RNA–Protein interactions for RNA: YMR153W

NUP53, Transcript of FG-nucleoporin component of central core of nuclear pore complex (NPC), yeastyeast

Gene NUP53, Length 1,428 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP53YMR153W SEO1P39709 593 aa7.6□□□□□ -1.19
NUP53YMR153W GTS1P40956 396 aa7.6□□□□□ -1.19
NUP53YMR153W HXT16P47185 567 aa7.6□□□□□ -1.19
NUP53YMR153W HXT15P54854 567 aa7.6□□□□□ -1.19
NUP53YMR153W EGD1Q02642 157 aaKnown RBP7.6□□□□□ -1.19
NUP53YMR153W VTI1Q04338 217 aa7.6□□□□□ -1.19
NUP53YMR153W NUT2Q06213 157 aa7.6□□□□□ -1.19
NUP53YMR153W HFA1P32874 2273 aa7.59□□□□□ -1.19
NUP53YMR153W ABF1P14164 731 aa7.59□□□□□ -1.19
NUP53YMR153W PRP9P19736 530 aaKnown RBP7.59□□□□□ -1.19
NUP53YMR153W PHO84P25297 587 aaKnown RBP7.59□□□□□ -1.19
NUP53YMR153W MSH1P25846 959 aa7.59□□□□□ -1.19
NUP53YMR153W URA7P28274 579 aaKnown RBP7.59□□□□□ -1.19
NUP53YMR153W SFP1P32432 683 aa7.59□□□□□ -1.19
NUP53YMR153W PIM1P36775 1133 aa7.59□□□□□ -1.19
NUP53YMR153W CEM1P39525 442 aa7.59□□□□□ -1.19
NUP53YMR153W YAL037WP39728 267 aa7.59□□□□□ -1.19
NUP53YMR153W NNF1P47149 201 aa7.59□□□□□ -1.19
NUP53YMR153W PEX8P53248 589 aa7.59□□□□□ -1.19
NUP53YMR153W NPL3Q01560 414 aaKnown RBP RIP-Chip data7.59□□□□□ -1.19not detected
NUP53YMR153W YDR109CQ04585 715 aa7.59□□□□□ -1.19
NUP53YMR153W TEF1P02994 458 aaKnown RBP7.58□□□□□ -1.2
NUP53YMR153W GAL4P04386 881 aa7.58□□□□□ -1.2
NUP53YMR153W YCR099CP25657 155 aa7.58□□□□□ -1.2
NUP53YMR153W TPS2P31688 896 aaKnown RBP7.58□□□□□ -1.2
NUP53YMR153W GCG1P32656 232 aaKnown RBP7.58□□□□□ -1.2
NUP53YMR153W TFC3P34111 1160 aa7.58□□□□□ -1.2
NUP53YMR153W TOM20P35180 183 aa7.58□□□□□ -1.2
NUP53YMR153W BYE1P36106 594 aa7.58□□□□□ -1.2
NUP53YMR153W YSW1P38280 609 aa7.58□□□□□ -1.2
NUP53YMR153W MEF2P39677 819 aa7.58□□□□□ -1.2
NUP53YMR153W YJL107CP42947 387 aa7.58□□□□□ -1.2
NUP53YMR153W ARH1P48360 493 aa7.58□□□□□ -1.2
NUP53YMR153W COG6P53959 839 aa7.58□□□□□ -1.2
NUP53YMR153W RPL22BP56628 122 aaKnown RBP7.58□□□□□ -1.2
NUP53YMR153W BLS1Q06071 122 aa7.58□□□□□ -1.2
NUP53YMR153W GTT2Q12390 233 aa7.58□□□□□ -1.2
NUP53YMR153W CBF1P17106 351 aa7.57□□□□□ -1.2
NUP53YMR153W DAL82P21705 255 aa7.57□□□□□ -1.2
NUP53YMR153W ATP12P22135 325 aa7.57□□□□□ -1.2
NUP53YMR153W VPS34P22543 875 aa7.57□□□□□ -1.2
NUP53YMR153W ARA1P38115 344 aa7.57□□□□□ -1.2
NUP53YMR153W STS1P38637 319 aa7.57□□□□□ -1.2
NUP53YMR153W YEL073CP39974 107 aa7.57□□□□□ -1.2
NUP53YMR153W YER158CP40095 573 aa7.57□□□□□ -1.2
NUP53YMR153W ZRG17P53735 605 aa7.57□□□□□ -1.2
NUP53YMR153W CUE5Q08412 411 aaKnown RBP7.57□□□□□ -1.2
NUP53YMR153W PFA4Q12006 378 aa7.57□□□□□ -1.2
NUP53YMR153W RSC6P25632 483 aa7.56□□□□□ -1.2
NUP53YMR153W GUT2P32191 649 aa7.56□□□□□ -1.2
NUP53YMR153W GDA1P32621 518 aa7.56□□□□□ -1.2
NUP53YMR153W PDR3P33200 976 aa7.56□□□□□ -1.2
NUP53YMR153W RPF2P36160 344 aaKnown RBP7.56□□□□□ -1.2
NUP53YMR153W OLA1P38219 394 aaKnown RBP7.56□□□□□ -1.2
NUP53YMR153W SSU1P41930 458 aa7.56□□□□□ -1.2
NUP53YMR153W BNI4P53858 892 aa7.56□□□□□ -1.2
NUP53YMR153W TFB2Q02939 513 aa7.56□□□□□ -1.2
NUP53YMR153W RSC3Q06639 885 aa7.56□□□□□ -1.2
NUP53YMR153W SKM1Q12469 655 aa7.56□□□□□ -1.2
NUP53YMR153W RMD5Q12508 421 aa7.56□□□□□ -1.2
NUP53YMR153W YIL046W-AQ3E7Z4 54 aa7.56□□□□□ -1.2
NUP53YMR153W NUM1Q00402 2748 aa7.56□□□□□ -1.2
NUP53YMR153W RPB2P08518 1224 aaKnown RBP7.55□□□□□ -1.2
NUP53YMR153W HSP26P15992 214 aaKnown RBP RIP-Chip data7.55□□□□□ -1.2not detected
NUP53YMR153W STE4P18851 423 aa7.55□□□□□ -1.2
NUP53YMR153W YSR3P23501 404 aa7.55□□□□□ -1.2
NUP53YMR153W DPB3P27344 201 aa7.55□□□□□ -1.2
NUP53YMR153W MF(ALPHA)2P32435 120 aa7.55□□□□□ -1.2
NUP53YMR153W SPT16P32558 1035 aaKnown RBP7.55□□□□□ -1.2
NUP53YMR153W YEL043WP32618 956 aa7.55□□□□□ -1.2
NUP53YMR153W RRP1P35178 278 aaPredicted RBP7.55□□□□□ -1.2
NUP53YMR153W SSN3P39073 555 aa7.55□□□□□ -1.2
NUP53YMR153W INA22P40576 216 aa7.55□□□□□ -1.2
NUP53YMR153W YNL320WP42840 284 aa7.55□□□□□ -1.2
NUP53YMR153W ECM9Q02202 377 aa7.55□□□□□ -1.2
NUP53YMR153W NUS1Q12063 375 aa7.55□□□□□ -1.2
NUP53YMR153W RIO1Q12196 484 aaKnown RBP7.55□□□□□ -1.2
NUP53YMR153W YDR061WQ12298 539 aa7.55□□□□□ -1.2
NUP53YMR153W YDR262WQ12331 272 aa7.55□□□□□ -1.2
NUP53YMR153W YOR012WQ12351 137 aa7.55□□□□□ -1.2
NUP53YMR153W PET309P32522 965 aaPredicted RBP7.54□□□□□ -1.2
NUP53YMR153W DEF1P35732 738 aaKnown RBP7.54□□□□□ -1.2
NUP53YMR153W NTR2P36118 322 aaPredicted RBP7.54□□□□□ -1.2
NUP53YMR153W RPC37P36121 282 aa7.54□□□□□ -1.2
NUP53YMR153W GIM4P40005 111 aaKnown RBP7.54□□□□□ -1.2
NUP53YMR153W UTP18P40362 594 aaPredicted RBP7.54□□□□□ -1.2
NUP53YMR153W HST2P53686 357 aa7.54□□□□□ -1.2
NUP53YMR153W HST3P53687 447 aa7.54□□□□□ -1.2
NUP53YMR153W YMR027WQ04371 470 aa7.54□□□□□ -1.2
NUP53YMR153W CDC123Q05791 360 aa7.54□□□□□ -1.2
NUP53YMR153W ADE13Q05911 482 aaKnown RBP7.54□□□□□ -1.2
NUP53YMR153W STP3Q05937 343 aa7.54□□□□□ -1.2
NUP53YMR153W SYT1Q06836 1226 aa7.54□□□□□ -1.2
NUP53YMR153W GPR1Q12361 961 aa7.54□□□□□ -1.2
NUP53YMR153W RAD1P06777 1100 aa7.53□□□□□ -1.2
NUP53YMR153W RNQ1P25367 405 aa7.53□□□□□ -1.2
NUP53YMR153W KAR4P25583 335 aa7.53□□□□□ -1.2
NUP53YMR153W ATP11P32453 318 aa7.53□□□□□ -1.2
NUP53YMR153W DOM34P33309 386 aa7.53□□□□□ -1.2
NUP53YMR153W TIP20P33891 701 aa7.53□□□□□ -1.2
Retrieved 100 of 5,963 RNA–protein pairs in 41.4 ms