RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 ZNF772Q68DY9 489 aaPredicted RBP19.08■□□□□ 0.64
SHANK1-201ENST00000293441 DDAH1O94760 285 aa19.08■□□□□ 0.64
SHANK1-201ENST00000293441 KRT81Q14533 505 aa19.08■□□□□ 0.64
SHANK1-201ENST00000293441 FYB2Q5VWT5 728 aa19.08■□□□□ 0.64
SHANK1-201ENST00000293441 DPP9Q86TI2 863 aa19.08■□□□□ 0.64
SHANK1-201ENST00000293441 ANKFY1Q9P2R3 1169 aa19.08■□□□□ 0.64
SHANK1-201ENST00000293441 LRRIQ4A6NIV6 560 aa19.07■□□□□ 0.64
SHANK1-201ENST00000293441 ZWINTO95229 277 aa19.07■□□□□ 0.64
SHANK1-201ENST00000293441 DMP1Q13316 513 aaPredicted RBP19.07■□□□□ 0.64
SHANK1-201ENST00000293441 IMPACTQ9P2X3 320 aa19.07■□□□□ 0.64
SHANK1-201ENST00000293441 DLATP10515 647 aaKnown RBP19.07■□□□□ 0.64
SHANK1-201ENST00000293441 ABCB4P21439 1286 aa19.07■□□□□ 0.64
SHANK1-201ENST00000293441 HS1BP3Q53T59 392 aa19.07■□□□□ 0.64
SHANK1-201ENST00000293441 CCDC84Q86UT8 332 aaPredicted RBP19.07■□□□□ 0.64
SHANK1-201ENST00000293441 SDAD1Q9NVU7 687 aaKnown RBP eCLIP19.07■□□□□ 0.64
SHANK1-201ENST00000293441 CAPN9O14815 690 aa19.07■□□□□ 0.64
SHANK1-201ENST00000293441 TM6SF1Q9BZW5 370 aa19.07■□□□□ 0.64
SHANK1-201ENST00000293441 EFCAB6Q5THR3 1501 aa19.07■□□□□ 0.64
SHANK1-201ENST00000293441 CARD6Q9BX69 1037 aa19.07■□□□□ 0.64
SHANK1-201ENST00000293441 GSPT1P15170 499 aaKnown RBP19.07■□□□□ 0.64
SHANK1-201ENST00000293441 FAM178BQ8IXR5 827 aa19.07■□□□□ 0.64
SHANK1-201ENST00000293441 LEMD3Q9Y2U8 911 aa19.07■□□□□ 0.64
SHANK1-201ENST00000293441 NPHP4O75161 1426 aaPredicted RBP19.07■□□□□ 0.64
SHANK1-201ENST00000293441 UBXN2AP68543 259 aa19.06■□□□□ 0.64
SHANK1-201ENST00000293441 MORC3Q14149 939 aa19.06■□□□□ 0.64
SHANK1-201ENST00000293441 NBPF3Q9H094 633 aa19.06■□□□□ 0.64
SHANK1-201ENST00000293441 AFG3L2Q9Y4W6 797 aa19.06■□□□□ 0.64
SHANK1-201ENST00000293441 APOL6Q9BWW8 343 aa19.06■□□□□ 0.64
SHANK1-201ENST00000293441 PLEKHA4Q9H4M7 779 aa19.06■□□□□ 0.64
SHANK1-201ENST00000293441 KCNJ18B7U540 433 aa19.06■□□□□ 0.64
SHANK1-201ENST00000293441 KCNJ12Q14500 433 aa19.06■□□□□ 0.64
SHANK1-201ENST00000293441 KCTD1Q719H9 257 aa19.06■□□□□ 0.64
SHANK1-201ENST00000293441 ADCY9O60503 1353 aa19.06■□□□□ 0.64
SHANK1-201ENST00000293441 KRT27Q7Z3Y8 459 aa19.06■□□□□ 0.64
SHANK1-201ENST00000293441 SEC31BQ9NQW1 1179 aa19.06■□□□□ 0.64
SHANK1-201ENST00000293441 STAT1P42224 750 aa19.06■□□□□ 0.64
SHANK1-201ENST00000293441 IFIH1Q9BYX4 1025 aaKnown RBP19.06■□□□□ 0.64
SHANK1-201ENST00000293441 FAM184BQ9ULE4 1060 aa19.06■□□□□ 0.64
SHANK1-201ENST00000293441 TPCN1Q9ULQ1 816 aa19.06■□□□□ 0.64
SHANK1-201ENST00000293441 ERBB4Q15303 1308 aa19.06■□□□□ 0.64
SHANK1-201ENST00000293441 GCC2Q8IWJ2 1684 aa19.06■□□□□ 0.64
SHANK1-201ENST00000293441 ZBTB24O43167 697 aaPredicted RBP19.05■□□□□ 0.64
SHANK1-201ENST00000293441 FAM160B1Q5W0V3 765 aa19.05■□□□□ 0.64
SHANK1-201ENST00000293441 RTEL1Q9NZ71 1219 aa19.05■□□□□ 0.64
SHANK1-201ENST00000293441 PCDHA1Q9Y5I3 950 aa19.05■□□□□ 0.64
SHANK1-201ENST00000293441 IL6STP40189 918 aaPredicted RBP19.05■□□□□ 0.64
SHANK1-201ENST00000293441 TBC1D8O95759 1140 aa19.05■□□□□ 0.64
SHANK1-201ENST00000293441 ATF7P17544 494 aaPredicted RBP19.05■□□□□ 0.64
SHANK1-201ENST00000293441 TMOD1P28289 359 aa19.05■□□□□ 0.64
SHANK1-201ENST00000293441 MAN1A1P33908 653 aa19.05■□□□□ 0.64
SHANK1-201ENST00000293441 ADKP55263 362 aaKnown RBP19.05■□□□□ 0.64
SHANK1-201ENST00000293441 KRT26Q7Z3Y9 468 aa19.05■□□□□ 0.64
SHANK1-201ENST00000293441 SEPT9Q9UHD8 586 aaPredicted RBP19.05■□□□□ 0.64
SHANK1-201ENST00000293441 CIB2O75838 187 aa19.05■□□□□ 0.64
SHANK1-201ENST00000293441 DYNLL1P63167 89 aaKnown RBP19.05■□□□□ 0.64
SHANK1-201ENST00000293441 CYP4A11Q02928 519 aa19.05■□□□□ 0.64
SHANK1-201ENST00000293441 ADALQ6DHV7 355 aa19.05■□□□□ 0.64
SHANK1-201ENST00000293441 ARMCX5Q6P1M9 558 aa19.05■□□□□ 0.64
SHANK1-201ENST00000293441 STAM2O75886 525 aa19.05■□□□□ 0.64
SHANK1-201ENST00000293441 LONRF2Q1L5Z9 754 aa19.05■□□□□ 0.64
SHANK1-201ENST00000293441 RSAD2Q8WXG1 361 aa19.05■□□□□ 0.64
SHANK1-201ENST00000293441 NUCKS1Q9H1E3 243 aaKnown RBP19.05■□□□□ 0.64
SHANK1-201ENST00000293441 METP08581 1390 aa19.04■□□□□ 0.64
SHANK1-201ENST00000293441 OSBPP22059 807 aa19.04■□□□□ 0.64
SHANK1-201ENST00000293441 TUBB2AQ13885 445 aa19.04■□□□□ 0.64
SHANK1-201ENST00000293441 TUBB2BQ9BVA1 445 aa19.04■□□□□ 0.64
SHANK1-201ENST00000293441 C1orf112Q9NSG2 853 aa19.04■□□□□ 0.64
SHANK1-201ENST00000293441 NRBP2Q9NSY0 501 aa19.04■□□□□ 0.64
SHANK1-201ENST00000293441 NLRP1Q9C000 1473 aa19.04■□□□□ 0.64
SHANK1-201ENST00000293441 UGGT1Q9NYU2 1555 aa19.04■□□□□ 0.64
SHANK1-201ENST00000293441 AFAP1L2Q8N4X5 818 aa19.04■□□□□ 0.64
SHANK1-201ENST00000293441 OATP04181 439 aa19.04■□□□□ 0.64
SHANK1-201ENST00000293441 CEP57Q86XR8 500 aa19.04■□□□□ 0.64
SHANK1-201ENST00000293441 PFKFB2O60825 505 aa19.04■□□□□ 0.64
SHANK1-201ENST00000293441 GDF11O95390 407 aa19.04■□□□□ 0.64
SHANK1-201ENST00000293441 KCTD2Q14681 263 aa19.04■□□□□ 0.64
SHANK1-201ENST00000293441 SLC39A2Q9NP94 309 aa19.04■□□□□ 0.64
SHANK1-201ENST00000293441 ATF5Q9Y2D1 282 aaPredicted RBP19.04■□□□□ 0.64
SHANK1-201ENST00000293441 BLMP54132 1417 aaPredicted RBP19.04■□□□□ 0.64
SHANK1-201ENST00000293441 HGSO14964 777 aaPredicted RBP19.04■□□□□ 0.64
SHANK1-201ENST00000293441 SEPT14Q6ZU15 432 aa19.04■□□□□ 0.64
SHANK1-201ENST00000293441 ERO1AQ96HE7 468 aa19.04■□□□□ 0.64
SHANK1-201ENST00000293441 MKRN1Q9UHC7 482 aaKnown RBP19.04■□□□□ 0.64
SHANK1-201ENST00000293441 M0R2C6 588 aa19.03■□□□□ 0.64
SHANK1-201ENST00000293441 SEMA3EO15041 775 aa19.03■□□□□ 0.64
SHANK1-201ENST00000293441 ERCC6LQ2NKX8 1250 aa19.03■□□□□ 0.64
SHANK1-201ENST00000293441 CFAP221Q4G0U5 840 aa19.03■□□□□ 0.64
SHANK1-201ENST00000293441 TRIM50Q86XT4 487 aa19.03■□□□□ 0.64
SHANK1-201ENST00000293441 SWAP70Q9UH65 585 aa19.03■□□□□ 0.64
SHANK1-201ENST00000293441 RAD17O75943 681 aa19.03■□□□□ 0.64
SHANK1-201ENST00000293441 ITKQ08881 620 aa19.03■□□□□ 0.64
SHANK1-201ENST00000293441 AFAP1L1Q8TED9 768 aa19.03■□□□□ 0.64
SHANK1-201ENST00000293441 CLIC6Q96NY7 704 aa19.03■□□□□ 0.64
SHANK1-201ENST00000293441 AMFRQ9UKV5 643 aa19.03■□□□□ 0.64
SHANK1-201ENST00000293441 PRAMEF22A3QJZ6 481 aa19.03■□□□□ 0.64
SHANK1-201ENST00000293441 CFAP57Q96MR6 1250 aa19.03■□□□□ 0.64
SHANK1-201ENST00000293441 TMEM191BP0C7N4 346 aa19.03■□□□□ 0.64
SHANK1-201ENST00000293441 U2AF2P26368 475 aaKnown RBP eCLIP19.03■□□□□ 0.64
SHANK1-201ENST00000293441 GALNT17Q6IS24 598 aa19.03■□□□□ 0.64
SHANK1-201ENST00000293441 SND1Q7KZF4 910 aaKnown RBP eCLIP19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms