RNA–Protein interactions for RNA: YPR088C

SRP54, Transcript of Signal recognition particle (SRP) subunit (homolog of mammalian SRP54), yeastyeast

Gene SRP54, Length 1,626 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRP54YPR088C IME4P41833 600 aa8.3□□□□□ -1.08
SRP54YPR088C UBP6P43593 499 aaKnown RBP8.3□□□□□ -1.08
SRP54YPR088C RSM7P47150 247 aa8.3□□□□□ -1.08
SRP54YPR088C RNR4P49723 345 aaKnown RBP8.3□□□□□ -1.08
SRP54YPR088C EMC4P53073 190 aa8.3□□□□□ -1.08
SRP54YPR088C FMN1Q03778 218 aa8.3□□□□□ -1.08
SRP54YPR088C PPN1Q04119 674 aa8.3□□□□□ -1.08
SRP54YPR088C BLS1Q06071 122 aa8.3□□□□□ -1.08
SRP54YPR088C SEC10Q06245 871 aa8.3□□□□□ -1.08
SRP54YPR088C ENT4Q07872 247 aa8.3□□□□□ -1.08
SRP54YPR088C YPL225WQ08971 146 aaKnown RBP8.3□□□□□ -1.08
SRP54YPR088C DAP1Q12091 152 aa8.3□□□□□ -1.08
SRP54YPR088C MRH1Q12117 320 aaPredicted RBP8.3□□□□□ -1.08
SRP54YPR088C YOL087CQ99247 1116 aa8.3□□□□□ -1.08
SRP54YPR088C MPD2Q99316 277 aa8.3□□□□□ -1.08
SRP54YPR088C SEC53P07283 254 aaKnown RBP8.29□□□□□ -1.08
SRP54YPR088C MPH2P0CD99 609 aa8.29□□□□□ -1.08
SRP54YPR088C PMR1P13586 950 aa8.29□□□□□ -1.08
SRP54YPR088C MRPL9P31334 269 aa8.29□□□□□ -1.08
SRP54YPR088C TOA1P32773 286 aa8.29□□□□□ -1.08
SRP54YPR088C IRS4P36115 615 aaKnown RBP8.29□□□□□ -1.08
SRP54YPR088C YBR259WP38338 688 aa8.29□□□□□ -1.08
SRP54YPR088C RFC3P38629 340 aa8.29□□□□□ -1.08
SRP54YPR088C OSW5P40219 148 aa8.29□□□□□ -1.08
SRP54YPR088C AIF1P52923 378 aa8.29□□□□□ -1.08
SRP54YPR088C VAC7P53950 1165 aa8.29□□□□□ -1.08
SRP54YPR088C YMR178WQ03219 274 aaKnown RBP8.29□□□□□ -1.08
SRP54YPR088C SPO20Q04359 397 aa8.29□□□□□ -1.08
SRP54YPR088C YDR338CQ05497 695 aa8.29□□□□□ -1.08
SRP54YPR088C TGL5Q12043 749 aa8.29□□□□□ -1.08
SRP54YPR088C RPS14AP06367 137 aaKnown RBP8.29□□□□□ -1.08
SRP54YPR088C RAD3P06839 778 aa8.29□□□□□ -1.08
SRP54YPR088C HIS5P07172 385 aa8.29□□□□□ -1.08
SRP54YPR088C SPS1P08458 490 aa8.29□□□□□ -1.08
SRP54YPR088C SBP1P10080 294 aaKnown RBP8.29□□□□□ -1.08
SRP54YPR088C RNA1P11745 407 aaKnown RBP8.29□□□□□ -1.08
SRP54YPR088C SNT1P25357 1226 aa8.29□□□□□ -1.08
SRP54YPR088C PPZ1P26570 692 aa8.29□□□□□ -1.08
SRP54YPR088C BRF1P29056 596 aa8.29□□□□□ -1.08
SRP54YPR088C PTM1P32857 523 aa8.29□□□□□ -1.08
SRP54YPR088C VRP1P37370 817 aa8.29□□□□□ -1.08
SRP54YPR088C LRP1P38801 184 aaKnown RBP8.29□□□□□ -1.08
SRP54YPR088C SEC31P38968 1273 aaKnown RBP8.29□□□□□ -1.08
SRP54YPR088C RPS14BP39516 138 aaKnown RBP8.29□□□□□ -1.08
SRP54YPR088C TMA22P47089 198 aaPredicted RBP8.29□□□□□ -1.08
SRP54YPR088C GTR1Q00582 310 aa8.29□□□□□ -1.08
SRP54YPR088C UBP2Q01476 1272 aa8.29□□□□□ -1.08
SRP54YPR088C RMI1Q02685 241 aa8.29□□□□□ -1.08
SRP54YPR088C CIA1Q05583 330 aa8.29□□□□□ -1.08
SRP54YPR088C ALR1Q08269 859 aa8.29□□□□□ -1.08
SRP54YPR088C RAD59Q12223 238 aa8.29□□□□□ -1.08
SRP54YPR088C ICT1Q12385 394 aa8.29□□□□□ -1.08
SRP54YPR088C YPL247CQ12523 523 aa8.29□□□□□ -1.08
SRP54YPR088C RPS9AO13516 197 aaKnown RBP8.28□□□□□ -1.08
SRP54YPR088C HEM2P05373 342 aa8.28□□□□□ -1.08
SRP54YPR088C MSF1P08425 469 aa8.28□□□□□ -1.08
SRP54YPR088C NMT1P14743 455 aa8.28□□□□□ -1.08
SRP54YPR088C SEC63P14906 663 aa8.28□□□□□ -1.08
SRP54YPR088C APA1P16550 321 aaKnown RBP8.28□□□□□ -1.08
SRP54YPR088C SEC15P22224 910 aa8.28□□□□□ -1.08
SRP54YPR088C UBA1P22515 1024 aaKnown RBP8.28□□□□□ -1.08
SRP54YPR088C OXP1P28273 1286 aa8.28□□□□□ -1.08
SRP54YPR088C PDB1P32473 366 aaKnown RBP8.28□□□□□ -1.08
SRP54YPR088C SPS19P32573 292 aaKnown RBP8.28□□□□□ -1.08
SRP54YPR088C EFM1P38732 585 aa8.28□□□□□ -1.08
SRP54YPR088C BZZ1P38822 633 aa8.28□□□□□ -1.08
SRP54YPR088C STN1P38960 494 aa8.28□□□□□ -1.08
SRP54YPR088C PRM2P40534 656 aa8.28□□□□□ -1.08
SRP54YPR088C CLD1P53264 445 aa8.28□□□□□ -1.08
SRP54YPR088C SLM2P53955 656 aa8.28□□□□□ -1.08
SRP54YPR088C ARP4P80428 489 aa8.28□□□□□ -1.08
SRP54YPR088C HDA3Q06623 655 aa8.28□□□□□ -1.08
SRP54YPR088C YOL019WQ08157 551 aa8.28□□□□□ -1.08
SRP54YPR088C BUD7Q08754 746 aa8.28□□□□□ -1.08
SRP54YPR088C MRM1P25270 412 aa8.27□□□□□ -1.09
SRP54YPR088C PUP3P25451 205 aaKnown RBP8.27□□□□□ -1.09
SRP54YPR088C PRP18P33411 251 aaPredicted RBP8.27□□□□□ -1.09
SRP54YPR088C SHU2P38957 223 aa8.27□□□□□ -1.09
SRP54YPR088C IRR1P40541 1150 aa8.27□□□□□ -1.09
SRP54YPR088C YIR007WP40566 764 aa8.27□□□□□ -1.09
SRP54YPR088C SET2P46995 733 aaKnown RBP8.27□□□□□ -1.09
SRP54YPR088C ATH1P48016 1211 aa8.27□□□□□ -1.09
SRP54YPR088C LSM3P57743 89 aaKnown RBP8.27□□□□□ -1.09
SRP54YPR088C OSH6Q02201 448 aa8.27□□□□□ -1.09
SRP54YPR088C GOT1Q03554 138 aa8.27□□□□□ -1.09
SRP54YPR088C TAF12Q03761 539 aa8.27□□□□□ -1.09
SRP54YPR088C RCO1Q04779 684 aa8.27□□□□□ -1.09
SRP54YPR088C VTA1Q06263 330 aa8.27□□□□□ -1.09
SRP54YPR088C NSE1Q07913 336 aa8.27□□□□□ -1.09
SRP54YPR088C IRC10Q08118 586 aa8.27□□□□□ -1.09
SRP54YPR088C RRP36Q12481 300 aaPredicted RBP8.27□□□□□ -1.09
SRP54YPR088C SKT5P34226 696 aa8.26□□□□□ -1.09
SRP54YPR088C THI80P35202 319 aa8.26□□□□□ -1.09
SRP54YPR088C LRG1P35688 1017 aa8.26□□□□□ -1.09
SRP54YPR088C DCW1P36091 449 aa8.26□□□□□ -1.09
SRP54YPR088C MPT5P39016 859 aaKnown RBP RIP-Chip data8.26□□□□□ -1.09not detected
SRP54YPR088C COA1P40452 197 aa8.26□□□□□ -1.09
SRP54YPR088C FRE4P53746 719 aa8.26□□□□□ -1.09
SRP54YPR088C YPL109CQ02981 657 aa8.26□□□□□ -1.09
SRP54YPR088C YOR012WQ12351 137 aa8.26□□□□□ -1.09
Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms