RNA–Protein interactions for RNA: YNL189W

SRP1, Transcript of Karyopherin alpha homolog, yeast

Gene SRP1, Length 1,629 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SRP1	YNL189W	BUR6	P40096	142 aa		3.51	□□□□□ -1.85
SRP1	YNL189W	RPS7B	P48164	190 aa	Known RBP	3.51	□□□□□ -1.85
SRP1	YNL189W	NGL3	Q03210	505 aa		3.51	□□□□□ -1.85
SRP1	YNL189W	YLR049C	Q12110	428 aa		3.51	□□□□□ -1.85
SRP1	YNL189W	YLR112W	Q12130	139 aa		3.51	□□□□□ -1.85
SRP1	YNL189W	YPT1	P01123	206 aa	Known RBP	3.5	□□□□□ -1.85
SRP1	YNL189W	CDC15	P27636	974 aa		3.5	□□□□□ -1.85
SRP1	YNL189W	RTS1	P38903	757 aa		3.5	□□□□□ -1.85
SRP1	YNL189W	NOP16	P40007	231 aa	Known RBP	3.5	□□□□□ -1.85
SRP1	YNL189W	LTP1	P40347	161 aa		3.5	□□□□□ -1.85
SRP1	YNL189W	CFD1	P40558	293 aa		3.5	□□□□□ -1.85
SRP1	YNL189W	RPL15B	P54780	204 aa	Predicted RBP	3.5	□□□□□ -1.85
SRP1	YNL189W	INA17	Q02888	182 aa		3.5	□□□□□ -1.85
SRP1	YNL189W	CIR2	Q08822	631 aa		3.5	□□□□□ -1.85
SRP1	YNL189W	POL4	P25615	582 aa		3.49	□□□□□ -1.85
SRP1	YNL189W	ARP1	P38696	384 aa		3.49	□□□□□ -1.85
SRP1	YNL189W	TMA108	P40462	946 aa		3.49	□□□□□ -1.85
SRP1	YNL189W	TMA64	Q04600	565 aa	Known RBP	3.49	□□□□□ -1.85
SRP1	YNL189W	HER1	Q12276	1246 aa		3.49	□□□□□ -1.85
SRP1	YNL189W	SPE4	Q12455	300 aa		3.49	□□□□□ -1.85
SRP1	YNL189W	YBR126W-A	Q8TGU7	68 aa		3.49	□□□□□ -1.85
SRP1	YNL189W	RAP1	P11938	827 aa		3.48	□□□□□ -1.85
SRP1	YNL189W	KRS1	P15180	591 aa	Known RBP	3.48	□□□□□ -1.85
SRP1	YNL189W	PWP1	P21304	576 aa	Known RBP	3.48	□□□□□ -1.85
SRP1	YNL189W	HXT9	P40885	567 aa		3.48	□□□□□ -1.85
SRP1	YNL189W	YPT11	P48559	417 aa		3.48	□□□□□ -1.85
SRP1	YNL189W	HXK2	P04807	486 aa	Known RBP	3.48	□□□□□ -1.85
SRP1	YNL189W	RPL42A	P0CX27	106 aa	Known RBP	3.48	□□□□□ -1.85
SRP1	YNL189W	RPL42B	P0CX28	106 aa	Known RBP	3.48	□□□□□ -1.85
SRP1	YNL189W	AUR1	P36107	401 aa	Predicted RBP	3.48	□□□□□ -1.85
SRP1	YNL189W	GND1	P38720	489 aa	Known RBP	3.48	□□□□□ -1.85
SRP1	YNL189W	ANS1	P38832	159 aa		3.48	□□□□□ -1.85
SRP1	YNL189W	RPN11	P43588	306 aa	Known RBP	3.48	□□□□□ -1.85
SRP1	YNL189W	DPB11	P47027	764 aa	Predicted RBP	3.48	□□□□□ -1.85
SRP1	YNL189W	DSD1	P53095	428 aa		3.48	□□□□□ -1.85
SRP1	YNL189W	STR3	P53101	465 aa	Known RBP	3.48	□□□□□ -1.85
SRP1	YNL189W	NNF2	P53253	936 aa		3.48	□□□□□ -1.85
SRP1	YNL189W	YNL144C	P53907	740 aa		3.48	□□□□□ -1.85
SRP1	YNL189W	MAK10	Q02197	733 aa		3.48	□□□□□ -1.85
SRP1	YNL189W	RPC11	Q04307	110 aa	Predicted RBP	3.48	□□□□□ -1.85
SRP1	YNL189W	PSR1	Q07800	427 aa		3.48	□□□□□ -1.85
SRP1	YNL189W	GEP3	Q08622	556 aa		3.48	□□□□□ -1.85
SRP1	YNL189W	YPL272C	Q08984	517 aa		3.48	□□□□□ -1.85
SRP1	YNL189W	INP53	Q12271	1107 aa		3.48	□□□□□ -1.85
SRP1	YNL189W	RRI2	Q12348	645 aa		3.48	□□□□□ -1.85
SRP1	YNL189W	SEM1	O94742	89 aa		3.47	□□□□□ -1.85
SRP1	YNL189W	MET8	P15807	274 aa		3.47	□□□□□ -1.85
SRP1	YNL189W	KGD1	P20967	1014 aa	Known RBP	3.47	□□□□□ -1.85
SRP1	YNL189W	SAC1	P32368	623 aa	Known RBP	3.47	□□□□□ -1.85
SRP1	YNL189W	PDB1	P32473	366 aa	Known RBP	3.47	□□□□□ -1.85
SRP1	YNL189W	LEU5	P38702	357 aa		3.47	□□□□□ -1.85
SRP1	YNL189W	PKP1	P40530	394 aa		3.47	□□□□□ -1.85
SRP1	YNL189W	IST1	P53843	298 aa	Predicted RBP	3.47	□□□□□ -1.85
SRP1	YNL189W	ADE13	Q05911	482 aa	Known RBP	3.47	□□□□□ -1.85
SRP1	YNL189W	RTT109	Q07794	436 aa		3.47	□□□□□ -1.85
SRP1	YNL189W	TCO89	Q08921	799 aa		3.47	□□□□□ -1.85
SRP1	YNL189W	CLB2	P24869	491 aa		3.46	□□□□□ -1.86
SRP1	YNL189W	YCP4	P25349	247 aa	Known RBP	3.46	□□□□□ -1.86
SRP1	YNL189W	SNU114	P36048	1008 aa	Known RBP	3.46	□□□□□ -1.86
SRP1	YNL189W	YMR124W	P39523	943 aa	Known RBP	3.46	□□□□□ -1.86
SRP1	YNL189W	YIL060W	P40519	144 aa		3.46	□□□□□ -1.86
SRP1	YNL189W	UBP8	P50102	471 aa		3.46	□□□□□ -1.86
SRP1	YNL189W	SGF73	P53165	657 aa		3.46	□□□□□ -1.86
SRP1	YNL189W	SWF1	Q04629	336 aa		3.46	□□□□□ -1.86
SRP1	YNL189W	HUA2	Q12134	243 aa		3.46	□□□□□ -1.86
SRP1	YNL189W	YPR089W	O13585	888 aa		3.45	□□□□□ -1.86
SRP1	YNL189W	ARD1	P07347	238 aa	Predicted RBP	3.45	□□□□□ -1.86
SRP1	YNL189W	AIM17	P23180	465 aa	Known RBP	3.45	□□□□□ -1.86
SRP1	YNL189W	PRE8	P23639	250 aa		3.45	□□□□□ -1.86
SRP1	YNL189W	PGS1	P25578	521 aa		3.45	□□□□□ -1.86
SRP1	YNL189W	SYN8	P31377	255 aa		3.45	□□□□□ -1.86
SRP1	YNL189W	IMP2'	P32351	346 aa		3.45	□□□□□ -1.86
SRP1	YNL189W	SCO2	P38072	301 aa		3.45	□□□□□ -1.86
SRP1	YNL189W	YBL029W	P38201	376 aa		3.45	□□□□□ -1.86
SRP1	YNL189W	RFC1	P38630	861 aa	Known RBP	3.45	□□□□□ -1.86
SRP1	YNL189W	DIA4	P38705	446 aa	Predicted RBP	3.45	□□□□□ -1.86
SRP1	YNL189W	YNG2	P38806	282 aa	Known RBP	3.45	□□□□□ -1.86
SRP1	YNL189W	RPS10B	P46784	105 aa	Known RBP	3.45	□□□□□ -1.86
SRP1	YNL189W	ARE2	P53629	642 aa	Known RBP	3.45	□□□□□ -1.86
SRP1	YNL189W	TIM10	P87108	93 aa		3.45	□□□□□ -1.86
SRP1	YNL189W	IZH1	Q03419	316 aa		3.45	□□□□□ -1.86
SRP1	YNL189W	YML037C	Q03703	340 aa		3.45	□□□□□ -1.86
SRP1	YNL189W	CAC2	Q04199	468 aa		3.45	□□□□□ -1.86
SRP1	YNL189W	IMH1	Q06704	911 aa	Known RBP	3.45	□□□□□ -1.86
SRP1	YNL189W	RPS10A	Q08745	105 aa	Predicted RBP	3.45	□□□□□ -1.86
SRP1	YNL189W	ATX2	Q12067	313 aa		3.45	□□□□□ -1.86
SRP1	YNL189W	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	3.45	□□□□□ -1.86	not detected
SRP1	YNL189W	MED1	Q12321	566 aa		3.45	□□□□□ -1.86
SRP1	YNL189W	OLE1	P21147	510 aa	Known RBP	3.44	□□□□□ -1.86
SRP1	YNL189W	LCB1	P25045	558 aa	Known RBP	3.44	□□□□□ -1.86
SRP1	YNL189W	TOM71	P38825	639 aa	Known RBP	3.44	□□□□□ -1.86
SRP1	YNL189W	ELO1	P39540	310 aa		3.44	□□□□□ -1.86
SRP1	YNL189W	SGN1	P40561	250 aa	Known RBP RIP-Chip data	3.44	□□□□□ -1.86	not detected
SRP1	YNL189W	MRX6	P48564	524 aa		3.44	□□□□□ -1.86
SRP1	YNL189W	LYS20	P48570	428 aa	Known RBP	3.44	□□□□□ -1.86
SRP1	YNL189W	ZDS2	P54786	942 aa		3.44	□□□□□ -1.86
SRP1	YNL189W	VPS72	Q03388	795 aa		3.44	□□□□□ -1.86
SRP1	YNL189W	COG4	Q06096	861 aa		3.44	□□□□□ -1.86
SRP1	YNL189W	POS5	Q06892	414 aa		3.44	□□□□□ -1.86
SRP1	YNL189W	GSH2	Q08220	491 aa		3.44	□□□□□ -1.86

Retrieved 100 of 5,963 RNA–protein pairs in 74.4 ms