.17
RTN4-211ENST00000438462 NCAPG2Q86XI2 1143 aa13.97□□□□□ -0.17
RTN4-211ENST00000438462 C17orf80Q9BSJ5 609 aa13.97□□□□□ -0.17
RTN4-211ENST00000438462 ZHX1Q9UKY1 873 aaPredicted RBP13.97□□□□□ -0.17
RTN4-211ENST00000438462 MAST4O15021 2626 aa13.97□□□□□ -0.17
RTN4-211ENST00000438462 KIF16BQ96L93 1317 aa13.96□□□□□ -0.17
RTN4-211ENST00000438462 LMNAP02545 664 aaKnown RBP13.96□□□□□ -0.17
RTN4-211ENST00000438462 ADRB1P08588 477 aa13.96□□□□□ -0.17
RTN4-211ENST00000438462 DMWDQ09019 674 aa13.96□□□□□ -0.17
RTN4-211ENST00000438462 COL9A3Q14050 684 aaPredicted RBP13.96□□□□□ -0.17
RTN4-211ENST00000438462 VGLL2Q8N8G2 317 aa13.96□□□□□ -0.17
RTN4-211ENST00000438462 UPF3AQ9H1J1 476 aaKnown RBP13.96□□□□□ -0.17
RTN4-211ENST00000438462 NSUN3Q9H649 340 aaKnown RBP13.96□□□□□ -0.17
RTN4-211ENST00000438462 SPC25Q9HBM1 224 aa13.96□□□□□ -0.17
RTN4-211ENST00000438462 SPEGQ15772 3267 aa13.95□□□□□ -0.18
RTN4-211ENST00000438462 TBX10O75333 385 aa13.95□□□□□ -0.18
RTN4-211ENST00000438462 BAIAP3O94812 1187 aa13.95□□□□□ -0.18
RTN4-211ENST00000438462 FCER1AP12319 257 aa13.95□□□□□ -0.18
RTN4-211ENST00000438462 GJA9P57773 515 aa13.95□□□□□ -0.18
RTN4-211ENST00000438462 RHBDL3P58872 404 aa13.95□□□□□ -0.18
RTN4-211ENST00000438462 ITGA7Q13683 1181 aa13.95□□□□□ -0.18
RTN4-211ENST00000438462 CBX2Q14781 532 aaPredicted RBP13.95□□□□□ -0.18
RTN4-211ENST00000438462 CCDC30Q5VVM6 783 aa13.95□□□□□ -0.18
RTN4-211ENST00000438462 FTOQ9C0B1 505 aaKnown RBP eCLIP13.95□□□□□ -0.18
RTN4-211ENST00000438462 MROH8Q9H579 483 aa13.95□□□□□ -0.18
RTN4-211ENST00000438462 RPAP3Q9H6T3 665 aaPredicted RBP13.95□□□□□ -0.18
RTN4-211ENST00000438462 DNAJC18Q9H819 358 aa13.95□□□□□ -0.18
RTN4-211ENST00000438462 PCDHGC5Q9Y5F6 944 aa13.95□□□□□ -0.18
RTN4-211ENST00000438462 GCN1Q92616 2671 aaKnown RBP13.95□□□□□ -0.18
RTN4-211ENST00000438462 FLNBO75369 2602 aaKnown RBP13.94□□□□□ -0.18
RTN4-211ENST00000438462 TET1Q8NFU7 2136 aa13.94□□□□□ -0.18
RTN4-211ENST00000438462 GRIN2DO15399 1336 aa13.94□□□□□ -0.18
RTN4-211ENST00000438462 SALL1Q9NSC2 1324 aa13.94□□□□□ -0.18
RTN4-211ENST00000438462 NPM3O75607 178 aaKnown RBP13.94□□□□□ -0.18
RTN4-211ENST00000438462 PDE8BO95263 885 aa13.94□□□□□ -0.18
RTN4-211ENST00000438462 WDR5P61964 334 aaKnown RBP13.94□□□□□ -0.18
RTN4-211ENST00000438462 DEFB103AP81534 67 aa13.94□□□□□ -0.18
RTN4-211ENST00000438462 PLS1Q14651 629 aa13.94□□□□□ -0.18
RTN4-211ENST00000438462 CTC1Q2NKJ3 1217 aa13.94□□□□□ -0.18
RTN4-211ENST00000438462 RALGAPA2Q2PPJ7 1873 aa13.94□□□□□ -0.18
RTN4-211ENST00000438462 LRRC24Q50LG9 513 aa13.94□□□□□ -0.18
RTN4-211ENST00000438462 CXCL17Q6UXB2 119 aa13.94□□□□□ -0.18
RTN4-211ENST00000438462 DZIP1Q86YF9 867 aaKnown RBP13.94□□□□□ -0.18
RTN4-211ENST00000438462 TRIM35Q9UPQ4 493 aa13.94□□□□□ -0.18
RTN4-211ENST00000438462 MROH7-TTC4A0A0A0MT08 1334 aa13.93□□□□□ -0.18
RTN4-211ENST00000438462 CTAGE5O15320 804 aa13.93□□□□□ -0.18
RTN4-211ENST00000438462 IFIT1P09914 478 aaKnown RBP13.93□□□□□ -0.18
RTN4-211ENST00000438462 CYP2C9P11712 490 aa13.93□□□□□ -0.18
RTN4-211ENST00000438462 RFC2P35250 354 aa13.93□□□□□ -0.18
RTN4-211ENST00000438462 ATXN1P54253 815 aaKnown RBP13.93□□□□□ -0.18
RTN4-211ENST00000438462 BEX3Q00994 111 aa13.93□□□□□ -0.18
RTN4-211ENST00000438462 PTPN21Q16825 1174 aa13.93□□□□□ -0.18
RTN4-211ENST00000438462 LINS1Q8NG48 757 aa13.93□□□□□ -0.18
RTN4-211ENST00000438462 CRBNQ96SW2 442 aa13.93□□□□□ -0.18
RTN4-211ENST00000438462 MMP19Q99542 508 aa13.93□□□□□ -0.18
RTN4-211ENST00000438462 CD207Q9UJ71 328 aa13.93□□□□□ -0.18
RTN4-211ENST00000438462 ZFYVE26Q68DK2 2539 aa13.93□□□□□ -0.18
RTN4-211ENST00000438462 ZNF792Q3KQV3 632 aa13.92□□□□□ -0.18
RTN4-211ENST00000438462 G2E3Q7L622 706 aa13.92□□□□□ -0.18
RTN4-211ENST00000438462 RAD9AQ99638 391 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms