RNA–Protein interactions for RNA: snR50

snR50, Transcript of C/D box small nucleolar RNA (snoRNA), yeast

Gene snR50, Length 90 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR50	snR50	AIM32	Q04689	311 aa		0.16	□□□□□ -2.38
snR50	snR50	CRF1	Q04930	467 aa		0.16	□□□□□ -2.38
snR50	snR50	TRI1	Q05024	226 aa		0.16	□□□□□ -2.38
snR50	snR50	PBA1	Q05778	276 aa		0.16	□□□□□ -2.38
snR50	snR50	VAM6	Q07468	1049 aa		0.16	□□□□□ -2.38
snR50	snR50	YDL218W	Q07629	317 aa		0.16	□□□□□ -2.38
snR50	snR50	THI20	Q08224	551 aa		0.16	□□□□□ -2.38
snR50	snR50	URA3	P03962	267 aa		0.15	□□□□□ -2.39
snR50	snR50	CHO1	P08456	276 aa		0.15	□□□□□ -2.39
snR50	snR50	SPO7	P18410	259 aa		0.15	□□□□□ -2.39
snR50	snR50	TKL1	P23254	680 aa	Known RBP	0.15	□□□□□ -2.39
snR50	snR50	PUT3	P25502	979 aa	Predicted RBP	0.15	□□□□□ -2.39
snR50	snR50	CMK1	P27466	446 aa	Known RBP	0.15	□□□□□ -2.39
snR50	snR50	PRE2	P30656	287 aa	Known RBP	0.15	□□□□□ -2.39
snR50	snR50	PET309	P32522	965 aa	Predicted RBP	0.15	□□□□□ -2.39
snR50	snR50	VPS17	P32913	551 aa		0.15	□□□□□ -2.39
snR50	snR50	ECM15	P35195	104 aa		0.15	□□□□□ -2.39
snR50	snR50	STV1	P37296	890 aa		0.15	□□□□□ -2.39
snR50	snR50	ARA1	P38115	344 aa		0.15	□□□□□ -2.39
snR50	snR50	RFC1	P38630	861 aa	Known RBP	0.15	□□□□□ -2.39
snR50	snR50	ARB1	P40024	610 aa	Known RBP	0.15	□□□□□ -2.39
snR50	snR50	DJP1	P40564	432 aa		0.15	□□□□□ -2.39
snR50	snR50	GZF3	P42944	551 aa	Known RBP	0.15	□□□□□ -2.39
snR50	snR50	RPN11	P43588	306 aa	Known RBP	0.15	□□□□□ -2.39
snR50	snR50	MNN11	P46985	422 aa	Known RBP	0.15	□□□□□ -2.39
snR50	snR50	YGR153W	P48238	217 aa		0.15	□□□□□ -2.39
snR50	snR50	SAM50	P53969	484 aa		0.15	□□□□□ -2.39
snR50	snR50	TRS31	Q03337	283 aa		0.15	□□□□□ -2.39
snR50	snR50	YHM2	Q04013	314 aa		0.15	□□□□□ -2.39
snR50	snR50	YDR109C	Q04585	715 aa		0.15	□□□□□ -2.39
snR50	snR50	NSE3	Q05541	303 aa		0.15	□□□□□ -2.39
snR50	snR50	MRPL35	Q06678	367 aa		0.15	□□□□□ -2.39
snR50	snR50	CSR1	Q06705	408 aa	Known RBP	0.15	□□□□□ -2.39
snR50	snR50	NGL1	Q08213	363 aa	Known RBP	0.15	□□□□□ -2.39
snR50	snR50	YOR378W	Q08902	515 aa		0.15	□□□□□ -2.39
snR50	snR50	YPQ1	Q12010	308 aa		0.15	□□□□□ -2.39
snR50	snR50	HOS1	Q12214	470 aa		0.15	□□□□□ -2.39
snR50	snR50	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	0.15	□□□□□ -2.39	not detected
snR50	snR50	FMT1	P32785	401 aa		0.14	□□□□□ -2.39
snR50	snR50	SDH3	P33421	198 aa		0.14	□□□□□ -2.39
snR50	snR50	MIA40	P36046	403 aa		0.14	□□□□□ -2.39
snR50	snR50	NPR2	P39923	615 aa		0.14	□□□□□ -2.39
snR50	snR50	BUD16	P39988	312 aa		0.14	□□□□□ -2.39
snR50	snR50	VFA1	P40080	203 aa		0.14	□□□□□ -2.39
snR50	snR50	ALG8	P40351	577 aa		0.14	□□□□□ -2.39
snR50	snR50	AXL1	P40851	1208 aa		0.14	□□□□□ -2.39
snR50	snR50	YJR120W	P47157	116 aa		0.14	□□□□□ -2.39
snR50	snR50	YNR071C	P53757	342 aa		0.14	□□□□□ -2.39
snR50	snR50	WSC2	P53832	503 aa		0.14	□□□□□ -2.39
snR50	snR50	YNL193W	P53870	558 aa		0.14	□□□□□ -2.39
snR50	snR50	ADE16	P54113	591 aa	Known RBP	0.14	□□□□□ -2.39
snR50	snR50	PFA5	Q03289	374 aa		0.14	□□□□□ -2.39
snR50	snR50	SKY1	Q03656	742 aa		0.14	□□□□□ -2.39
snR50	snR50	ECM7	Q06200	448 aa		0.14	□□□□□ -2.39
snR50	snR50	ATG23	Q06671	453 aa		0.14	□□□□□ -2.39
snR50	snR50	FMP45	Q07651	309 aa		0.14	□□□□□ -2.39
snR50	snR50	AIM6	Q07716	390 aa		0.14	□□□□□ -2.39
snR50	snR50	YLR125W	Q12138	136 aa		0.14	□□□□□ -2.39
snR50	snR50	RPS21A	P0C0V8	87 aa	Known RBP	0.13	□□□□□ -2.39
snR50	snR50	BIK1	P11709	440 aa		0.13	□□□□□ -2.39
snR50	snR50	RAP1	P11938	827 aa		0.13	□□□□□ -2.39
snR50	snR50	HEM15	P16622	393 aa		0.13	□□□□□ -2.39
snR50	snR50	OLE1	P21147	510 aa	Known RBP	0.13	□□□□□ -2.39
snR50	snR50	SEC62	P21825	274 aa		0.13	□□□□□ -2.39
snR50	snR50	YCK1	P23291	538 aa		0.13	□□□□□ -2.39
snR50	snR50	SGV1	P23293	657 aa	Known RBP	0.13	□□□□□ -2.39
snR50	snR50	MCM4	P30665	933 aa	Known RBP	0.13	□□□□□ -2.39
snR50	snR50	SNC1	P31109	117 aa		0.13	□□□□□ -2.39
snR50	snR50	PTK1	P36002	662 aa	Predicted RBP	0.13	□□□□□ -2.39
snR50	snR50	KKQ8	P36004	724 aa		0.13	□□□□□ -2.39
snR50	snR50	ADE17	P38009	592 aa	Known RBP	0.13	□□□□□ -2.39
snR50	snR50	MRPS9	P38120	278 aa		0.13	□□□□□ -2.39
snR50	snR50	UBP13	P38187	747 aa		0.13	□□□□□ -2.39
snR50	snR50	YPT35	P38815	214 aa	Known RBP	0.13	□□□□□ -2.39
snR50	snR50	SEO1	P39709	593 aa		0.13	□□□□□ -2.39
snR50	snR50	CSM2	P40465	213 aa		0.13	□□□□□ -2.39
snR50	snR50	MAD2	P40958	196 aa		0.13	□□□□□ -2.39
snR50	snR50	PFS2	P42841	465 aa	Known RBP	0.13	□□□□□ -2.39
snR50	snR50	POL31	P46957	487 aa		0.13	□□□□□ -2.39
snR50	snR50	CTK2	P46962	323 aa		0.13	□□□□□ -2.39
snR50	snR50	YJR096W	P47137	282 aa		0.13	□□□□□ -2.39
snR50	snR50	RNR4	P49723	345 aa	Known RBP	0.13	□□□□□ -2.39
snR50	snR50	YGR079W	P53249	370 aa		0.13	□□□□□ -2.39
snR50	snR50	SOL4	P53315	255 aa		0.13	□□□□□ -2.39
snR50	snR50	DCP2	P53550	970 aa	Known RBP	0.13	□□□□□ -2.39
snR50	snR50	RPC11	Q04307	110 aa	Predicted RBP	0.13	□□□□□ -2.39
snR50	snR50	ESA1	Q08649	445 aa		0.13	□□□□□ -2.39
snR50	snR50	CDC53	Q12018	815 aa	Known RBP	0.13	□□□□□ -2.39
snR50	snR50	PDH1	Q12428	516 aa	Known RBP	0.13	□□□□□ -2.39
snR50	snR50	CTF3	Q12748	733 aa		0.13	□□□□□ -2.39
snR50	snR50	TY1B-A	O13527	1196 aa	Known RBP	0.12	□□□□□ -2.39
snR50	snR50	MAS2	P11914	482 aa		0.12	□□□□□ -2.39
snR50	snR50	AMD1	P15274	810 aa	Known RBP	0.12	□□□□□ -2.39
snR50	snR50	PET123	P17558	318 aa		0.12	□□□□□ -2.39
snR50	snR50	YSP3	P25036	478 aa		0.12	□□□□□ -2.39
snR50	snR50	RAD16	P31244	790 aa		0.12	□□□□□ -2.39
snR50	snR50	YME2	P32843	850 aa		0.12	□□□□□ -2.39
snR50	snR50	TIM23	P32897	222 aa		0.12	□□□□□ -2.39
snR50	snR50	SEF1	P34228	1148 aa		0.12	□□□□□ -2.39
snR50	snR50	PIM1	P36775	1133 aa		0.12	□□□□□ -2.39

Retrieved 100 of 5,963 RNA–protein pairs in 39.2 ms