RNA–Protein interactions for RNA: ENST00000412828.1

AC003087.1-201, humanhuman

TSL 3 BASIC

Gene AC003087.1, Length 499 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC003087.1-201ENST00000412828 VCAM1P19320 739 aa11.12□□□□□ -0.63
AC003087.1-201ENST00000412828 RFC2P35250 354 aa11.12□□□□□ -0.63
AC003087.1-201ENST00000412828 USP14P54578 494 aa11.12□□□□□ -0.63
AC003087.1-201ENST00000412828 GJA9P57773 515 aa11.12□□□□□ -0.63
AC003087.1-201ENST00000412828 RHBDL3P58872 404 aa11.12□□□□□ -0.63
AC003087.1-201ENST00000412828 IRX5P78411 483 aaPredicted RBP11.12□□□□□ -0.63
AC003087.1-201ENST00000412828 ZYXQ15942 572 aaKnown RBP11.12□□□□□ -0.63
AC003087.1-201ENST00000412828 CDCA7LQ96GN5 454 aa11.12□□□□□ -0.63
AC003087.1-201ENST00000412828 ZBED2Q9BTP6 218 aa11.12□□□□□ -0.63
AC003087.1-201ENST00000412828 UPF3AQ9H1J1 476 aaKnown RBP11.12□□□□□ -0.63
AC003087.1-201ENST00000412828 ZBTB21Q9ULJ3 1066 aa11.12□□□□□ -0.63
AC003087.1-201ENST00000412828 SMCHD1A6NHR9 2005 aa11.12□□□□□ -0.63
AC003087.1-201ENST00000412828 DMXL1Q9Y485 3027 aa11.11□□□□□ -0.63
AC003087.1-201ENST00000412828 TPRP12270 2363 aaKnown RBP11.11□□□□□ -0.63
AC003087.1-201ENST00000412828 CABYRO75952 493 aa11.11□□□□□ -0.63
AC003087.1-201ENST00000412828 MAP4K4O95819 1239 aaPredicted RBP11.11□□□□□ -0.63
AC003087.1-201ENST00000412828 FGFR2P21802 821 aa11.11□□□□□ -0.63
AC003087.1-201ENST00000412828 LTBRP36941 435 aa11.11□□□□□ -0.63
AC003087.1-201ENST00000412828 SMAD4Q13485 552 aaKnown RBP11.11□□□□□ -0.63
AC003087.1-201ENST00000412828 ITGA7Q13683 1181 aa11.11□□□□□ -0.63
AC003087.1-201ENST00000412828 PUM3Q15397 648 aaKnown RBP11.11□□□□□ -0.63
AC003087.1-201ENST00000412828 TCEAL5Q5H9L2 206 aa11.11□□□□□ -0.63
AC003087.1-201ENST00000412828 NCAPG2Q86XI2 1143 aa11.11□□□□□ -0.63
AC003087.1-201ENST00000412828 DZIP1Q86YF9 867 aaKnown RBP11.11□□□□□ -0.63
AC003087.1-201ENST00000412828 ZGPATQ8N5A5 531 aaKnown RBP11.11□□□□□ -0.63
AC003087.1-201ENST00000412828 FBXO22Q8NEZ5 403 aa11.11□□□□□ -0.63
AC003087.1-201ENST00000412828 RIPOR3Q96MK2 946 aa11.11□□□□□ -0.63
AC003087.1-201ENST00000412828 FEZ1Q99689 392 aa11.11□□□□□ -0.63
AC003087.1-201ENST00000412828 STK31Q9BXU1 1019 aa11.11□□□□□ -0.63
AC003087.1-201ENST00000412828 SIL1Q9H173 461 aa11.11□□□□□ -0.63
AC003087.1-201ENST00000412828 TRPV6Q9H1D0 765 aa11.11□□□□□ -0.63
AC003087.1-201ENST00000412828 RNF39Q9H2S5 420 aa11.11□□□□□ -0.63
AC003087.1-201ENST00000412828 HOXC10Q9NYD6 342 aa11.11□□□□□ -0.63
AC003087.1-201ENST00000412828 GVINP1Q7Z2Y8 2422 aa11.11□□□□□ -0.63
AC003087.1-201ENST00000412828 GPR75-ASB3A0A0A6YYF3 556 aa11.1□□□□□ -0.63
AC003087.1-201ENST00000412828 LINC01553A4QN01 128 aa11.1□□□□□ -0.63
AC003087.1-201ENST00000412828 LOC730098B7Z3J9 87 aa11.1□□□□□ -0.63
AC003087.1-201ENST00000412828 ZNF853P0CG23 659 aa11.1□□□□□ -0.63
AC003087.1-201ENST00000412828 KCNJ6P48051 423 aa11.1□□□□□ -0.63
AC003087.1-201ENST00000412828 COG2Q14746 738 aa11.1□□□□□ -0.63
AC003087.1-201ENST00000412828 SHROOM1Q2M3G4 852 aaPredicted RBP11.1□□□□□ -0.63
AC003087.1-201ENST00000412828 ZNF792Q3KQV3 632 aa11.1□□□□□ -0.63
AC003087.1-201ENST00000412828 KIAA0319Q5VV43 1072 aa11.1□□□□□ -0.63
AC003087.1-201ENST00000412828 MSL3Q8N5Y2 521 aaKnown RBP11.1□□□□□ -0.63
AC003087.1-201ENST00000412828 C8orf58Q8NAV2 365 aa11.1□□□□□ -0.63
AC003087.1-201ENST00000412828 DNAAF4Q8WXU2 420 aa11.1□□□□□ -0.63
AC003087.1-201ENST00000412828 RAD9AQ99638 391 aa11.1□□□□□ -0.63
AC003087.1-201ENST00000412828 KIAA1683Q9H0B3 1180 aa11.1□□□□□ -0.63
AC003087.1-201ENST00000412828 DHX36Q9H2U1 1008 aaKnown RBP11.1□□□□□ -0.63
AC003087.1-201ENST00000412828 SEMA4AQ9H3S1 761 aa11.1□□□□□ -0.63
AC003087.1-201ENST00000412828 NSUN3Q9H649 340 aaKnown RBP11.1□□□□□ -0.63
AC003087.1-201ENST00000412828 MROH7-TTC4A0A0A0MT08 1334 aa11.09□□□□□ -0.63
AC003087.1-201ENST00000412828 GDF11O95390 407 aa11.09□□□□□ -0.63
AC003087.1-201ENST00000412828 SDHBP21912 280 aa11.09□□□□□ -0.63
AC003087.1-201ENST00000412828 NKX3-2P78367 333 aa11.09□□□□□ -0.63
AC003087.1-201ENST00000412828 CBX2Q14781 532 aaPredicted RBP11.09□□□□□ -0.63
AC003087.1-201ENST00000412828 CTC1Q2NKJ3 1217 aa11.09□□□□□ -0.63
AC003087.1-201ENST00000412828 LRRC24Q50LG9 513 aa11.09□□□□□ -0.63
AC003087.1-201ENST00000412828 RPAINQ86UA6 219 aa11.09□□□□□ -0.63
AC003087.1-201ENST00000412828 MB21D1Q8N884 522 aa11.09□□□□□ -0.63
AC003087.1-201ENST00000412828 KCNG4Q8TDN1 519 aa11.09□□□□□ -0.63
AC003087.1-201ENST00000412828 FTOQ9C0B1 505 aaKnown RBP eCLIP11.09□□□□□ -0.63
AC003087.1-201ENST00000412828 RPAP3Q9H6T3 665 aaPredicted RBP11.09□□□□□ -0.63
AC003087.1-201ENST00000412828 SOBPA7XYQ1 873 aa11.08□□□□□ -0.64
AC003087.1-201ENST00000412828 LMNAP02545 664 aaKnown RBP11.08□□□□□ -0.64
AC003087.1-201ENST00000412828 PGK2P07205 417 aa11.08□□□□□ -0.64
AC003087.1-201ENST00000412828 SUPT20HL2P0C7V6 817 aa11.08□□□□□ -0.64
AC003087.1-201ENST00000412828 CLUL1Q15846 466 aa11.08□□□□□ -0.64
AC003087.1-201ENST00000412828 RSPO4Q2I0M5 234 aaPredicted RBP11.08□□□□□ -0.64
AC003087.1-201ENST00000412828 G2E3Q7L622 706 aa11.08□□□□□ -0.64
AC003087.1-201ENST00000412828 METTL16Q86W50 562 aaKnown RBP11.08□□□□□ -0.64
AC003087.1-201ENST00000412828 FOXP4Q8IVH2 680 aaPredicted RBP11.08□□□□□ -0.64
AC003087.1-201ENST00000412828 TMEM105Q8N8V8 129 aa11.08□□□□□ -0.64
AC003087.1-201ENST00000412828 MMP19Q99542 508 aa11.08□□□□□ -0.64
AC003087.1-201ENST00000412828 TRIM34Q9BYJ4 488 aa11.08□□□□□ -0.64
AC003087.1-201ENST00000412828 GNL3LQ9NVN8 582 aaKnown RBP11.08□□□□□ -0.64
AC003087.1-201ENST00000412828 ZHX1Q9UKY1 873 aaPredicted RBP11.08□□□□□ -0.64
AC003087.1-201ENST00000412828 DENND2AQ9ULE3 1009 aa11.08□□□□□ -0.64
AC003087.1-201ENST00000412828 GRIN2DO15399 1336 aa11.08□□□□□ -0.64
AC003087.1-201ENST00000412828 SEMA3EO15041 775 aa11.07□□□□□ -0.64
AC003087.1-201ENST00000412828 SLC25A27O95847 323 aa11.07□□□□□ -0.64
AC003087.1-201ENST00000412828 PDGFBP01127 241 aaPredicted RBP11.07□□□□□ -0.64
AC003087.1-201ENST00000412828 WDR5P61964 334 aaKnown RBP11.07□□□□□ -0.64
AC003087.1-201ENST00000412828 MKRN4PQ13434 485 aaPredicted RBP11.07□□□□□ -0.64
AC003087.1-201ENST00000412828 PLS1Q14651 629 aa11.07□□□□□ -0.64
AC003087.1-201ENST00000412828 CXCL17Q6UXB2 119 aa11.07□□□□□ -0.64
AC003087.1-201ENST00000412828 LPIN2Q92539 896 aa11.07□□□□□ -0.64
AC003087.1-201ENST00000412828 CRBNQ96SW2 442 aa11.07□□□□□ -0.64
AC003087.1-201ENST00000412828 DNAJC18Q9H819 358 aa11.07□□□□□ -0.64
AC003087.1-201ENST00000412828 MYH2Q9UKX2 1941 aa11.07□□□□□ -0.64
AC003087.1-201ENST00000412828 VPS13AQ96RL7 3174 aa11.06□□□□□ -0.64
AC003087.1-201ENST00000412828 CTAGE5O15320 804 aa11.06□□□□□ -0.64
AC003087.1-201ENST00000412828 GJB5O95377 273 aa11.06□□□□□ -0.64
AC003087.1-201ENST00000412828 SNAI1O95863 264 aaPredicted RBP11.06□□□□□ -0.64
AC003087.1-201ENST00000412828 ADRB1P08588 477 aa11.06□□□□□ -0.64
AC003087.1-201ENST00000412828 ICAM3P32942 547 aa11.06□□□□□ -0.64
AC003087.1-201ENST00000412828 DLX2Q07687 328 aaPredicted RBP11.06□□□□□ -0.64
AC003087.1-201ENST00000412828 TMCO2Q7Z6W1 182 aaPredicted RBP11.06□□□□□ -0.64
AC003087.1-201ENST00000412828 CRACR2BQ8N4Y2 399 aaPredicted RBP11.06□□□□□ -0.64
AC003087.1-201ENST00000412828 C17orf80Q9BSJ5 609 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 199.5 ms