RNA–Protein interactions for RNA: snR35

snR35, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR35, Length 204 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR35snR35 ETT1Q08421 412 aaKnown RBP3.31□□□□□ -1.88
snR35snR35 YPL272CQ08984 517 aa3.31□□□□□ -1.88
snR35snR35 INP53Q12271 1107 aa3.31□□□□□ -1.88
snR35snR35 SPE4Q12455 300 aa3.31□□□□□ -1.88
snR35snR35 ARG3P05150 338 aa3.3□□□□□ -1.88
snR35snR35 DFR1P07807 211 aaKnown RBP RIP-Chip data3.3□□□□□ -1.88not detected
snR35snR35 POL4P25615 582 aa3.3□□□□□ -1.88
snR35snR35 PEP3P27801 918 aa3.3□□□□□ -1.88
snR35snR35 MSS51P32335 436 aa3.3□□□□□ -1.88
snR35snR35 YKL050CP35736 922 aa3.3□□□□□ -1.88
snR35snR35 HOT13P36078 116 aa3.3□□□□□ -1.88
snR35snR35 SPO22P40511 975 aa3.3□□□□□ -1.88
snR35snR35 VTC2P43585 828 aa3.3□□□□□ -1.88
snR35snR35 BPL1P48445 690 aaPredicted RBP3.3□□□□□ -1.88
snR35snR35 ORC5P50874 479 aa3.3□□□□□ -1.88
snR35snR35 DIA3P52290 468 aa3.3□□□□□ -1.88
snR35snR35 YOR389WQ08912 624 aa3.3□□□□□ -1.88
snR35snR35 ATG9Q12142 997 aa3.3□□□□□ -1.88
snR35snR35 HSH49Q99181 213 aaPredicted RBP3.3□□□□□ -1.88
snR35snR35 MF(ALPHA)1P01149 165 aa3.29□□□□□ -1.88
snR35snR35 ARD1P07347 238 aaPredicted RBP3.29□□□□□ -1.88
snR35snR35 PET111P08468 800 aa3.29□□□□□ -1.88
snR35snR35 ILS1P09436 1072 aaKnown RBP3.29□□□□□ -1.88
snR35snR35 TUB1P09733 447 aaKnown RBP3.29□□□□□ -1.88
snR35snR35 RED1P14291 827 aa3.29□□□□□ -1.88
snR35snR35 SPE2P21182 396 aa3.29□□□□□ -1.88
snR35snR35 LCB1P25045 558 aaKnown RBP3.29□□□□□ -1.88
snR35snR35 NFU1P32860 256 aa3.29□□□□□ -1.88
snR35snR35 REG2P38232 338 aa3.29□□□□□ -1.88
snR35snR35 CCT6P39079 546 aa3.29□□□□□ -1.88
snR35snR35 TPA1P40032 644 aaKnown RBP3.29□□□□□ -1.88
snR35snR35 BUR6P40096 142 aa3.29□□□□□ -1.88
snR35snR35 MET28P40573 187 aa3.29□□□□□ -1.88
snR35snR35 CIN1P40987 1014 aa3.29□□□□□ -1.88
snR35snR35 ROK1P45818 564 aaPredicted RBP3.29□□□□□ -1.88
snR35snR35 FAR3P46671 204 aa3.29□□□□□ -1.88
snR35snR35 RPS7BP48164 190 aaKnown RBP3.29□□□□□ -1.88
snR35snR35 LYS4P49367 693 aaPredicted RBP3.29□□□□□ -1.88
snR35snR35 VID30P53076 958 aa3.29□□□□□ -1.88
snR35snR35 YPR003CP53394 754 aa3.29□□□□□ -1.88
snR35snR35 UTP21Q06078 939 aaPredicted RBP3.29□□□□□ -1.88
snR35snR35 YLR455WQ06188 304 aa3.29□□□□□ -1.88
snR35snR35 FMP40Q08968 688 aaPredicted RBP3.29□□□□□ -1.88
snR35snR35 YLR111WQ12528 110 aa3.29□□□□□ -1.88
snR35snR35 YPT6Q99260 215 aa3.29□□□□□ -1.88
snR35snR35 FUR1P18562 216 aaKnown RBP3.28□□□□□ -1.88
snR35snR35 ROX1P25042 368 aa3.28□□□□□ -1.88
snR35snR35 PPZ2P33329 710 aa3.28□□□□□ -1.88
snR35snR35 OCT1P35999 772 aa3.28□□□□□ -1.88
snR35snR35 RKM3P38222 552 aa3.28□□□□□ -1.88
snR35snR35 MUM2P38236 366 aa3.28□□□□□ -1.88
snR35snR35 IMD2P38697 523 aaKnown RBP3.28□□□□□ -1.88
snR35snR35 ARN1P38731 627 aa3.28□□□□□ -1.88
snR35snR35 ERV46P39727 415 aa3.28□□□□□ -1.88
snR35snR35 YFR020WP43600 232 aa3.28□□□□□ -1.88
snR35snR35 TAX4P47030 604 aa3.28□□□□□ -1.88
snR35snR35 IMD3P50095 523 aaKnown RBP3.28□□□□□ -1.88
snR35snR35 YGR127WP53275 312 aa3.28□□□□□ -1.88
snR35snR35 BOP3P53958 396 aa3.28□□□□□ -1.88
snR35snR35 EFM6P53970 246 aa3.28□□□□□ -1.88
snR35snR35 ZDS2P54786 942 aa3.28□□□□□ -1.88
snR35snR35 YPL071CQ02864 156 aa3.28□□□□□ -1.88
snR35snR35 YMR178WQ03219 274 aaKnown RBP3.28□□□□□ -1.88
snR35snR35 SYF1Q04048 859 aaPredicted RBP3.28□□□□□ -1.88
snR35snR35 LUC7Q07508 261 aaPredicted RBP3.28□□□□□ -1.88
snR35snR35 APL4Q12028 832 aa3.28□□□□□ -1.88
snR35snR35 YLR049CQ12110 428 aa3.28□□□□□ -1.88
snR35snR35 LEU9Q12166 604 aaKnown RBP3.28□□□□□ -1.88
snR35snR35 ERP4Q12450 207 aa3.28□□□□□ -1.88
snR35snR35 STE50P25344 346 aa3.27□□□□□ -1.89
snR35snR35 ERG3P32353 365 aa3.27□□□□□ -1.89
snR35snR35 SAC1P32368 623 aaKnown RBP3.27□□□□□ -1.89
snR35snR35 SSE2P32590 693 aaKnown RBP3.27□□□□□ -1.89
snR35snR35 ORC2P32833 620 aa3.27□□□□□ -1.89
snR35snR35 UBP11P36026 717 aa3.27□□□□□ -1.89
snR35snR35 RIX1P38883 763 aaPredicted RBP3.27□□□□□ -1.89
snR35snR35 MET18P40469 1032 aa3.27□□□□□ -1.89
snR35snR35 APT1P49435 187 aaKnown RBP3.27□□□□□ -1.89
snR35snR35 JJJ1P53863 590 aa3.27□□□□□ -1.89
snR35snR35 MAK10Q02197 733 aa3.27□□□□□ -1.89
snR35snR35 SNU56Q03782 492 aaKnown RBP3.27□□□□□ -1.89
snR35snR35 FIN1Q03898 291 aa3.27□□□□□ -1.89
snR35snR35 ORM2Q06144 216 aa3.27□□□□□ -1.89
snR35snR35 PDR8Q06149 701 aa3.27□□□□□ -1.89
snR35snR35 TPO3Q06451 622 aa3.27□□□□□ -1.89
snR35snR35 MCH4Q08268 501 aa3.27□□□□□ -1.89
snR35snR35 OSW1Q08692 278 aa3.27□□□□□ -1.89
snR35snR35 GET3Q12154 354 aaKnown RBP3.27□□□□□ -1.89
snR35snR35 AVL9Q12500 764 aa3.27□□□□□ -1.89
snR35snR35 PGA3Q12746 312 aaKnown RBP3.27□□□□□ -1.89
snR35snR35 MET17P06106 444 aa3.26□□□□□ -1.89
snR35snR35 RAP1P11938 827 aa3.26□□□□□ -1.89
snR35snR35 KRS1P15180 591 aaKnown RBP3.26□□□□□ -1.89
snR35snR35 CLB2P24869 491 aa3.26□□□□□ -1.89
snR35snR35 PUP3P25451 205 aaKnown RBP3.26□□□□□ -1.89
snR35snR35 SRO77P38163 1010 aa3.26□□□□□ -1.89
snR35snR35 VID24P38263 362 aa3.26□□□□□ -1.89
snR35snR35 ELO1P39540 310 aa3.26□□□□□ -1.89
snR35snR35 AFG3P39925 761 aa3.26□□□□□ -1.89
snR35snR35 YEL057CP39983 233 aa3.26□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 37.4 ms